FFCP PHASE1:Hg19::chr15:77925211..77925290,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21205 | |||
|TSSclassifier=strong | |||
|UniProt=Q96FE5 | |||
|association_with_transcript=-379bp_to_ENST00000355300_5end | |||
|cluster_id=chr15:77925211..77925290,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_LINGO1_5end | |||
|id=chr15:77925211..77925290,- | |||
|ontology_enrichment_celltype=CL:0000133!8.45e-08!59;CL:0000147!3.56e-07!14;CL:0000148!5.01e-07!10;CL:0000541!5.01e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.08e-08;10!CL:0002322;9.84e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.10e-08,10;CL:0000541,1.10e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.84e-15;82 | |||
|ontology_enrichment_disease=DOID:3095!5.49e-08!22;DOID:2994!5.49e-08!22;DOID:171!1.46e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.98e-10;22!DOID:2994;6.98e-10;22!DOID:171;3.88e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,7.04e-10,22;DOID:2994,7.04e-10,22;DOID:171,3.92e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.47e-39!94;UBERON:0001016!3.47e-39!94;UBERON:0005743!1.24e-38!86;UBERON:0001017!6.37e-38!82;UBERON:0001049!6.37e-32!57;UBERON:0005068!6.37e-32!57;UBERON:0006241!6.37e-32!57;UBERON:0007135!6.37e-32!57;UBERON:0000955!1.54e-30!69;UBERON:0006238!1.54e-30!69;UBERON:0002346!2.00e-30!90;UBERON:0007023!2.60e-28!115;UBERON:0003075!1.51e-27!86;UBERON:0007284!1.51e-27!86;UBERON:0002616!5.18e-27!59;UBERON:0003080!1.17e-25!42;UBERON:0002780!2.63e-25!41;UBERON:0001890!2.63e-25!41;UBERON:0006240!2.63e-25!41;UBERON:0001893!1.41e-23!34;UBERON:0000924!1.68e-23!173;UBERON:0006601!1.68e-23!173;UBERON:0002020!3.32e-23!34;UBERON:0003528!3.32e-23!34;UBERON:0002791!9.08e-23!33;UBERON:0001869!2.29e-22!32;UBERON:0004121!3.00e-21!169;UBERON:0003056!1.71e-20!61;UBERON:0002619!1.68e-18!22;UBERON:0000033!3.81e-18!123;UBERON:0000153!4.39e-18!129;UBERON:0007811!4.39e-18!129;UBERON:0000956!4.87e-18!25;UBERON:0000203!4.87e-18!25;UBERON:0001950!5.13e-17!20;UBERON:0000025!4.28e-11!194;UBERON:0000475!7.01e-09!365;UBERON:0000483!1.06e-08!309;UBERON:0000119!1.58e-08!312;UBERON:0004111!1.83e-08!241;UBERON:0003076!1.70e-07!15;UBERON:0003057!1.70e-07!15;UBERON:0001871!2.88e-07!7;UBERON:0000064!3.28e-07!219;UBERON:0002420!3.92e-07!9;UBERON:0007245!3.92e-07!9;UBERON:0010009!3.92e-07!9;UBERON:0010011!3.92e-07!9;UBERON:0000454!3.92e-07!9;UBERON:0000922!6.42e-07!612;UBERON:0000481!9.97e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.24e-27;22!UBERON:0001893;4.29e-26;34!UBERON:0001869;5.53e-26;32!UBERON:0002791;1.06e-25;32!UBERON:0003528;1.20e-25;34!UBERON:0002020;1.20e-25;34!UBERON:0001950;1.36e-24;20!UBERON:0002780;8.87e-24;41!UBERON:0001890;8.87e-24;41!UBERON:0000956;1.34e-22;25!UBERON:0000203;1.34e-22;25!UBERON:0000073;7.57e-21;53!UBERON:0002616;7.57e-21;53!UBERON:0000955;1.19e-16;68!UBERON:0001017;1.60e-16;75!UBERON:0001016;5.64e-16;83!UBERON:0000922;1.70e-14;49!UBERON:0002420;7.48e-10;9!UBERON:0007245;7.48e-10;9!UBERON:0010009;7.48e-10;9!UBERON:0010011;7.48e-10;9!UBERON:0000454;7.48e-10;9!UBERON:0007023;3.14e-09;114!UBERON:0000125;4.35e-09;9!UBERON:0002308;4.35e-09;9!UBERON:0001871;5.45e-09;6!UBERON:0000200;2.50e-08;6!UBERON:0009663;1.54e-07;7!UBERON:0011216;2.06e-07;132!UBERON:0000349;2.55e-07;5!UBERON:0002021;3.14e-07;5!UBERON:0001872;4.38e-07;5!UBERON:0002050;6.49e-07;5!UBERON:0005423;6.49e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.66e-47,89;UBERON:0001017,5.22e-46,81;UBERON:0001049,1.71e-39,56;UBERON:0005068,1.71e-39,56;UBERON:0006241,1.71e-39,56;UBERON:0007135,1.71e-39,56;UBERON:0000073,3.60e-37,53;UBERON:0002616,3.60e-37,53;UBERON:0000955,2.06e-36,68;UBERON:0006238,2.06e-36,68;UBERON:0002780,5.06e-33,41;UBERON:0001890,5.06e-33,41;UBERON:0003080,5.06e-33,41;UBERON:0006240,5.06e-33,41;UBERON:0002346,1.60e-31,86;UBERON:0007023,1.76e-31,114;UBERON:0001893,8.12e-31,34;UBERON:0003528,2.71e-30,34;UBERON:0002020,2.71e-30,34;UBERON:0001869,5.15e-29,32;UBERON:0002791,1.12e-28,32;UBERON:0003075,1.10e-27,82;UBERON:0007284,1.10e-27,82;UBERON:0002619,8.59e-27,22;UBERON:0001950,1.41e-24,20;UBERON:0004121,2.42e-24,171;UBERON:0000924,2.42e-24,171;UBERON:0006601