FFCP PHASE1:Hg19::chr5:92919517..92919528,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:92919517..92919528,+ to FFCP PHASE1:Hg19::chr5:92919517..92919528,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7025 | |EntrezGene=7025 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7975 | |HGNC=7975 | ||
|TSSclassifier=strong | |||
|UniProt=P10589 | |UniProt=P10589 | ||
|association_with_transcript=474bp_to_ENST00000327111,NM_005654,uc003kkj.2_5end | |||
|cluster_id=chr5:92919517..92919528,+ | |||
|description=CAGE_peak_25_at_NR2F1_5end | |||
|id=chr5:92919517..92919528,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;5.70e-13;1!CL:0002616;5.70e-13;1!CL:0000669;1.39e-12;4!CL:1000487;2.15e-07;2!CL:0000650;4.04e-07;2!CL:1000500;4.04e-07;2!CL:1000618;4.04e-07;2!CL:1001318;4.04e-07;2!CL:0002549;4.04e-07;2!CL:0002575;4.04e-07;2!CL:0002173;4.04e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002616,3.33e-13,1;CL:0002581,4.23e-13,1;CL:0000669,2.49e-12,4;CL:1000487,2.15e-07,2;CL:0002549,4.69e-07,2;CL:0002575,5.28e-07,2;CL:0000650,5.60e-07,2;CL:1000500,5.60e-07,2;CL:1000618,5.60e-07,2;CL:1001318,5.60e-07,2;CL:0002173,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.70e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!6.37e-15!59;UBERON:0002346!2.49e-13!90;UBERON:0005743!5.56e-13!86;UBERON:0003075!7.85e-13!86;UBERON:0007284!7.85e-13!86;UBERON:0000955!8.92e-13!69;UBERON:0006238!8.92e-13!69;UBERON:0001017!1.61e-12!82;UBERON:0000073!1.62e-11!94;UBERON:0001016!1.62e-11!94;UBERON:0001049!3.58e-11!57;UBERON:0005068!3.58e-11!57;UBERON:0006241!3.58e-11!57;UBERON:0007135!3.58e-11!57;UBERON:0000475!2.40e-09!365;UBERON:0000481!2.52e-09!347;UBERON:0002780!3.99e-09!41;UBERON:0001890!3.99e-09!41;UBERON:0006240!3.99e-09!41;UBERON:0000477!8.41e-09!286;UBERON:0000956!8.84e-09!25;UBERON:0000203!8.84e-09!25;UBERON:0003056!9.07e-09!61;UBERON:0003080!9.25e-09!42;UBERON:0001893!9.89e-09!34;UBERON:0000119!1.04e-08!312;UBERON:0000033!1.34e-08!123;UBERON:0000483!1.41e-08!309;UBERON:0002791!2.66e-08!33;UBERON:0002619!5.57e-08!22;UBERON:0000924!7.06e-08!173;UBERON:0006601!7.06e-08!173;UBERON:0000153!1.20e-07!129;UBERON:0007811!1.20e-07!129;UBERON:0007023!1.51e-07!115;UBERON:0000025!1.52e-07!194;UBERON:0001869!1.59e-07!32;UBERON:0004121!1.87e-07!169;UBERON:0004111!3.58e-07!241;UBERON:0002020!4.61e-07!34;UBERON:0003528!4.61e-07!34;UBERON:0000062!5.44e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005406;3.75e-24;2!UBERON:0002134;5.70e-13;1!UBERON:0000941;5.70e-13;1!UBERON:0001785;5.70e-13;1!UBERON:0002464;5.70e-13;1!UBERON:0004904;5.70e-13;1!UBERON:0001021;5.70e-13;1!UBERON:0005208;5.70e-13;1!UBERON:0004145;5.70e-13;1!UBERON:0005946;5.70e-13;1!UBERON:0005965;5.70e-13;1!UBERON:0002078;5.70e-13;1!UBERON:0005284;2.97e-10;5!UBERON:0002037;7.92e-09;6!UBERON:0004732;1.01e-08;13!UBERON:0001013;3.91e-08;14!UBERON:0003714;4.04e-07;2!UBERON:0005162;4.04e-07;2!UBERON:0000122;4.04e-07;2!UBERON:0005629;4.04e-07;2!UBERON:0002081;4.04e-07;2!UBERON:0002133;4.04e-07;2!UBERON:0003567;4.04e-07;2!UBERON:0003838;4.04e-07;2!UBERON:0003586;4.04e-07;2!UBERON:0005358;4.04e-07;2!UBERON:0005169;4.04e-07;2!UBERON:0002321;4.04e-07;2!UBERON:0001886;4.04e-07;2!UBERON:0005215;4.04e-07;2!UBERON:0002303;4.04e-07;2!UBERON:0004086;4.04e-07;2!UBERON:0002319;4.04e-07;2!UBERON:0005282;4.04e-07;2!UBERON:0005281;4.04e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,1.64e-24,2;UBERON:0002134,4.77e-13,1;UBERON:0005208,4.77e-13,1;UBERON:0005946,4.77e-13,1;UBERON:0005965,4.77e-13,1;UBERON:0002078,4.77e-13,1;UBERON:0000941,5.38e-13,1;UBERON:0001785,5.38e-13,1;UBERON:0002464,5.38e-13,1;UBERON:0004904,5.38e-13,1;UBERON:0001021,5.38e-13,1;UBERON:0003902,5.38e-13,1;UBERON:0005425,5.38e-13,1;UBERON:0005284,3.93e-10,5;UBERON:0002037,7.33e-09,6;UBERON:0006215,7.33e-09,6;UBERON:0004732,9.49e-09,13;UBERON:0001013,3.26e-08,14;UBERON:0002081,3.70e-07,2;UBERON:0002133,3.70e-07,2;UBERON:0010227,3.70e-07,2;UBERON:0003714,3.93e-07,2;UBERON:0005162,3.93e-07,2;UBERON:0000122,3.93e-07,2;UBERON:0005629,4.69e-07,2;UBERON:0005358,4.69e-07,2;UBERON:0001886,4.69e-07,2;UBERON:0004086,4.69e-07,2;UBERON:0005282,4.69e-07,2;UBERON:0005281,4.69e-07,2;UBERON:0003567,5.60e-07,2;UBERON:0003838,5.60e-07,2;UBERON:0003586,5.60e-07,2;UBERON:0005169,5.60e-07,2;UBERON:0002321,5.60e-07,2;UBERON:0005215,5.60e-07,2;UBERON:0002303,5.60e-07,2;UBERON:0002319,5.60e-07,2 | |||
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| ||
|short_description=p25@NR2F1 | |||
}} | }} |
Latest revision as of 06:00, 19 September 2015
Short description: | p25@NR2F1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_NR2F1_5end |
Coexpression cluster: | NA |
Association with transcript: | 474bp_to_ENST00000327111, NM_005654, uc003kkj.2_5end |
EntrezGene: | NR2F1 |
HGNC: | 7975 |
UniProt: | P10589 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal adipocyte cell | 3.33e-13 | 1 |
perirenal preadipocyte | 4.23e-13 | 1 |
pericyte cell | 2.49e-12 | 4 |
smooth muscle cell of prostate | 2.15e-07 | 2 |
fibroblast of choroid plexus | 4.69e-07 | 2 |
central nervous system pericyte | 5.28e-07 | 2 |
mesangial cell | 5.60e-07 | 2 |
kidney interstitial cell | 5.60e-07 | 2 |
juxtaglomerular complex cell | 5.60e-07 | 2 |
renal interstitial pericyte | 5.60e-07 | 2 |
extraglomerular mesangial cell | 5.60e-07 | 2 |