FFCP PHASE1:Hg19::chr3:58223326..58223335,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57406 | |EntrezGene=57406 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21398 | |HGNC=21398 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BV23,F5H7L1 | |UniProt=Q9BV23,F5H7L1 | ||
|association_with_transcript=67bp_to_ENST00000295962,ENST00000511761,NM_020676,uc003djr.2,uc003djs.3,uc003djt.3_5end | |association_with_transcript=67bp_to_ENST00000295962,ENST00000511761,NM_020676,uc003djr.2,uc003djs.3,uc003djt.3_5end | ||
|cluster_id=chr3:58223326..58223335,+ | |||
|coexpression_cluster_id=C145 | |coexpression_cluster_id=C145 | ||
|description=CAGE_peak_5_at_ABHD6_5end | |description=CAGE_peak_5_at_ABHD6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;1.53e-44;2!CL:0001016;1.53e-44;2!CL:0000453;1.62e-18;5!CL:0000840;1.31e-15;5!CL:0000990;9.69e-11;8!CL:0000451;5.87e-09;10!CL:0002567;1.40e-08;3 | |ontology_enrichment_celltype_v019=CL:0001014;1.53e-44;2!CL:0001016;1.53e-44;2!CL:0000453;1.62e-18;5!CL:0000840;1.31e-15;5!CL:0000990;9.69e-11;8!CL:0000451;5.87e-09;10!CL:0002567;1.40e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.91e-44,2;CL:0001016,1.91e-44,2;CL:0000453,1.77e-18,5;CL:0000840,1.41e-15,5;CL:0001029,1.41e-15,5;CL:0000990,1.02e-10,8;CL:0000451,6.10e-09,10;CL:0002567,1.30e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;8.36e-36;10!DOID:3095;1.42e-16;22!DOID:2994;1.42e-16;22 | |ontology_enrichment_disease_v019=DOID:171;8.36e-36;10!DOID:3095;1.42e-16;22!DOID:2994;1.42e-16;22 | ||
|ontology_enrichment_disease_v019_2=DOID:171,8.00e-36,10;DOID:3095,1.39e-16,22;DOID:2994,1.39e-16,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.73e-18!115;UBERON:0001049!9.30e-15!57;UBERON:0005068!9.30e-15!57;UBERON:0006241!9.30e-15!57;UBERON:0007135!9.30e-15!57;UBERON:0002780!9.62e-15!41;UBERON:0001890!9.62e-15!41;UBERON:0006240!9.62e-15!41;UBERON:0003080!2.98e-14!42;UBERON:0002616!7.09e-14!59;UBERON:0002020!7.37e-14!34;UBERON:0003528!7.37e-14!34;UBERON:0001893!1.88e-13!34;UBERON:0001869!4.02e-13!32;UBERON:0000955!1.03e-12!69;UBERON:0006238!1.03e-12!69;UBERON:0000956!1.36e-12!25;UBERON:0000203!1.36e-12!25;UBERON:0002791!1.40e-12!33;UBERON:0005743!1.13e-11!86;UBERON:0000073!1.29e-11!94;UBERON:0001016!1.29e-11!94;UBERON:0001017!1.36e-11!82;UBERON:0002619!5.73e-11!22;UBERON:0002346!2.31e-10!90;UBERON:0003056!4.72e-09!61;UBERON:0001950!1.15e-08!20;UBERON:0003075!2.96e-08!86;UBERON:0007284!2.96e-08!86;UBERON:0000153!4.04e-08!129;UBERON:0007811!4.04e-08!129;UBERON:0000033!5.90e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!4.73e-18!115;UBERON:0001049!9.30e-15!57;UBERON:0005068!9.30e-15!57;UBERON:0006241!9.30e-15!57;UBERON:0007135!9.30e-15!57;UBERON:0002780!9.62e-15!41;UBERON:0001890!9.62e-15!41;UBERON:0006240!9.62e-15!41;UBERON:0003080!2.98e-14!42;UBERON:0002616!7.09e-14!59;UBERON:0002020!7.37e-14!34;UBERON:0003528!7.37e-14!34;UBERON:0001893!1.88e-13!34;UBERON:0001869!4.02e-13!32;UBERON:0000955!1.03e-12!69;UBERON:0006238!1.03e-12!69;UBERON:0000956!1.36e-12!25;UBERON:0000203!1.36e-12!25;UBERON:0002791!1.40e-12!33;UBERON:0005743!1.13e-11!86;UBERON:0000073!1.29e-11!94;UBERON:0001016!1.29e-11!94;UBERON:0001017!1.36e-11!82;UBERON:0002619!5.73e-11!22;UBERON:0002346!2.31e-10!90;UBERON:0003056!4.72e-09!61;UBERON:0001950!1.15e-08!20;UBERON:0003075!2.96e-08!86;UBERON:0007284!2.96e-08!86;UBERON:0000153!4.04e-08!129;UBERON:0007811!4.04e-08!129;UBERON:0000033!5.90e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.39e-50;4!UBERON:0000923;3.39e-50;4!UBERON:0010316;3.39e-50;4!UBERON:0005291;3.39e-50;4!UBERON:0002050;2.38e-40;5!UBERON:0005423;2.38e-40;5!UBERON:0001954;3.24e-12;2!UBERON:0003022;3.24e-12;2!UBERON:0002421;3.24e-12;2!UBERON:0002600;3.24e-12;2 | |ontology_enrichment_uberon_v019=UBERON:0002346;3.39e-50;4!UBERON:0000923;3.39e-50;4!UBERON:0010316;3.39e-50;4!UBERON:0005291;3.39e-50;4!UBERON:0002050;2.38e-40;5!UBERON:0005423;2.38e-40;5!UBERON:0001954;3.24e-12;2!UBERON:0003022;3.24e-12;2!UBERON:0002421;3.24e-12;2!UBERON:0002600;3.24e-12;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,3.24e-12,2;UBERON:0003022,3.24e-12,2;UBERON:0002421,3.24e-12,2;UBERON:0002600,3.24e-12,2 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.229240217243854,0.164201178899891,0.236132343941038,0.393364276848904,0,0.154816123316076,0,0,0,0.0774672005803016,0,0,0,0.200544447470142,0,0,0,0.257575567634187,0,0,0,0.232429036905685,0.822335776043652,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0,0.306083892370903,0.641858054152187,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.261958150995425,0,0,0.649094787309367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,2.04123229368278,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0.922255617552241,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0.379864775735272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,1.59045937961861,0.136203406111576,0,0,0,4.27450393947851,1.5476039091159,0.121499113316049,0,0,0.104909176269996,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.387848869084652,0.13223260174269,0,0,0.106787412567695,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.124192805882767,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3231478136245,0,0,2.33832412111851,10.2866684334972,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0.196295437002051,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,5.27613733078862,0,0.535701835878287,0,0,0,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0.691259661814092,0,0.118332000730565,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.594092800654172,0,0,0.469919589899268,0.257831551894309,0.699588091474503,0,0,0,0,0,0,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0.639701945702943,0.23806443146374,0.0645889098360061,0,0.112131862580613,0,0,0,0,0,0.502055437748735,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p5@ABHD6 | |short_description=p5@ABHD6 | ||
}} | }} |
Latest revision as of 05:23, 19 September 2015
Short description: | p5@ABHD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ABHD6_5end |
Coexpression cluster: | C145_neuroblastoma_peripheral_neuroectodermal_neuroepithelioma_carcinoid_adult_extraskeletal |
Association with transcript: | 67bp_to_ENST00000295962, ENST00000511761, NM_020676, uc003djr.2, uc003djs.3, uc003djt.3_5end |
EntrezGene: | ABHD6 |
HGNC: | 21398 |
UniProt: | Q9BV23F5H7L1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.91e-44 | 2 |
immature CD1a-positive Langerhans cell | 1.91e-44 | 2 |
Langerhans cell | 1.77e-18 | 5 |
immature conventional dendritic cell | 1.41e-15 | 5 |
common dendritic progenitor | 1.41e-15 | 5 |
conventional dendritic cell | 1.02e-10 | 8 |
dendritic cell | 6.10e-09 | 10 |
light melanocyte | 1.30e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 3.24e-12 | 2 |
lobe parts of cerebral cortex | 3.24e-12 | 2 |
hippocampal formation | 3.24e-12 | 2 |
limbic lobe | 3.24e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 8.00e-36 | 10 |
germ cell and embryonal cancer | 1.39e-16 | 22 |
germ cell cancer | 1.39e-16 | 22 |