,2.42e-24,171;UBERON:0011216,2.84e-23,223;UBERON:0000956,1.39e-22,25;UBERON:0000203,1.39e-22,25;UBERON:0003056,3.36e-22,61;UBERON:0010371,1.41e-20,104;UBERON:0010314,2.93e-19,132;UBERON:0002420,7.32e-10,9;UBERON:0007245,7.32e-10,9;UBERON:0010009,7.32e-10,9;UBERON:0010011,7.32e-10,9;UBERON:0000454,7.32e-10,9;UBERON:0000125,4.20e-09,9;UBERON:0002308,4.20e-09,9;UBERON:0001871,5.55e-09,6;UBERON:0000200,2.45e-08,6;UBERON:0000025,4.52e-08,192;UBERON:0003076,6.26e-08,15;UBERON:0003057,6.26e-08,15;UBERON:0009663,1.51e-07,7;UBERON:0000349,2.58e-07,5;UBERON:0002021,3.17e-07,5;UBERON:0001872,4.45e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0.737201809504527,0.697801167972428,0.436882744260345,0,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0.572471974262113,0.136874425072884,0.627713197974014,0,0,0,0,0,0.928896739896456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,2.68511379871414,0,0.50133791063589,0,0,0.973269740605272,0.189069634328136,0.221729397462564,0.087834785693126,10.478326039817,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0,0.402829317109147,1.52054421143703,0.732186172644509,0.367663080345869,0,0.0892997282840798,0.898117490504679,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0,1.8672662123986,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0.910161361938026,0,0,0,0,0.438977620880838,0,0,0.567160915800105,0,0.640672166455702,0,0,0,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0.355009592516614,0.10075209822764,0.339121184620975,0,0,0,22.321188221716,31.144495555549,25.330279545555,17.2077351325515,23.2135182805578,13.8691396448815,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,5.3504621473082,0,0,0.982827216677626,0,0,1.10689594688802,1.20097467208968,0,0,0.100528972411631,0,0,0,0,0.463721619900307,0.70445216541493,0.288732895522148,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.144119953416961,0.50496973370552,12.6360809641416,10.3136874900735,16.4104426094066,5.13217338068116,9.56295682140909,0.300343057843917,22.8661146104463,0.672786506072164,0,0,0.129271715757778,7.15312891703765,6.762422020448,0,0,0.771622122786426,0,0.532844358032199,0.142977993658148,0,0,1.62868092146868,0.355391948742546,0,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,0,0,0,0.508189248444927,18.219579540067,9.27946575333234,20.4369843707906,5.10351001322531,0,0,0,0,0,0,0,0,0.157702415033935,0,0.902838299183157,2.27407504055985,0,0,0,0.0868836144680828,0.587403472388222,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0.177561725313127,0,0,0,1.93375119346596,0,0,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,0,0,1.13733384070897,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0.512900250232778,0.328014645699706,0.325378394664303,1.13345112812495,0.732555718546747,0.82509499920588,0.574265537996172,0,0,0.096670718292122,0.462145851343933,0.460511024178389,0.551346289938122,0.107420244868274,0.145016693914229,0.681813019328807,1.24644849905432,0,0,0.127612712494584,0,0,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0,0.196498082026242,0,0,0.633322905892992,0,0,0.349934720244983,0,0.670302275535787,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,27.6674344220155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0.593929361665277,0,78.5376641735375,51.2036675734266,0,0,2.32237948940793,0.597743964753209,0.276283915531148,4.28285671352269,0,0.246169610922139,0,0.449341755736634,1.07412704805365,0,1.08507746200627,0,0,74.6386214493318,38.4059926390064,89.8262091005374,1.82299432759663,0,2.17499872630438,0.1137934482855,0,0.236387681767936,0,35.8673674461403,5.55599983786535,3.54296554325536,14.2303797577981,6.10326945268333,9.28865783422287,10.0486190444206,47.606631182412,0,0,1.53900517007594,0,6.45578932286568,0.0897576444097721,0.217294743844016,0,0,0,0,0,0,13.5357396370308,10.3913143188402,12.5866190231882,1.3282761290693,0,0,0,0.282706142867882,8.00637967045737,0.995261931078505,1.23840590304675,2.4441205797345,0.593042257361244,0.494255755786011,0.417687798021821,13.8172322610388,2.40773294189637,14.0558667435203,0,0.391329237864179,0,1.18375320854817,2.41981432097328,44.3805504364211