FFCP PHASE1:Hg19::chr19:49362621..49362640,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57664 | |EntrezGene=57664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14339 | |HGNC=14339 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_uc002pkw.1_5end | |association_with_transcript=-8bp_to_uc002pkw.1_5end | ||
|cluster_id=chr19:49362621..49362640,- | |||
|coexpression_cluster_id=C128 | |coexpression_cluster_id=C128 | ||
|description=CAGE_peak_6_at_PLEKHA4_5end | |description=CAGE_peak_6_at_PLEKHA4_5end | ||
|id=chr19:49362621..49362640,- | |id=chr19:49362621..49362640,- | ||
|ontology_enrichment_celltype=CL:0000039!1.17e-13!7;CL:0000586!1.17e-13!7;CL:0000037!8.00e-12!172;CL:0000566!8.00e-12!172;CL:0002031!3.99e-11!124;CL:0000738!5.70e-11!140;CL:0002032!1.58e-10!165;CL:0000837!1.58e-10!165;CL:0000988!1.70e-10!182;CL:0000838!1.86e-10!52;CL:0000542!3.75e-10!53;CL:0000051!3.75e-10!53;CL:0002322!3.79e-10!5;CL:0002087!2.20e-09!119;CL:0000945!4.33e-07!24;CL:0000826!4.33e-07!24 | |ontology_enrichment_celltype=CL:0000039!1.17e-13!7;CL:0000586!1.17e-13!7;CL:0000037!8.00e-12!172;CL:0000566!8.00e-12!172;CL:0002031!3.99e-11!124;CL:0000738!5.70e-11!140;CL:0002032!1.58e-10!165;CL:0000837!1.58e-10!165;CL:0000988!1.70e-10!182;CL:0000838!1.86e-10!52;CL:0000542!3.75e-10!53;CL:0000051!3.75e-10!53;CL:0002322!3.79e-10!5;CL:0002087!2.20e-09!119;CL:0000945!4.33e-07!24;CL:0000826!4.33e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.79e-75;7!CL:0000586;1.79e-75;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.79e-75,7;CL:0000586,1.79e-75,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.03e-53;10!UBERON:0005564;4.03e-53;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;1.34e-24;22!DOID:2994;1.34e-24;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.34e-24,22;DOID:2994,1.34e-24,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.66e-66;8!UBERON:0003135;2.24e-48;11!UBERON:0000991;9.82e-26;21!UBERON:0003101;1.34e-24;22!UBERON:0000079;1.34e-24;22!UBERON:0002323;1.39e-11;45!UBERON:0003133;1.52e-09;44!UBERON:0000922;3.14e-09;49!UBERON:0002553;1.26e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.66e-66,8;UBERON:0003135,2.24e-48,11;UBERON:0000991,9.82e-26,21;UBERON:0009196,9.82e-26,21;UBERON:0009117,9.82e-26,21;UBERON:0005564,9.82e-26,21;UBERON:0004176,1.34e-24,22;UBERON:0003101,1.34e-24,22;UBERON:0000079,1.34e-24,22;UBERON:0002323,4.14e-12,46;UBERON:0003133,1.25e-11,48;UBERON:0004458,2.10e-11,49;UBERON:0003886,2.12e-10,54;UBERON:0005156,1.45e-09,59;UBERON:0000990,1.45e-09,59;UBERON:0002553,2.88e-09,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0.587200878669695,0,0.200544447470142,0,0.447830948479849,0,0.257575567634187,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.75374599577023,0,0,0.605399502633369,0,0.632924774881769,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,1.20118796110804,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0.501559486172034,0.977766799900771,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0.444859689486181,0,0,0.339928028092699,0,0.68725489096526,0,0,0,0,0.752875595388864,0.127986611154418,0,0.473554504088034,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.530119073285941,0.232387885739037,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.434589487688032,0.31900115973192,0,0.533034776018635,0,0,0,1.1279783030859,0.980312671588698,0.671286347903371,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0.739202355635845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0.327796715891087,0,2.65170957329153,6.41321772637345,3.12442658418473,4.76344324655513,0.151557396436479,0,0,0,0,0,0.387533459016037,0.744896571550295,0,0.12729431655633,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0.393364276848904,0,0,0,0,0,0,0,0.587200878669695,0,0.200544447470142,0,0.447830948479849,0,0.257575567634187,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.75374599577023,0,0,0.605399502633369,0,0.632924774881769,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0.426730222566507,1.20118796110804,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0.501559486172034,0.977766799900771,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0.444859689486181,0,0,0.339928028092699,0,0.68725489096526,0,0,0,0,0.752875595388864,0.127986611154418,0,0.473554504088034,0.821127996921047,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853815942907168,0.530119073285941,0.232387885739037,0.518305275076852,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560425719967636,0,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0.432807638929335,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.0897576444097721,0.434589487688032,0.31900115973192,0,0.533034776018635,0,0,0,1.1279783030859,0.980312671588698,0.671286347903371,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0.525774708558629,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,0,0.0524545881349981,0.739202355635845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0.197611631897944,0.121792598380896,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0,0,0.196308467114945,0,0,0,0,0.257831551894309,0.0999411559249289,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0.327796715891087,0,2.65170957329153,6.41321772637345,3.12442658418473,4.76344324655513,0.151557396436479,0,0,0,0,0,0.387533459016037,0.744896571550295,0,0.12729431655633,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0.269475606319761,0,0,0,0,0,0 | ||
|short_description=p6@PLEKHA4 | |short_description=p6@PLEKHA4 | ||
}} | }} |
Latest revision as of 04:18, 19 September 2015
Short description: | p6@PLEKHA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLEKHA4_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -8bp_to_uc002pkw.1_5end |
EntrezGene: | PLEKHA4 |
HGNC: | 14339 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.79e-75 | 7 |
germ cell | 1.79e-75 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.66e-66 | 8 |
male reproductive organ | 2.24e-48 | 11 |
gonad | 9.82e-26 | 21 |
indifferent external genitalia | 9.82e-26 | 21 |
indifferent gonad | 9.82e-26 | 21 |
gonad primordium | 9.82e-26 | 21 |
external genitalia | 1.34e-24 | 22 |
male organism | 1.34e-24 | 22 |
male reproductive system | 1.34e-24 | 22 |
body cavity | 4.14e-12 | 46 |
reproductive organ | 1.25e-11 | 48 |
body cavity or lining | 2.10e-11 | 49 |
body cavity precursor | 2.12e-10 | 54 |
reproductive structure | 1.45e-09 | 59 |
reproductive system | 1.45e-09 | 59 |
anatomical cavity | 2.88e-09 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.34e-24 | 22 |
germ cell cancer | 1.34e-24 | 22 |