FFCP PHASE1:Hg19::chr18:29672676..29672696,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51444 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17765 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=23bp_to_ENST00000257190_5end | |||
|cluster_id=chr18:29672676..29672696,+ | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_4_at_RNF138_5end | |||
|id=chr18:29672676..29672696,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.38e-43!172;CL:0000566!2.38e-43!172;CL:0000988!5.99e-40!182;CL:0000738!9.04e-40!140;CL:0002032!1.50e-39!165;CL:0000837!1.50e-39!165;CL:0002031!5.43e-33!124;CL:0002087!4.84e-31!119;CL:0000763!4.77e-27!112;CL:0000049!4.77e-27!112;CL:0000766!2.53e-25!76;CL:0000860!1.48e-24!45;CL:0002057!2.37e-24!42;CL:0000557!8.00e-22!71;CL:0000839!6.75e-21!70;CL:0002009!2.74e-19!65;CL:0002194!2.85e-18!63;CL:0000576!2.85e-18!63;CL:0000040!2.85e-18!63;CL:0000559!2.85e-18!63;CL:0000542!3.75e-11!53;CL:0000051!3.75e-11!53;CL:0000838!5.25e-11!52;CL:0000219!4.34e-09!390;CL:0000084!9.46e-09!25;CL:0000827!9.46e-09!25;CL:0000791!1.75e-08!18;CL:0000789!1.75e-08!18;CL:0002420!1.75e-08!18;CL:0002419!1.75e-08!18;CL:0000790!1.75e-08!18;CL:0000134!3.55e-08!358;CL:0002320!5.58e-07!365;CL:0000094!6.54e-07!8;CL:0002393!9.42e-07!9;CL:0002397!9.42e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.66e-19;33!CL:0002057;5.66e-19;33!CL:0000576;1.49e-16;48!CL:0000766;3.14e-14;69!CL:0000473;4.74e-14;39!CL:0000234;4.74e-14;39!CL:0002087;1.09e-11;104!CL:0000763;2.35e-10;100!CL:0000791;3.73e-09;18!CL:0000789;3.73e-09;18!CL:0002419;3.73e-09;18!CL:0000738;7.27e-09;136!CL:0000084;7.32e-09;25!CL:0000988;2.33e-08;177!CL:0000094;1.63e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.22e-46,168;CL:0000988,4.55e-44,177;CL:0002032,1.63e-42,161;CL:0000837,1.63e-42,161;CL:0000738,2.09e-42,136;CL:0002031,1.93e-35,120;CL:0002087,2.52e-33,115;CL:0000763,7.72e-30,108;CL:0000049,7.72e-30,108;CL:0000766,3.00e-28,72;CL:0000860,2.60e-26,42;CL:0002057,2.60e-26,42;CL:0000557,2.31e-24,67;CL:0000839,2.51e-23,66;CL:0000473,1.23e-22,48;CL:0000234,1.23e-22,48;CL:0002009,1.41e-21,61;CL:0002194,1.88e-20,59;CL:0000576,1.88e-20,59;CL:0000040,1.88e-20,59;CL:0000559,1.88e-20,59;CL:0000542,2.62e-11,53;CL:0000051,2.62e-11,53;CL:0000838,3.79e-11,52;CL:0000219,1.09e-10,386;CL:0000134,1.75e-09,354;CL:0000791,4.45e-09,18;CL:0000789,4.45e-09,18;CL:0002420,4.45e-09,18;CL:0002419,4.45e-09,18;CL:0000790,4.45e-09,18;CL:0000084,5.58e-09,25;CL:0000827,5.58e-09,25;CL:0002320,3.34e-08,361;CL:0000094,2.26e-07,8;CL:0002393,3.36e-07,9;CL:0002397,3.36e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-19;42!CL:0000790;3.73e-09;18!CL:0000049;1.17e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.18e-21!102;UBERON:0003061!6.18e-21!102;UBERON:0002193!1.19e-19!112;UBERON:0002371!1.39e-16!80;UBERON:0001474!1.60e-16!86;UBERON:0002405!3.22e-13!115;UBERON:0004765!4.51e-13!101;UBERON:0001434!4.51e-13!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.24e-24,98;UBERON:0003061,1.24e-24,98;UBERON:0002193,2.11e-23,108;UBERON:0002405,3.88e-20,93;UBERON:0002371,2.22e-19,76;UBERON:0001474,3.95e-19,82;UBERON:0004765,6.11e-15,90;UBERON:0001434,1.09e-13,100;UBERON:0002384,5.34e-08,371 | |||
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| |||
|short_description=p4@RNF138 | |||
}} |
Latest revision as of 06:10, 19 September 2015
Short description: | p4@RNF138 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF138_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 23bp_to_ENST00000257190_5end |
EntrezGene: | RNF138 |
HGNC: | 17765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.24e-24 | 98 |
blood island | 1.24e-24 | 98 |
hemolymphoid system | 2.11e-23 | 108 |
immune system | 3.88e-20 | 93 |
bone marrow | 2.22e-19 | 76 |
bone element | 3.95e-19 | 82 |
skeletal element | 6.11e-15 | 90 |
skeletal system | 1.09e-13 | 100 |
connective tissue | 5.34e-08 | 371 |