FFCP PHASE1:Hg19::chr4:87928166..87928186,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4299 | |EntrezGene=4299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |HGNC=7135 | ||
|TSSclassifier=strong | |||
|UniProt=P51825 | |UniProt=P51825 | ||
|association_with_transcript=13bp_to_NM_005935,uc003hqj.3,uc003hqk.3,uc011cda.1_5end | |association_with_transcript=13bp_to_NM_005935,uc003hqj.3,uc003hqk.3,uc011cda.1_5end | ||
|cluster_id=chr4:87928166..87928186,+ | |||
|description=CAGE_peak_12_at_AFF1_5end | |description=CAGE_peak_12_at_AFF1_5end | ||
|id=chr4:87928166..87928186,+ | |id=chr4:87928166..87928186,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.46e-32!172;CL:0000566!1.46e-32!172;CL:0002032!3.70e-31!165;CL:0000837!3.70e-31!165;CL:0000988!1.10e-29!182;CL:0000738!2.72e-22!140;CL:0000763!5.13e-20!112;CL:0000049!5.13e-20!112;CL:0002031!6.87e-20!124;CL:0002087!7.28e-18!119;CL:0000766!1.03e-11!76;CL:0000839!1.20e-10!70;CL:0000542!2.39e-10!53;CL:0000051!2.39e-10!53;CL:0000838!5.29e-10!52;CL:0000557!6.21e-10!71;CL:0000236!1.12e-08!14;CL:0000945!2.92e-08!24;CL:0000826!2.92e-08!24;CL:0002194!7.42e-08!63;CL:0000576!7.42e-08!63;CL:0000040!7.42e-08!63;CL:0000559!7.42e-08!63;CL:0002009!1.13e-07!65;CL:0002057!1.81e-07!42 | |ontology_enrichment_celltype=CL:0000037!1.46e-32!172;CL:0000566!1.46e-32!172;CL:0002032!3.70e-31!165;CL:0000837!3.70e-31!165;CL:0000988!1.10e-29!182;CL:0000738!2.72e-22!140;CL:0000763!5.13e-20!112;CL:0000049!5.13e-20!112;CL:0002031!6.87e-20!124;CL:0002087!7.28e-18!119;CL:0000766!1.03e-11!76;CL:0000839!1.20e-10!70;CL:0000542!2.39e-10!53;CL:0000051!2.39e-10!53;CL:0000838!5.29e-10!52;CL:0000557!6.21e-10!71;CL:0000236!1.12e-08!14;CL:0000945!2.92e-08!24;CL:0000826!2.92e-08!24;CL:0002194!7.42e-08!63;CL:0000576!7.42e-08!63;CL:0000040!7.42e-08!63;CL:0000559!7.42e-08!63;CL:0002009!1.13e-07!65;CL:0002057!1.81e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.63e-15;33!CL:0002057;2.63e-15;33!CL:0000236;1.03e-11;13!CL:0000473;9.30e-11;39!CL:0000234;9.30e-11;39!CL:0000763;5.45e-10;100!CL:0000945;7.39e-09;24!CL:0000576;3.23e-08;48!CL:0002087;2.65e-07;104!CL:0000738;4.00e-07;136!CL:0000988;6.55e-07;177!CL:0000766;7.83e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.38e-39,168;CL:0002032,5.02e-38,161;CL:0000837,5.02e-38,161;CL:0000988,3.98e-36,177;CL:0000763,4.78e-28,108;CL:0000049,4.78e-28,108;CL:0000738,3.93e-26,136;CL:0002031,6.05e-25,120;CL:0002087,2.87e-21,115;CL:0000766,1.71e-17,72;CL:0000839,1.36e-16,66;CL:0000557,7.66e-16,67;CL:0002009,3.12e-12,61;CL:0000236,3.39e-12,14;CL:0002194,3.50e-12,59;CL:0000576,3.50e-12,59;CL:0000040,3.50e-12,59;CL:0000559,3.50e-12,59;CL:0000860,1.11e-10,42;CL:0002057,1.11e-10,42;CL:0000473,1.09e-09,48;CL:0000234,1.09e-09,48;CL:0000542,3.17e-09,53;CL:0000051,3.17e-09,53;CL:0000945,5.11e-09,24;CL:0000826,5.11e-09,24;CL:0000838,8.67e-09,52;CL:0000134,2.04e-07,354;CL:0002320,5.49e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000049;1.02e-08;108!CL:0002057;2.45e-08;42 | |||
