FFCP PHASE1:Hg19::chr2:19558373..19558392,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:19558373..19558392,- to FFCP PHASE1:Hg19::chr2:19558373..19558392,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=130497 | |EntrezGene=130497 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8111 | |HGNC=8111 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000498844_5end | |||
|cluster_id=chr2:19558373..19558392,- | |||
|description=CAGE_peak_1_at_OSR1_5end | |||
|id=chr2:19558373..19558392,- | |||
|ontology_enrichment_celltype=CL:0000055!7.46e-25!180;CL:0000057!4.25e-23!75;CL:0000680!9.47e-13!57;CL:0000056!9.47e-13!57;CL:0000355!9.47e-13!57;CL:0000187!7.04e-12!54;CL:0000183!7.36e-12!59;CL:0000192!5.49e-10!42;CL:0000514!5.49e-10!42;CL:0000393!9.54e-09!60;CL:0000211!9.54e-09!60;CL:0000359!7.08e-08!32;CL:0002334!3.70e-07!12;CL:0002620!5.50e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000057;1.01e-09;73!CL:0000192;1.70e-08;43!CL:0000359;6.96e-08;32!CL:0000187;1.36e-07;55!CL:0002334;1.65e-07;12!CL:0002620;2.42e-07;23!CL:0000134;7.07e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.49e-24,76;CL:0000680,7.31e-14,58;CL:0000056,7.31e-14,58;CL:0000355,7.31e-14,58;CL:0000187,6.21e-13,55;CL:0000192,6.34e-11,43;CL:0000514,6.34e-11,43;CL:0000393,1.02e-09,61;CL:0000211,1.02e-09,61;CL:0000359,2.89e-08,32;CL:0002334,1.67e-07,12;CL:0002620,2.54e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;1.70e-08;43!CL:0000355;7.18e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.79e-20!365;UBERON:0000914!1.14e-18!83;UBERON:0002329!1.14e-18!83;UBERON:0003077!1.14e-18!83;UBERON:0003059!1.14e-18!83;UBERON:0007282!1.14e-18!83;UBERON:0009618!1.14e-18!83;UBERON:0007285!1.14e-18!83;UBERON:0000481!1.95e-17!347;UBERON:0002100!2.41e-17!216;UBERON:0004290!7.85e-17!70;UBERON:0003104!7.94e-16!238;UBERON:0009142!7.94e-16!238;UBERON:0005256!1.28e-15!143;UBERON:0000486!5.31e-15!82;UBERON:0002385!1.52e-14!63;UBERON:0001015!1.52e-14!63;UBERON:0000383!1.52e-14!63;UBERON:0001134!6.69e-14!61;UBERON:0002036!6.69e-14!61;UBERON:0003082!6.69e-14!61;UBERON:0000468!1.12e-13!659;UBERON:0003102!1.62e-13!95;UBERON:0004923!3.31e-11!57;UBERON:0000467!6.82e-11!625;UBERON:0000480!1.12e-10!626;UBERON:0000119!1.42e-09!312;UBERON:0000062!2.41e-09!511;UBERON:0000483!8.69e-09!309;UBERON:0007100!1.39e-08!27;UBERON:0004872!1.50e-08!84;UBERON:0000948!3.63e-08!24;UBERON:0005498!3.63e-08!24;UBERON:0004140!3.63e-08!24;UBERON:0009881!3.63e-08!24;UBERON:0004141!3.63e-08!24;UBERON:0003084!3.63e-08!24;UBERON:0007005!3.63e-08!24;UBERON:0004139!3.63e-08!24;UBERON:0004291!3.63e-08!24;UBERON:0000922!4.16e-08!612;UBERON:0002050!5.71e-08!605;UBERON:0005423!5.71e-08!605;UBERON:0000490!6.17e-08!138;UBERON:0000926!8.12e-08!448;UBERON:0004120!8.12e-08!448;UBERON:0006603!8.12e-08!448;UBERON:0000923!9.71e-08!604;UBERON:0005291!9.71e-08!604;UBERON:0006598!9.71e-08!604;UBERON:0002532!9.71e-08!604;UBERON:0004119!1.94e-07!169;UBERON:0000925!1.94e-07!169;UBERON:0006595!1.94e-07!169;UBERON:0001048!3.39e-07!168;UBERON:0001007!4.18e-07!155;UBERON:0001555!4.18e-07!155;UBERON:0007026!4.18e-07!155;UBERON:0000078!6.17e-07!18;UBERON:0000477!6.22e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.59e-08;25!UBERON:0002385;3.56e-08;31!UBERON:0001015;3.56e-08;31!UBERON:0000383;3.56e-08;31!UBERON:0000948;7.32e-08;22 | |||
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| ||
|short_description=p1@OSR1 | |||
}} | }} |
Latest revision as of 06:01, 19 September 2015
Short description: | p1@OSR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OSR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000498844_5end |
EntrezGene: | OSR1 |
HGNC: | 8111 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.49e-24 | 76 |
muscle precursor cell | 7.31e-14 | 58 |
myoblast | 7.31e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.31e-14 | 58 |
muscle cell | 6.21e-13 | 55 |
smooth muscle cell | 6.34e-11 | 43 |
smooth muscle myoblast | 6.34e-11 | 43 |
electrically responsive cell | 1.02e-09 | 61 |
electrically active cell | 1.02e-09 | 61 |
vascular associated smooth muscle cell | 2.89e-08 | 32 |
preadipocyte | 1.67e-07 | 12 |
skin fibroblast | 2.54e-07 | 23 |