FFCP PHASE1:Hg19::chr15:77197655..77197716,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:77197655..77197716,-
|short_description=p1@SCAPER
|description=CAGE_peak_1_at_SCAPER_5end
|association_with_transcript=27bp_to_uc002bbz.1,uc002bca.1,uc002...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=49855 | |EntrezGene=49855 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13081 | |HGNC=13081 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BY12,Q6NSF1 | |UniProt=Q9BY12,Q6NSF1 | ||
|association_with_transcript=27bp_to_uc002bbz.1,uc002bca.1,uc002bcb.1,uc002bcc.1_5end | |||
|cluster_id=chr15:77197655..77197716,- | |||
|coexpression_cluster_id=C1743 | |||
|description=CAGE_peak_1_at_SCAPER_5end | |||
|id=chr15:77197655..77197716,- | |||
|ontology_enrichment_celltype=CL:0000738!2.65e-09!140;CL:0000542!6.04e-09!53;CL:0000051!6.04e-09!53;CL:0000838!1.04e-08!52;CL:0002087!1.34e-07!119;CL:0000791!2.34e-07!18;CL:0000789!2.34e-07!18;CL:0002420!2.34e-07!18;CL:0002419!2.34e-07!18;CL:0000790!2.34e-07!18;CL:0000037!2.50e-07!172;CL:0000566!2.50e-07!172;CL:0002031!6.20e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.52e-07;18!CL:0000789;2.52e-07;18!CL:0002419;2.52e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.21e-09,136;CL:0000542,6.03e-09,53;CL:0000051,6.03e-09,53;CL:0000838,1.04e-08,52;CL:0002087,6.31e-08,115;CL:0000037,1.44e-07,168;CL:0000791,2.34e-07,18;CL:0000789,2.34e-07,18;CL:0002420,2.34e-07,18;CL:0002419,2.34e-07,18;CL:0000790,2.34e-07,18;CL:0002031,3.17e-07,120 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.58e-10;82!CL:0000790;2.52e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.60e-41!115;UBERON:0001049!1.73e-23!57;UBERON:0005068!1.73e-23!57;UBERON:0006241!1.73e-23!57;UBERON:0007135!1.73e-23!57;UBERON:0001017!4.60e-20!82;UBERON:0003080!1.18e-19!42;UBERON:0002780!1.79e-19!41;UBERON:0001890!1.79e-19!41;UBERON:0006240!1.79e-19!41;UBERON:0000955!2.68e-19!69;UBERON:0006238!2.68e-19!69;UBERON:0000073!4.33e-19!94;UBERON:0001016!4.33e-19!94;UBERON:0002616!4.68e-19!59;UBERON:0005743!6.66e-19!86;UBERON:0002020!8.94e-16!34;UBERON:0003528!8.94e-16!34;UBERON:0001893!1.67e-15!34;UBERON:0002791!4.09e-15!33;UBERON:0002346!4.27e-15!90;UBERON:0001869!1.37e-14!32;UBERON:0003075!8.94e-14!86;UBERON:0007284!8.94e-14!86;UBERON:0002619!6.04e-12!22;UBERON:0000956!3.89e-11!25;UBERON:0000203!3.89e-11!25;UBERON:0001950!8.89e-11!20;UBERON:0000153!1.72e-10!129;UBERON:0007811!1.72e-10!129;UBERON:0003056!1.91e-10!61;UBERON:0000924!4.69e-09!173;UBERON:0006601!4.69e-09!173;UBERON:0000033!6.52e-09!123;UBERON:0004121!3.80e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.02e-14;41!UBERON:0001890;2.02e-14;41!UBERON:0003528;1.43e-13;34!UBERON:0002020;1.43e-13;34!UBERON:0002791;1.80e-13;32!UBERON:0001869;2.48e-13;32!UBERON:0001893;2.80e-13;34!UBERON:0000073;7.73e-13;53!UBERON:0002616;7.73e-13;53!UBERON:0002619;5.55e-12;22!UBERON:0007023;3.14e-11;114!UBERON:0000956;3.71e-11;25!UBERON:0000203;3.71e-11;25!UBERON:0001950;8.30e-11;20!UBERON:0001017;3.55e-09;75!UBERON:0000955;9.09e-09;68!UBERON:0001016;9.75e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.24e-40,114;UBERON:0001049,2.76e-23,56;UBERON:0005068,2.76e-23,56;UBERON:0006241,2.76e-23,56;UBERON:0007135,2.76e-23,56;UBERON:0000073,1.13e-21,53;UBERON:0002616,1.13e-21,53;UBERON:0001016,6.31e-20,89;UBERON:0001017,7.84e-20,81;UBERON:0002780,1.78e-19,41;UBERON:0001890,1.78e-19,41;UBERON:0003080,1.78e-19,41;UBERON:0006240,1.78e-19,41;UBERON:0000955,4.51e-19,68;UBERON:0006238,4.51e-19,68;UBERON:0003528,8.93e-16,34;UBERON:0002020,8.93e-16,34;UBERON:0002346,1.45e-15,86;UBERON:0001893,1.67e-15,34;UBERON:0002791,9.83e-15,32;UBERON:0001869,1.37e-14,32;UBERON:0003075,3.22e-14,82;UBERON:0007284,3.22e-14,82;UBERON:0002619,6.04e-12,22;UBERON:0000956,3.88e-11,25;UBERON:0000203,3.88e-11,25;UBERON:0001950,8.87e-11,20;UBERON:0003056,1.22e-10,61;UBERON:0011216,1.81e-10,223;UBERON:0004121,8.22e-09,171;UBERON:0000924,8.22e-09,171;UBERON:0006601,8.22e-09,171;UBERON:0010371,3.02e-08,104;UBERON:0010314,9.60e-07,132 | |||
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| ||
|short_description=p1@SCAPER | |||
}} | }} |
Latest revision as of 04:47, 19 September 2015
Short description: | p1@SCAPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCAPER_5end |
Coexpression cluster: | C1743_cerebellum_pituitary_pineal_lung_parietal_occipital_CD4 |
Association with transcript: | 27bp_to_uc002bbz.1, uc002bca.1, uc002bcb.1, uc002bcc.1_5end |
EntrezGene: | SCAPER |
HGNC: | 13081 |
UniProt: | Q9BY12Q6NSF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.21e-09 | 136 |
lymphocyte | 6.03e-09 | 53 |
common lymphoid progenitor | 6.03e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.04e-08 | 52 |
nongranular leukocyte | 6.31e-08 | 115 |
hematopoietic stem cell | 1.44e-07 | 168 |
mature alpha-beta T cell | 2.34e-07 | 18 |
alpha-beta T cell | 2.34e-07 | 18 |
immature T cell | 2.34e-07 | 18 |
mature T cell | 2.34e-07 | 18 |
immature alpha-beta T cell | 2.34e-07 | 18 |
hematopoietic lineage restricted progenitor cell | 3.17e-07 | 120 |