FFCP PHASE1:Hg19::chr10:74114654..74114694,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:74114654..74114694,- to FFCP PHASE1:Hg19::chr10:74114654..74114694,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54788 | |EntrezGene=54788 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14891 | |HGNC=14891 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NXW2 | |UniProt=Q9NXW2 | ||
|association_with_transcript=293bp_to_ENST00000444643_5end | |||
|cluster_id=chr10:74114654..74114694,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_DNAJB12_5end | |||
|id=chr10:74114654..74114694,- | |||
|ontology_enrichment_celltype=CL:0000766!8.15e-34!76;CL:0000557!9.24e-29!71;CL:0002009!5.32e-28!65;CL:0000839!1.73e-27!70;CL:0002194!4.70e-27!63;CL:0000576!4.70e-27!63;CL:0000040!4.70e-27!63;CL:0000559!4.70e-27!63;CL:0002057!2.73e-26!42;CL:0000860!1.43e-25!45;CL:0000763!1.76e-12!112;CL:0000049!1.76e-12!112;CL:0000738!1.12e-10!140;CL:0002031!7.76e-08!124;CL:0002087!5.48e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.67e-20;33!CL:0002057;6.67e-20;33!CL:0000473;8.39e-18;39!CL:0000234;8.39e-18;39!CL:0000576;2.41e-16;48!CL:0000766;3.17e-15;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.48e-34,72;CL:0000557,2.10e-29,67;CL:0002009,1.00e-28,61;CL:0000839,4.25e-28,66;CL:0002194,8.85e-28,59;CL:0000576,8.85e-28,59;CL:0000040,8.85e-28,59;CL:0000559,8.85e-28,59;CL:0000473,2.00e-27,48;CL:0000234,2.00e-27,48;CL:0000860,2.73e-26,42;CL:0002057,2.73e-26,42;CL:0000763,2.07e-12,108;CL:0000049,2.07e-12,108;CL:0000738,1.48e-10,136;CL:0002031,1.03e-07,120;CL:0002087,7.30e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;3.73e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.61e-24!102;UBERON:0003061!1.61e-24!102;UBERON:0002371!2.18e-24!80;UBERON:0002193!3.54e-23!112;UBERON:0001474!5.36e-22!86;UBERON:0007023!6.09e-20!115;UBERON:0002405!3.47e-19!115;UBERON:0004765!4.37e-17!101;UBERON:0001434!4.37e-17!101;UBERON:0003081!1.93e-14!216;UBERON:0000062!5.64e-11!511;UBERON:0000468!8.99e-11!659;UBERON:0000467!4.34e-10!625;UBERON:0000480!8.61e-10!626;UBERON:0002204!2.94e-09!167;UBERON:0000926!3.31e-08!448;UBERON:0004120!3.31e-08!448;UBERON:0006603!3.31e-08!448;UBERON:0002050!1.10e-07!605;UBERON:0005423!1.10e-07!605;UBERON:0000923!1.27e-07!604;UBERON:0005291!1.27e-07!604;UBERON:0006598!1.27e-07!604;UBERON:0002532!1.27e-07!604;UBERON:0000922!4.40e-07!612 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.42e-25,76;UBERON:0002390,1.06e-24,98;UBERON:0003061,1.06e-24,98;UBERON:0002193,2.82e-23,108;UBERON:0001474,3.11e-22,82;UBERON:0002405,9.51e-21,93;UBERON:0007023,7.70e-20,114;UBERON:0004765,6.06e-18,90;UBERON:0001434,3.42e-16,100;UBERON:0003081,2.25e-15,203;UBERON:0000926,3.57e-09,315;UBERON:0004120,3.57e-09,315;UBERON:0006603,3.57e-09,315;UBERON:0002204,9.42e-09,167;UBERON:0000923,6.89e-08,560;UBERON:0010316,6.89e-08,560;UBERON:0005291,6.89e-08,560;UBERON:0006598,6.89e-08,560;UBERON:0010317,6.89e-08,560;UBERON:0002532,6.89e-08,560;UBERON:0002050,2.64e-07,564;UBERON:0000922,6.25e-07,592 | |||
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|short_description=p1@DNAJB12 | |||
}} | }} |
Latest revision as of 05:57, 19 September 2015
Short description: | p1@DNAJB12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DNAJB12_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 293bp_to_ENST00000444643_5end |
EntrezGene: | DNAJB12 |
HGNC: | 14891 |
UniProt: | Q9NXW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.48e-34 | 72 |
granulocyte monocyte progenitor cell | 2.10e-29 | 67 |
macrophage dendritic cell progenitor | 1.00e-28 | 61 |
myeloid lineage restricted progenitor cell | 4.25e-28 | 66 |
monopoietic cell | 8.85e-28 | 59 |
monocyte | 8.85e-28 | 59 |
monoblast | 8.85e-28 | 59 |
promonocyte | 8.85e-28 | 59 |
defensive cell | 2.00e-27 | 48 |
phagocyte | 2.00e-27 | 48 |
classical monocyte | 2.73e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-26 | 42 |
myeloid cell | 2.07e-12 | 108 |
common myeloid progenitor | 2.07e-12 | 108 |
leukocyte | 1.48e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 1.03e-07 | 120 |
nongranular leukocyte | 7.30e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.42e-25 | 76 |
hematopoietic system | 1.06e-24 | 98 |
blood island | 1.06e-24 | 98 |
hemolymphoid system | 2.82e-23 | 108 |
bone element | 3.11e-22 | 82 |
immune system | 9.51e-21 | 93 |
adult organism | 7.70e-20 | 114 |
skeletal element | 6.06e-18 | 90 |
skeletal system | 3.42e-16 | 100 |
lateral plate mesoderm | 2.25e-15 | 203 |
mesoderm | 3.57e-09 | 315 |
mesoderm-derived structure | 3.57e-09 | 315 |
presumptive mesoderm | 3.57e-09 | 315 |
musculoskeletal system | 9.42e-09 | 167 |
germ layer | 6.89e-08 | 560 |
germ layer / neural crest | 6.89e-08 | 560 |
embryonic tissue | 6.89e-08 | 560 |
presumptive structure | 6.89e-08 | 560 |
germ layer / neural crest derived structure | 6.89e-08 | 560 |
epiblast (generic) | 6.89e-08 | 560 |
embryonic structure | 2.64e-07 | 564 |
embryo | 6.25e-07 | 592 |