,5.62360558693543,1.20258735531594,9.12456084295775,0,0,0.313932918407225,1.19472429772959,0,0,0.520679215005393,0,0,3.14508002835654,0,0,0,0,1.06687918137261,1.85337866052151,15.5926711138567,2.46675464364152,0,67.9957948566137,0.977756913674015,0,2.98834192635094,0,9.6540579493251,1.25990255782507,3.77508995296322,0,0.124252535565433,3.53541051925193,1.35904206073614,1.15063130943567,0.101998217636322,2.88950589901519,5.4037825983881,7.39289046016762,0,0,0,2.23425921017803,1.3749625440701,0,0.399358000997982,0.429226048136571,0.223171457441873,4.23255876666375,0,3.49487848582361,0.0787831823072236,0.164831716762333,0,1.77169466726548,0,33.3996469719907,41.2696320518074,7.23389168092586,11.0031549277787,9.13968743664207,0,0,86.325120011053,0,1.73372556058236,6.39945975246977,0,0.179287339332845,0,3.57347663186684,0,0,0,0.864221491201268,0,0,0.246277562248017,0,0.113312091520126,0.146552233678082,3.97520666736664,6.85199668716218,8.33065390978947,0.855434189421647,0,0.213574825135389,0.943225830597996,0,0,0,0,0.638341257770182,0.544017803369474,0,0.306345576763462,0,2.98402782875445,25.6959772190426,44.6616129541185,33.4259784986355,3.44045517414043,5.43552352530576,9.7491352617972,15.9100930176665,0.624902039810533,0.151649117541648,36.2540973602109,2.11739237728355,0,0.28984205722165,0,0.467426619694449,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,1.04349012362347,0.450772826991655,0,0,0,0,0,0,0,0.343395705182793,0,1.26184898228651,0.770479321629213,6.86213092399762,1.82696004375648,0.226705925512272,0,0,0.179088841081487,15.7488738052096,0,3.88716121080938,5.2086790333147,0.168942440653073,0,0.690860683462397,0,36.9150024525121,0.974301544196942,1.19578356282027,2.61704630809351,0.655219697692825,0,0,0,4.37436091745978,0,0,0,0,4.97661808026378,6.26682419387893,4.52864207866064,27.9933376503496,0.655257829152084,20.537636124437,83.3293686798597,59.8609741370981,24.0217314728495,0,0,3.20228299314188,0.352675943690684,0,55.3655920331481,28.339315265117,23.7854449995155,59.483745629819,48.6498373707916,89.5586419411622,43.9213756118635,2.85538840518309,0,8.96569897442827,0,0,0,2.0710797781803,20.28945465586,1.88025820873143,0,1.56302802246618,0,0,0,68.6857235569074,21.0891086625739,27.0759703416551,61.5133358880896,26.2547908328745,0,0,50.1233046424919,0,10.1783348816874,14.4602000554094,0,0.227662191351298,2.21755925406597,0,0,9.92358101461743,77.2830089363477,0,0,1.56986185701028,16.1829057613482,4.76462677633441,7.30526976407596,0,0,7.71946677107889,4.10835390505089,0,3.47716544605159,0,0,0.3414369541879,0.691259661814092,0,0,0,0.423387050190929,0,0,0,0.447421727191169,0,0,0,0.923965261706223,6.95888658802919,2.4285549652957,0.935757853848423,38.5964503813054,2.02164154321867,0.22589216407792,11.5437542582701,0,0.617393264863557,3.93407208907123,11.2876151126765,0.735444965261716,12.4908569963862,3.92616934229891,3.26751040359795,14.3702947378356,0,1.31577485171795,2.51385763096951,0,0.178553938605658,0,0,0,1.37618785021362,8.88705415538998,1.73548718412503,109.2623247368,46.6895238664204,2.645134202577,0.371995018166751,0.462175628631418,0,4.16349201955761,8.52271461316825,0,4.9974526573571,7.48208734743569,6.43264296743914,8.022641257356,1.13668047327359,1.07185652062471,8.29169439458779,10.7570315696371,0.213233981900981,4.99935306073855,0.258355639344024,0.682821857254437,0,1.01835453245064,2.02117188958219,1.08858373948481,1.36893320434112,0.875576689189638,1.57788851863888,2.66128285236811,0.244209805832924,0,0,0.0898252021065869,0,4.15620910221746,8.95171592294625,0.665756774185513,0.603821380773079,0 | |||
|short_description=p1@LINGO1 | |||
}} |
Latest revision as of 05:50, 19 September 2015
Short description: | p1@LINGO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LINGO1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -379bp_to_ENST00000355300_5end |
EntrezGene: | LINGO1 |
HGNC: | 21205 |
UniProt: | Q96FE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.10e-08 | 10 |
melanoblast | 1.10e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 7.04e-10 | 22 |
germ cell cancer | 7.04e-10 | 22 |
neuroectodermal tumor | 3.92e-09 | 10 |