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FFCP PHASE1:Hg19::chr1:75600308..75600316,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=431707
|EntrezGene=431707
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=28838
|HGNC=28838
|TSSclassifier=strong
|UniProt=E9PGE3
|UniProt=E9PGE3
|association_with_transcript=-250bp_to_ENST00000356261,uc001dgq.2_5end
|association_with_transcript=-250bp_to_ENST00000356261,uc001dgq.2_5end
|cluster_id=chr1:75600308..75600316,+
|coexpression_cluster_id=C53
|description=CAGE_peak_8_at_LHX8_5end
|description=CAGE_peak_8_at_LHX8_5end
|id=chr1:75600308..75600316,+
|id=chr1:75600308..75600316,+
|ontology_enrichment_celltype=CL:0002552!6.02e-23!5;CL:0002580!4.34e-22!3;CL:0002556!1.80e-11!6;CL:0000057!1.48e-09!75
|ontology_enrichment_celltype=CL:0002552!6.02e-23!5;CL:0002580!4.34e-22!3;CL:0002556!1.80e-11!6;CL:0000057!1.48e-09!75
|ontology_enrichment_celltype_v019=CL:0002617;5.15e-21;2!CL:0002556;6.55e-08;6
|ontology_enrichment_celltype_v019_2=CL:0002617,3.81e-21,2;CL:0002556,6.78e-08,6
|ontology_enrichment_development_v019=UBERON:0003099;1.81e-40;1!UBERON:0003852;1.81e-40;1!UBERON:0005062;3.26e-11;4!UBERON:0007284;3.26e-11;4
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
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|short_description=p8@LHX8
|short_description=p8@LHX8
}}
}}

Latest revision as of 05:36, 19 September 2015

Short description:p8@LHX8
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_8_at_LHX8_5end
Coexpression cluster:C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary
Association with transcript: -250bp_to_ENST00000356261, uc001dgq.2_5end
EntrezGene:LHX8
HGNC: 28838
UniProt: E9PGE3
Genome view:ZENBU


View on UCSC genome browser

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CAGE Expression



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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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