|ontology_enrichment_disease=DOID:1240!2.34e-11!39;DOID:8692!8.73e-10!31;DOID:2531!2.48e-09!51;DOID:0060083!2.48e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;7.97e-12;31!DOID:1240;1.02e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.18e-13,39;DOID:8692,2.49e-12,31;DOID:2531,1.56e-09,51;DOID:0060083,1.56e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!7.38e-12!112;UBERON:0002390!4.33e-11!102;UBERON:0003061!4.33e-11!102;UBERON:0007023!1.73e-08!115;UBERON:0002405!2.64e-08!115;UBERON:0002371!1.01e-07!80;UBERON:0001474!3.33e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.76e-17,98;UBERON:0003061,8.76e-17,98;UBERON:0002193,3.23e-16,108;UBERON:0002405,1.21e-13,93;UBERON:0002371,8.65e-13,76;UBERON:0001474,2.21e-11,82;UBERON:0004765,4.17e-09,90;UBERON:0003081,4.63e-07,203;UBERON:0001434,6.80e-07,100;UBERON:0002384,7.44e-07,371 | |||
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| ||
|short_description=p12@AFF1 | |short_description=p12@AFF1 | ||
}} | }} |
Latest revision as of 04:51, 19 September 2015
Short description: | p12@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_AFF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_NM_005935, uc003hqj.3, uc003hqk.3, uc011cda.1_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | P51825 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.38e-39 | 168 |
hematopoietic oligopotent progenitor cell | 5.02e-38 | 161 |
hematopoietic multipotent progenitor cell | 5.02e-38 | 161 |
hematopoietic cell | 3.98e-36 | 177 |
myeloid cell | 4.78e-28 | 108 |
common myeloid progenitor | 4.78e-28 | 108 |
leukocyte | 3.93e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 6.05e-25 | 120 |
nongranular leukocyte | 2.87e-21 | 115 |
myeloid leukocyte | 1.71e-17 | 72 |
myeloid lineage restricted progenitor cell | 1.36e-16 | 66 |
granulocyte monocyte progenitor cell | 7.66e-16 | 67 |
macrophage dendritic cell progenitor | 3.12e-12 | 61 |
B cell | 3.39e-12 | 14 |
monopoietic cell | 3.50e-12 | 59 |
monocyte | 3.50e-12 | 59 |
monoblast | 3.50e-12 | 59 |
promonocyte | 3.50e-12 | 59 |
classical monocyte | 1.11e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-10 | 42 |
defensive cell | 1.09e-09 | 48 |
phagocyte | 1.09e-09 | 48 |
lymphocyte | 3.17e-09 | 53 |
common lymphoid progenitor | 3.17e-09 | 53 |
lymphocyte of B lineage | 5.11e-09 | 24 |
pro-B cell | 5.11e-09 | 24 |
lymphoid lineage restricted progenitor cell | 8.67e-09 | 52 |
mesenchymal cell | 2.04e-07 | 354 |
connective tissue cell | 5.49e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.76e-17 | 98 |
blood island | 8.76e-17 | 98 |
hemolymphoid system | 3.23e-16 | 108 |
immune system | 1.21e-13 | 93 |
bone marrow | 8.65e-13 | 76 |
bone element | 2.21e-11 | 82 |
skeletal element | 4.17e-09 | 90 |
lateral plate mesoderm | 4.63e-07 | 203 |
skeletal system | 6.80e-07 | 100 |
connective tissue | 7.44e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.18e-13 | 39 |
myeloid leukemia | 2.49e-12 | 31 |
hematologic cancer | 1.56e-09 | 51 |
immune system cancer | 1.56e-09 | 51 |