FFCP PHASE1:Hg19::chr18:29672617..29672669,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51444 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17765 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000257190,uc002kxh.2_5end | |||
|cluster_id=chr18:29672617..29672669,+ | |||
|coexpression_cluster_id=C175 | |||
|description=CAGE_peak_2_at_RNF138_5end | |||
|id=chr18:29672617..29672669,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.78e-40!172;CL:0000566!1.78e-40!172;CL:0000988!6.71e-37!182;CL:0002032!7.81e-37!165;CL:0000837!7.81e-37!165;CL:0000738!1.67e-31!140;CL:0002031!1.16e-26!124;CL:0002087!1.83e-26!119;CL:0000763!4.00e-19!112;CL:0000049!4.00e-19!112;CL:0000542!4.71e-17!53;CL:0000051!4.71e-17!53;CL:0000838!7.92e-17!52;CL:0000860!7.46e-15!45;CL:0002057!9.15e-15!42;CL:0000219!1.28e-13!390;CL:0000766!1.95e-13!76;CL:0000134!4.51e-11!358;CL:0000791!5.72e-11!18;CL:0000789!5.72e-11!18;CL:0002420!5.72e-11!18;CL:0002419!5.72e-11!18;CL:0000790!5.72e-11!18;CL:0000084!8.35e-11!25;CL:0000827!8.35e-11!25;CL:0002320!1.05e-10!365;CL:0000557!1.55e-10!71;CL:0000839!2.61e-10!70;CL:0002009!1.38e-09!65;CL:0002194!4.50e-09!63;CL:0000576!4.50e-09!63;CL:0000040!4.50e-09!63;CL:0000559!4.50e-09!63;CL:0000034!2.70e-07!444;CL:0000625!2.78e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.73e-11;25!CL:0000791;4.92e-11;18!CL:0000789;4.92e-11;18!CL:0002419;4.92e-11;18!CL:0002087;1.75e-10;104!CL:0000542;4.88e-10;53!CL:0000576;1.47e-09;48!CL:0000860;1.94e-09;33!CL:0002057;1.94e-09;33!CL:0000763;1.18e-07;100!CL:0000766;2.01e-07;69!CL:0000625;2.51e-07;11!CL:0000988;2.64e-07;177!CL:0000738;3.81e-07;136!CL:0000094;9.60e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.94e-41,168;CL:0000988,1.15e-37,177;CL:0002032,2.30e-37,161;CL:0000837,2.30e-37,161;CL:0000738,4.50e-32,136;CL:0002031,3.20e-27,120;CL:0002087,4.75e-27,115;CL:0000763,1.48e-19,108;CL:0000049,1.48e-19,108;CL:0000542,4.71e-17,53;CL:0000051,4.71e-17,53;CL:0000838,7.92e-17,52;CL:0000860,9.15e-15,42;CL:0002057,9.15e-15,42;CL:0000766,6.62e-14,72;CL:0000219,2.42e-13,386;CL:0000791,5.72e-11,18;CL:0000789,5.72e-11,18;CL:0002420,5.72e-11,18;CL:0002419,5.72e-11,18;CL:0000790,5.72e-11,18;CL:0000557,6.57e-11,67;CL:0000134,7.83e-11,354;CL:0000084,8.35e-11,25;CL:0000827,8.35e-11,25;CL:0000839,1.11e-10,66;CL:0002320,1.82e-10,361;CL:0000473,2.03e-10,48;CL:0000234,2.03e-10,48;CL:0002009,5.89e-10,61;CL:0002194,1.97e-09,59;CL:0000576,1.97e-09,59;CL:0000040,1.97e-09,59;CL:0000559,1.97e-09,59;CL:0000625,2.78e-07,11;CL:0000034,5.25e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000790;4.92e-11;18!CL:0002057;1.06e-10;42!CL:0000051;4.88e-10;53 | |||
|ontology_enrichment_disease=DOID:1240!4.27e-09!39;DOID:2531!4.34e-09!51;DOID:0060083!4.34e-09!51;DOID:8692!1.70e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.22e-07;39!DOID:8692;3.76e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,4.27e-09,39;DOID:2531,4.34e-09,51;DOID:0060083,4.34e-09,51;DOID:8692,1.70e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.58e-14!102;UBERON:0003061!1.58e-14!102;UBERON:0002193!1.59e-12!112;UBERON:0002384!8.39e-11!375;UBERON:0002371!5.68e-09!80;UBERON:0001474!6.63e-09!86;UBERON:0004765!3.90e-07!101;UBERON:0001434!3.90e-07!101;UBERON:0002405!9.85e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.07e-15,98;UBERON:0003061,7.07e-15,98;UBERON:0002193,8.93e-13,108;UBERON:0002384,1.46e-10,371;UBERON:0002371,3.15e-09,76;UBERON:0001474,3.92e-09,82;UBERON:0002405,1.05e-08,93;UBERON:0004765,1.20e-07,90;UBERON:0001434,3.13e-07,100 | |||
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| |||
|short_description=p2@RNF138 | |||
}} |
Latest revision as of 06:09, 19 September 2015
Short description: | p2@RNF138 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RNF138_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_ENST00000257190, uc002kxh.2_5end |
EntrezGene: | RNF138 |
HGNC: | 17765 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.07e-15 | 98 |
blood island | 7.07e-15 | 98 |
hemolymphoid system | 8.93e-13 | 108 |
connective tissue | 1.46e-10 | 371 |
bone marrow | 3.15e-09 | 76 |
bone element | 3.92e-09 | 82 |
immune system | 1.05e-08 | 93 |
skeletal element | 1.20e-07 | 90 |
skeletal system | 3.13e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 4.27e-09 | 39 |
hematologic cancer | 4.34e-09 | 51 |
immune system cancer | 4.34e-09 | 51 |
myeloid leukemia | 1.70e-07 | 31 |