FFCP PHASE1:Hg19::chr3:100428509..100428529,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10342 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11758 | |||
|TSSclassifier=strong | |||
|UniProt=C9JUE0 | |||
|association_with_transcript=52bp_to_ENST00000463568_5end | |||
|cluster_id=chr3:100428509..100428529,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_3_at_TFG_5end | |||
|id=chr3:100428509..100428529,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.37e-23!679;CL:0000004!1.37e-23!679;CL:0000255!1.37e-23!679;CL:0000012!8.34e-23!682;CL:0000055!2.19e-18!180;CL:0000144!7.05e-16!625;CL:0002371!1.87e-14!591;CL:0000220!3.81e-14!246;CL:0002321!1.83e-13!248;CL:0000222!4.56e-12!119;CL:0000057!4.68e-12!75;CL:0000359!1.89e-11!32;CL:0000192!1.14e-10!42;CL:0000514!1.14e-10!42;CL:0000066!7.63e-10!254;CL:0000680!8.18e-10!57;CL:0000056!8.18e-10!57;CL:0000355!8.18e-10!57;CL:0000003!1.11e-09!722;CL:0000063!3.60e-09!578;CL:0000187!4.02e-09!54;CL:0000183!5.03e-09!59;CL:0000151!1.10e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.50e-11;32!CL:0000192;5.35e-08;43!CL:0000151;4.40e-07;36!CL:0000134;7.78e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.57e-13,250;CL:0000057,2.07e-12,76;CL:0000222,6.52e-12,121;CL:0000359,1.52e-11,32;CL:0000192,1.48e-10,43;CL:0000514,1.48e-10,43;CL:0000680,9.22e-10,58;CL:0000056,9.22e-10,58;CL:0000355,9.22e-10,58;CL:0000066,1.40e-09,253;CL:0000187,4.56e-09,55;CL:0000151,6.72e-08,36 | |||
|ontology_enrichment_development_v019=CL:0000514;5.35e-08;43 | |||
|ontology_enrichment_disease=DOID:2394!1.22e-08!14;DOID:193!1.25e-07!29;DOID:120!1.76e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.70e-09;14!DOID:193;1.12e-07;29!DOID:120;1.63e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.04e-08,14;DOID:193,1.09e-07,29;DOID:120,1.55e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.01e-11!42;UBERON:0003509!6.01e-11!42;UBERON:0004572!6.01e-11!42;UBERON:0002049!1.17e-10!79;UBERON:0007798!1.17e-10!79;UBERON:0003914!2.16e-10!118;UBERON:0004872!2.61e-10!84;UBERON:0005256!3.00e-10!143;UBERON:0000914!5.24e-10!83;UBERON:0002329!5.24e-10!83;UBERON:0003077!5.24e-10!83;UBERON:0003059!5.24e-10!83;UBERON:0007282!5.24e-10!83;UBERON:0009618!5.24e-10!83;UBERON:0007285!5.24e-10!83;UBERON:0004573!1.21e-09!33;UBERON:0004571!1.21e-09!33;UBERON:0000490!1.46e-09!138;UBERON:0000926!1.56e-09!448;UBERON:0004120!1.56e-09!448;UBERON:0006603!1.56e-09!448;UBERON:0000486!3.95e-09!82;UBERON:0000055!1.21e-08!69;UBERON:0001981!1.91e-08!60;UBERON:0007500!1.91e-08!60;UBERON:0004537!1.91e-08!60;UBERON:0006965!1.91e-08!60;UBERON:0001134!2.72e-08!61;UBERON:0002036!2.72e-08!61;UBERON:0003082!2.72e-08!61;UBERON:0002385!3.17e-08!63;UBERON:0001015!3.17e-08!63;UBERON:0000383!3.17e-08!63;UBERON:0002100!4.26e-08!216;UBERON:0004535!4.56e-08!110;UBERON:0004290!6.16e-08!70;UBERON:0000468!6.30e-08!659;UBERON:0000480!6.99e-08!626;UBERON:0000467!7.15e-08!625;UBERON:0001009!9.39e-08!113;UBERON:0003104!1.27e-07!238;UBERON:0009142!1.27e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.02e-08;33!UBERON:0004571;1.02e-08;33!UBERON:0001637;1.09e-07;42!UBERON:0003509;1.09e-07;42!UBERON:0004572;1.09e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.88e-11,42;UBERON:0003509,4.88e-11,42;UBERON:0004572,4.88e-11,42;UBERON:0002049,2.12e-10,78;UBERON:0007798,2.12e-10,78;UBERON:0003914,3.03e-10,117;UBERON:0004872,6.06e-10,83;UBERON:0004573,1.01e-09,33;UBERON:0004571,1.01e-09,33;UBERON:0000490,1.93e-09,148;UBERON:0005256,3.66e-09,122;UBERON:0000486,4.34e-09,83;UBERON:0000055,2.20e-08,68;UBERON:0003104,2.41e-08,160;UBERON:0009142,2.41e-08,160;UBERON:0001134,3.19e-08,62;UBERON:0002036,3.19e-08,62;UBERON:0003082,3.19e-08,62;UBERON:0007500,3.58e-08,59;UBERON:0001981,3.58e-08,59;UBERON:0004537,3.58e-08,59;UBERON:0006965,3.58e-08,59;UBERON:0002385,3.69e-08,64;UBERON:0001015,3.69e-08,64;UBERON:0000383,3.69e-08,64;UBERON:0007524,5.37e-08,73;UBERON:0004535,5.75e-08,109;UBERON:0002329,6.95e-08,71;UBERON:0003059,6.95e-08,71;UBERON:0007282,6.95e-08,71;UBERON:0004290,6.95e-08,71;UBERON:0009618,6.95e-08,71;UBERON:0003077,1.22e-07,72;UBERON:0007285,1.22e-07,72;UBERON:0001009,1.24e-07,112;UBERON:0007503,1.62e-07,78;UBERON:0003102,3.96e-07,99;UBERON:0002100,8.13e-07,199 | |||
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| |||
|short_description=p3@TFG | |||
}} |
Latest revision as of 05:31, 19 September 2015
Short description: | p3@TFG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFG_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 52bp_to_ENST00000463568_5end |
EntrezGene: | TFG |
HGNC: | 11758 |
UniProt: | C9JUE0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.57e-13 | 250 |
fibroblast | 2.07e-12 | 76 |
mesodermal cell | 6.52e-12 | 121 |
vascular associated smooth muscle cell | 1.52e-11 | 32 |
smooth muscle cell | 1.48e-10 | 43 |
smooth muscle myoblast | 1.48e-10 | 43 |
muscle precursor cell | 9.22e-10 | 58 |
myoblast | 9.22e-10 | 58 |
multi-potent skeletal muscle stem cell | 9.22e-10 | 58 |
epithelial cell | 1.40e-09 | 253 |
muscle cell | 4.56e-09 | 55 |
secretory cell | 6.72e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.04e-08 | 14 |
reproductive organ cancer | 1.09e-07 | 29 |
female reproductive organ cancer | 1.55e-07 | 27 |