FFCP PHASE1:Hg19::chr12:54651599..54651610,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23468 | |EntrezGene=23468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1555 | |HGNC=1555 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-164bp_to_AB528597,EU446624,EU446784_5end | |association_with_transcript=-164bp_to_AB528597,EU446624,EU446784_5end | ||
|cluster_id=chr12:54651599..54651610,- | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_40_at_CBX5_5end | |description=CAGE_peak_40_at_CBX5_5end | ||
|id=chr12:54651599..54651610,- | |id=chr12:54651599..54651610,- | ||
|ontology_enrichment_celltype=CL:0000667!9.71e-19!6;CL:0000058!9.71e-19!6;CL:0000138!9.71e-19!6;CL:0000153!3.32e-12!9;CL:0000447!3.32e-12!9;CL:0000327!8.25e-10!14 | |ontology_enrichment_celltype=CL:0000667!9.71e-19!6;CL:0000058!9.71e-19!6;CL:0000138!9.71e-19!6;CL:0000153!3.32e-12!9;CL:0000447!3.32e-12!9;CL:0000327!8.25e-10!14 | ||
|ontology_enrichment_celltype_v019=CL:0000138;8.67e-59;6!CL:0000153;1.98e-39;9!CL:0000447;1.98e-39;9!CL:0000327;6.67e-24;15!CL:0000499;4.96e-13;28!CL:0000151;1.55e-09;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.47e-59,6;CL:0000138,7.47e-59,6;CL:0000153,1.80e-39,9;CL:0000447,1.80e-39,9;CL:0000327,6.29e-24,15;CL:0000499,4.81e-13,28;CL:0000151,3.10e-10,36 | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.61e-30;3!UBERON:0003057;5.61e-30;3!UBERON:0003918;8.09e-10;10!UBERON:0007687;8.09e-10;10 | |||
|ontology_enrichment_disease=DOID:3350!2.32e-07!2 | |ontology_enrichment_disease=DOID:3350!2.32e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:6193;2.09e-23;1!DOID:3350;2.07e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.10e-23,1;DOID:3350,2.07e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.86e-28!57;UBERON:0005068!2.86e-28!57;UBERON:0006241!2.86e-28!57;UBERON:0007135!2.86e-28!57;UBERON:0001017!4.38e-22!82;UBERON:0005743!1.03e-20!86;UBERON:0002616!2.41e-20!59;UBERON:0000955!2.03e-19!69;UBERON:0006238!2.03e-19!69;UBERON:0002020!1.67e-18!34;UBERON:0003528!1.67e-18!34;UBERON:0000073!4.73e-18!94;UBERON:0001016!4.73e-18!94;UBERON:0002780!6.14e-17!41;UBERON:0001890!6.14e-17!41;UBERON:0006240!6.14e-17!41;UBERON:0002791!6.45e-17!33;UBERON:0002346!9.67e-17!90;UBERON:0002298!1.63e-16!8;UBERON:0003080!1.95e-16!42;UBERON:0003075!2.06e-16!86;UBERON:0007284!2.06e-16!86;UBERON:0001893!2.56e-16!34;UBERON:0003076!4.38e-14!15;UBERON:0003057!4.38e-14!15;UBERON:0001869!5.84e-13!32;UBERON:0002619!4.83e-12!22;UBERON:0001950!4.59e-11!20;UBERON:0002420!4.98e-11!9;UBERON:0007245!4.98e-11!9;UBERON:0010009!4.98e-11!9;UBERON:0010011!4.98e-11!9;UBERON:0000454!4.98e-11!9;UBERON:0002308!7.95e-11!9;UBERON:0000125!7.95e-11!9;UBERON:0000956!2.20e-10!25;UBERON:0000203!2.20e-10!25;UBERON:0002240!3.60e-10!3;UBERON:0003056!4.96e-10!61;UBERON:0007023!1.13e-09!115;UBERON:0001896!2.20e-09!3;UBERON:0005290!2.20e-09!3;UBERON:0010096!2.20e-09!3;UBERON:0006331!2.92e-09!3;UBERON:0002771!3.99e-09!3;UBERON:0000349!5.83e-09!5;UBERON:0001871!9.00e-09!7;UBERON:0000025!1.16e-08!194;UBERON:0000988!1.31e-08!3;UBERON:0000153!2.10e-08!129;UBERON:0007811!2.10e-08!129;UBERON:0000033!3.11e-08!123;UBERON:0004733!8.62e-08!12;UBERON:0002028!8.62e-08!12;UBERON:0007277!8.62e-08!12;UBERON:0000200!1.75e-07!6;UBERON:0000924!2.58e-07!173;UBERON:0006601!2.58e-07!173;UBERON:0004732!3.88e-07!13;UBERON:0000475!5.41e-07!365;UBERON:0004121!5.55e-07!169;UBERON:0001875!5.83e-07!2;UBERON:0006514!5.83e-07!2;UBERON:0001876!8.27e-07!2;UBERON:0009663!9.91e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;5.61e-30;3!UBERON:0005174;5.61e-30;3!UBERON:0001137;5.61e-30;3!UBERON:0000489;1.57e-12;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.84e-30,3;UBERON:0005174,4.84e-30,3;UBERON:0001137,4.84e-30,3;UBERON:0000489,9.76e-12,31;UBERON:0003076,8.58e-07,15;UBERON:0003057,8.58e-07,15 | |||
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| ||
|short_description=p40@CBX5 | |short_description=p40@CBX5 | ||
}} | }} |
Latest revision as of 05:27, 19 September 2015
Short description: | p40@CBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_40_at_CBX5_5end |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | -164bp_to_AB528597, EU446624, EU446784_5end |
EntrezGene: | CBX5 |
HGNC: | 1555 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.47e-59 | 6 |
chondrocyte | 7.47e-59 | 6 |
GAG secreting cell | 1.80e-39 | 9 |
carbohydrate secreting cell | 1.80e-39 | 9 |
extracellular matrix secreting cell | 6.29e-24 | 15 |
stromal cell | 4.81e-13 | 28 |
secretory cell | 3.10e-10 | 36 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.84e-30 | 3 |
dorsal region element | 4.84e-30 | 3 |
dorsum | 4.84e-30 | 3 |
cavitated compound organ | 9.76e-12 | 31 |
posterior neural tube | 8.58e-07 | 15 |
chordal neural plate | 8.58e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.10e-23 | 1 |
mesenchymal cell neoplasm | 2.07e-12 | 2 |