FFCP PHASE1:Hg19::chr1:183774356..183774374,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:183774356..183774374,+
|short_description=p3@RGL1
|description=CAGE_peak_3_at_RGL1_5end
|association_with_transcript=66bp_to_ENST00000539189_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23179 | |EntrezGene=23179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30281 | |HGNC=30281 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6U6 | |UniProt=F5H6U6 | ||
|association_with_transcript=66bp_to_ENST00000539189_5end | |||
|cluster_id=chr1:183774356..183774374,+ | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_3_at_RGL1_5end | |||
|id=chr1:183774356..183774374,+ | |||
|ontology_enrichment_celltype=CL:0000557!9.37e-09!71;CL:0000839!2.29e-08!70;CL:0002194!3.95e-08!63;CL:0000576!3.95e-08!63;CL:0000040!3.95e-08!63;CL:0000559!3.95e-08!63;CL:0002009!4.60e-08!65 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.23e-08;39!CL:0000234;2.23e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,3.42e-09,67;CL:0000839,3.63e-09,66;CL:0002194,1.19e-08,59;CL:0000576,1.19e-08,59;CL:0000040,1.19e-08,59;CL:0000559,1.19e-08,59;CL:0002009,2.75e-08,61;CL:0000473,3.07e-08,48;CL:0000234,3.07e-08,48;CL:0000766,4.24e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.33e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;9.25e-14;34!UBERON:0002020;9.25e-14;34!UBERON:0001893;1.05e-13;34!UBERON:0002791;3.48e-13;32!UBERON:0001869;4.11e-13;32!UBERON:0002780;4.23e-13;41!UBERON:0001890;4.23e-13;41!UBERON:0000073;3.37e-12;53!UBERON:0002616;3.37e-12;53!UBERON:0002619;1.03e-11;22!UBERON:0001950;2.08e-10;20!UBERON:0000956;3.89e-10;25!UBERON:0000203;3.89e-10;25!UBERON:0007023;5.16e-09;114!UBERON:0001017;2.73e-08;75!UBERON:0000125;7.60e-08;9!UBERON:0002308;7.60e-08;9!UBERON:0002420;9.04e-08;9!UBERON:0007245;9.04e-08;9!UBERON:0010009;9.04e-08;9!UBERON:0010011;9.04e-08;9!UBERON:0000454;9.04e-08;9!UBERON:0001016;3.13e-07;83!UBERON:0000955;4.11e-07;68 | |||
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|phase1_expression=2.36181893051724,3.8538094300377,4.65149533516705,2.00146596706261,1.78784437770915,0.872338524100369,0,1.26343974685366,0.522371256399677,0.245733936501509,0,0,0,3.09415882400117,1.98838425436749,2.6893005858071,0.602694528023977,0,1.46379839637152,0.861847406537515,0.408001382488506,0,2.28988789704845,0.684372125364421,0.376627918784408,0.534893840235659,1.23150884174919,0.393553906568396,0,0.767658796194425,0,0,0,0,0,0,0,1.66198622559563,0.401088894940283,0.434021741431704,56.8745304569408,47.936262570809,67.2272231525227,3.78035420826868,1.13362783106643,2.18325655069035,6.27558399645349,7.81218987241469,5.26500830521676,8.34307937734236,6.40401766322752,11.5876292645407,0.689491361473237,1.29096936716765,0,3.20011977222428,2.45615535052061,6.06753408001728,0.612167784741805,1.28371610830437,3.83602275479425,15.8328624089624,7.57961898962201,12.7867425159808,2.32167390902867,2.26954089876456,1.86846674698672,4.77372463987812,5.73631210262222,5.86409880703815,3.02699751316684,2.94622108790052,3.79754864929061,1.47878700418359,2.33864729961548,1.25795187305026,0.561643155732475,0.450530678524519,0.32145117339416,0.855038231223746,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0,0,1.00269411196656,0,0,0,0.128091319725675,0,0.822189523018381,0.552700035571697,0.289803085735052,0,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,2.68280343881454,2.04580098949649,1.80719576192283,1.50401373190767,2.31754430337318,2.3858578411533,0.486634870302636,0.567208902984407,1.55210578223795,0.614843499851882,11.5916481815476,0,0,7.14004266040303,7.83583817846703,6.78085598646212,0.238490624305342,0,0.74291500265913,2.78267370313387,0,4.51282652089873,1.13061588384802,0,0.275118041940067,0.835979866147242,0.775250277507987,1.42306505074684,1.67360306382335,0.402829317109147,0.760272105