FFCP PHASE1:Hg19::chr11:64546263..64546274,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7536 | |EntrezGene=7536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12950 | |HGNC=12950 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000334944_5end | |association_with_transcript=-5bp_to_ENST00000334944_5end | ||
|cluster_id=chr11:64546263..64546274,- | |||
|description=CAGE_peak_4_at_SF1_5end | |description=CAGE_peak_4_at_SF1_5end | ||
|id=chr11:64546263..64546274,- | |id=chr11:64546263..64546274,- | ||
|ontology_enrichment_celltype=CL:0000766!3.19e-11!76;CL:0002057!4.24e-11!42;CL:0000860!3.25e-09!45;CL:0000557!6.05e-08!71;CL:0000839!6.95e-07!70 | |ontology_enrichment_celltype=CL:0000766!3.19e-11!76;CL:0002057!4.24e-11!42;CL:0000860!3.25e-09!45;CL:0000557!6.05e-08!71;CL:0000839!6.95e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.49e-11;33!CL:0002057;3.49e-11;33!CL:0000473;2.50e-08;39!CL:0000234;2.50e-08;39!CL:0000576;2.30e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.24e-13,72;CL:0000860,3.28e-11,42;CL:0002057,3.28e-11,42;CL:0000473,9.11e-10,48;CL:0000234,9.11e-10,48;CL:0000557,1.41e-09,67;CL:0000839,1.99e-08,66;CL:0002009,5.05e-08,61;CL:0002194,1.61e-07,59;CL:0000576,1.61e-07,59;CL:0000040,1.61e-07,59;CL:0000559,1.61e-07,59;CL:0000738,8.65e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.01e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.15e-07!216;UBERON:0002371!4.75e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.81e-08,76;UBERON:0002405,3.56e-08,93;UBERON:0003081,9.76e-08,203;UBERON:0002193,1.04e-07,108;UBERON:0002390,1.26e-07,98;UBERON:0003061,1.26e-07,98;UBERON:0001474,9.15e-07,82 | |||
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| ||
|short_description=p4@SF1 | |short_description=p4@SF1 | ||
}} | }} |
Latest revision as of 04:34, 19 September 2015
Short description: | p4@SF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000334944_5end |
EntrezGene: | SF1 |
HGNC: | 12950 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.24e-13 | 72 |
classical monocyte | 3.28e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.28e-11 | 42 |
defensive cell | 9.11e-10 | 48 |
phagocyte | 9.11e-10 | 48 |
granulocyte monocyte progenitor cell | 1.41e-09 | 67 |
myeloid lineage restricted progenitor cell | 1.99e-08 | 66 |
macrophage dendritic cell progenitor | 5.05e-08 | 61 |
monopoietic cell | 1.61e-07 | 59 |
monocyte | 1.61e-07 | 59 |
monoblast | 1.61e-07 | 59 |
promonocyte | 1.61e-07 | 59 |
leukocyte | 8.65e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.81e-08 | 76 |
immune system | 3.56e-08 | 93 |
lateral plate mesoderm | 9.76e-08 | 203 |
hemolymphoid system | 1.04e-07 | 108 |
hematopoietic system | 1.26e-07 | 98 |
blood island | 1.26e-07 | 98 |
bone element | 9.15e-07 | 82 |