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FFCP PHASE2:Hg19::chr1:75600308..75600316,+: Difference between revisions

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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:431707 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:28838 |TSScl...")
 
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|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:431707
|EntrezGene=431707
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:28838
|HGNC=28838
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:E9PGE3
|UniProt=E9PGE3
|association_with_transcript=-250bp_to_ENST00000356261,uc001dgq.2_5end
|association_with_transcript=-250bp_to_ENST00000356261,uc001dgq.2_5end
|cluster_id=chr1:75600308..75600316,+
|cluster_id=chr1:75600308..75600316,+

Latest revision as of 05:36, 19 September 2015

Short description:p8@LHX8
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_8_at_LHX8_5end
Coexpression cluster:C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary
Association with transcript: -250bp_to_ENST00000356261, uc001dgq.2_5end
EntrezGene:LHX8
HGNC: 28838
UniProt: E9PGE3
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data