718513,1.46437234528902,4.04429388380456,0,0.982297011124877,1.57170560838319,1.0135033243499,0,2.84779697870439,2.01521918323448,0,0,0,1.49091585508596,2.02608818663328,4.63432132846266,5.16305917347865,2.12801029319014,3.36406560085384,0,3.7000132262574,4.66816553099649,2.2900814251847,2.28846664358842,5.2975099675726,0.576175924479999,0,1.24864030732128,0.570471821544449,3.88566569434683,0.587172493218824,1.29498355494505,1.12360645361799,1.22492502752936,1.35117749042945,1.65321249881225,1.18800285728205,1.23633464639278,0,0.718618141816238,1.0100166837244,0.875829639103749,1.6623846929051,1.31693286264251,2.75839016219118,0.45071417671979,1.58805056424029,1.07633781413317,2.34913127700424,1.48352330811693,0.900273288253207,2.06105058476878,0.515281080091258,0.930584281657949,0.506328996723799,0.487185025805993,2.01947019395292,1.93304787148829,3.07127507955743,1.77504796258307,1.5112814734146,0.508681776931463,0,0,0,0.121973706129595,0.265059536642971,0.69716365721711,0.621966330092223,0,0,3.12899064659632,1.28648187638577,1.38134921352481,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0.982827216677626,5.90789906681404,0,1.72183813960359,0.686271241194102,0,0,0,0,0,0,0,3.13012093432707,1.99594780200897,0.577465791044295,0,0.380508304469197,0,0,52.4442222966156,5.6161023633417,16.2007966894714,0,0,0,0,0,0,23.6478354190053,3.78608266256872,2.69526550203004,2.59415916150531,1.38866676769018,0.126995788584338,0,0,0,0,0,1.14330573052231,0.784917590417525,1.74384027533312,0.5867062865676,2.06834745212444,0,1.690605505112,1.06375246633948,1.04007436911366,0.257207374262142,0,0,2.00169191121407,1.08524321078289,0,1.30294473717494,0.710783897485092,0.791951872933429,2.41151501647669,6.97226766880235,1.69954085009497,30.4059451602976,38.1715389488416,31.6250909224547,0.479249710983165,1.14861935834114,1.42636905040718,3.18518874668674,1.2328579353023,1.43248770591916,0,0,0.215627574859517,0,6.35236560556159,6.50699269288109,4.63973287666617,2.34522771468088,2.55175500661265,0,0,0,2.69921281782108,4.00136416847742,3.25518028439683,0.415941723061614,2.3195768543631,1.10391690523754,1.52283839490527,3.61135319673263,0,1.03473071292505,0,0,3.12781012085098,1.17480694477644,0.343143423810856,0,0.431428401637234,0.106727557803444,0,1.66435439510497,1.5119514666484,2.72918588600655,3.52962538562544,3.08726103876381,4.22859192543813,6.14048698880044,2.57366273829772,0,1.69630663182921,1.9531789784444,3.85997633264903,3.11552657510173,2.32420756919918,1.32945394550784,0,0,3.09999010044438,0.910455840033585,1.31124414959424,0,0.308061348417659,0,0,0.527758144464379,0,0.680374821106063,1.29549549661284,0,0.270946437543853,0.501689773854853,0,0,0,0,0,1.53870075069834,0,0.976135183992909,3.50339439602256,0.915694648183434,1.07262349896764,0.574265537996172,0,0,1.83674364755032,1.54048617114644,1.22802939780904,1.37836572484531,10.3123435073543,2.61030049045611,1.53407929348982,1.78064071293475,0,0,0,0,3.253918845081,3.77774816196768,2.7881490806424,2.15623506123262,3.19383618190213,1.73986598415015,0.55597265731176,1.43124886741991,2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| ||
|short_description=p3@RGL1 | |||
}} | }} |
Latest revision as of 04:02, 19 September 2015
Short description: | p3@RGL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RGL1_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 66bp_to_ENST00000539189_5end |
EntrezGene: | RGL1 |
HGNC: | 30281 |
UniProt: | F5H6U6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 3.42e-09 | 67 |
myeloid lineage restricted progenitor cell | 3.63e-09 | 66 |
monopoietic cell | 1.19e-08 | 59 |
monocyte | 1.19e-08 | 59 |
monoblast | 1.19e-08 | 59 |
promonocyte | 1.19e-08 | 59 |
macrophage dendritic cell progenitor | 2.75e-08 | 61 |
defensive cell | 3.07e-08 | 48 |
phagocyte | 3.07e-08 | 48 |
myeloid leukocyte | 4.24e-07 | 72 |