FFCP PHASE1:Hg19::chr4:88244010..88244045,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=345275 | |EntrezGene=345275 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18685 | |HGNC=18685 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000302219_5end | |association_with_transcript=0bp_to_ENST00000302219_5end | ||
|cluster_id=chr4:88244010..88244045,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_HSD17B13_5end | |description=CAGE_peak_1_at_HSD17B13_5end | ||
|id=chr4:88244010..88244045,- | |id=chr4:88244010..88244045,- | ||
|ontology_enrichment_celltype=CL:0002622!5.73e-10!3 | |ontology_enrichment_celltype=CL:0002622!5.73e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:0000136;7.30e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.05e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.38e-14;2!UBERON:0004874;1.88e-08;1!UBERON:0010227;4.11e-08;1 | |||
|ontology_enrichment_disease=DOID:114!2.89e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:0060084;4.51e-10;3!DOID:127;4.51e-10;3!DOID:0060072;9.14e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.73e-10,3;DOID:127,4.73e-10,3;DOID:0060072,9.46e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.11e-23!115;UBERON:0003101!3.45e-08!22;UBERON:0000079!3.45e-08!22;UBERON:0003127!5.40e-08!2;UBERON:0000162!1.22e-07!14;UBERON:0001353!1.22e-07!14;UBERON:0000163!1.22e-07!14;UBERON:0006866!1.22e-07!14;UBERON:0000164!1.22e-07!14;UBERON:0000931!1.22e-07!14;UBERON:0000341!1.31e-07!2;UBERON:0001046!2.38e-07!19;UBERON:0004122!4.33e-07!15;UBERON:0002367!4.59e-07!11;UBERON:0010147!4.59e-07!11;UBERON:0009846!4.59e-07!11;UBERON:0003353!4.59e-07!11;UBERON:0004902!4.59e-07!11;UBERON:0003820!4.59e-07!11;UBERON:0009847!4.59e-07!11;UBERON:0004921!5.21e-07!129;UBERON:0004185!5.21e-07!129;UBERON:0000077!5.41e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;1.88e-08;1!UBERON:0008811;1.88e-08;1!UBERON:0002079;4.11e-08;1!UBERON:0006834;6.24e-08;1!UBERON:0002146;6.24e-08;1!UBERON:0002171;6.24e-08;1!UBERON:0005623;6.24e-08;1!UBERON:0006518;6.24e-08;1!UBERON:0008949;6.24e-08;1!UBERON:0000101;6.24e-08;1!UBERON:0002167;6.24e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.54e-14,114;UBERON:0000989,1.88e-08,1;UBERON:0008811,1.88e-08,1;UBERON:0006258,1.88e-08,1;UBERON:0005876,1.88e-08,1;UBERON:0004874,1.88e-08,1;UBERON:0002079,3.57e-08,1;UBERON:0006834,5.43e-08,1;UBERON:0002146,6.24e-08,1;UBERON:0005623,6.24e-08,1;UBERON:0002171,6.68e-08,1;UBERON:0006518,6.68e-08,1;UBERON:0008949,6.68e-08,1;UBERON:0000101,6.68e-08,1;UBERON:0002167,6.68e-08,1 | |||
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| ||
|short_description=p1@HSD17B13 | |short_description=p1@HSD17B13 | ||
}} | }} |
Latest revision as of 05:23, 19 September 2015
Short description: | p1@HSD17B13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSD17B13_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000302219_5end |
EntrezGene: | HSD17B13 |
HGNC: | 18685 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.05e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.54e-14 | 114 |
penis | 1.88e-08 | 1 |
intromittent organ | 1.88e-08 | 1 |
lateral plate mesenchyme | 1.88e-08 | 1 |
undifferentiated genital tubercle | 1.88e-08 | 1 |
somatopleure | 1.88e-08 | 1 |
left cardiac atrium | 3.57e-08 | 1 |
uterus or analog | 5.43e-08 | 1 |
pulmonary valve | 6.24e-08 | 1 |
semi-lunar valve | 6.24e-08 | 1 |
lower lobe of right lung | 6.68e-08 | 1 |
right lung lobe | 6.68e-08 | 1 |
lower lobe of lung | 6.68e-08 | 1 |
lobe of lung | 6.68e-08 | 1 |
right lung | 6.68e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.73e-10 | 3 |
leiomyoma | 4.73e-10 | 3 |
benign neoplasm | 9.46e-08 | 4 |