FFCP PHASE1:Hg19::chr3:57113281..57113312,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50650 | |EntrezGene=50650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=683 | |HGNC=683 | ||
|TSSclassifier=strong | |||
|UniProt=C9J5K8 | |UniProt=C9J5K8 | ||
|association_with_transcript=0bp_to_ENST00000468466_5end | |association_with_transcript=0bp_to_ENST00000468466_5end | ||
|cluster_id=chr3:57113281..57113312,- | |||
|description=CAGE_peak_4_at_ARHGEF3_5end | |description=CAGE_peak_4_at_ARHGEF3_5end | ||
|id=chr3:57113281..57113312,- | |id=chr3:57113281..57113312,- | ||
|ontology_enrichment_celltype=CL:0000066!1.36e-08!254 | |ontology_enrichment_celltype=CL:0000066!1.36e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.03e-09,58;CL:0000066,2.57e-07,253;CL:0002076,9.23e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.81e-15!106;DOID:0050687!2.21e-13!143;DOID:299!4.92e-07!25 | |ontology_enrichment_disease=DOID:305!4.81e-15!106;DOID:0050687!2.21e-13!143;DOID:299!4.92e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:299;1.68e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.09e-14,106;DOID:0050687,3.90e-11,143;DOID:299,1.96e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0000062!3.52e-19!511;UBERON:0000468!4.08e-16!659;UBERON:0000922!1.25e-15!612;UBERON:0000480!5.83e-15!626;UBERON:0000467!1.19e-14!625;UBERON:0002050!6.36e-14!605;UBERON:0005423!6.36e-14!605;UBERON:0000923!1.44e-13!604;UBERON:0005291!1.44e-13!604;UBERON:0006598!1.44e-13!604;UBERON:0002532!1.44e-13!604;UBERON:0001007!3.25e-10!155;UBERON:0001555!3.25e-10!155;UBERON:0007026!3.25e-10!155;UBERON:0005743!3.32e-10!86;UBERON:0004119!9.95e-10!169;UBERON:0000925!9.95e-10!169;UBERON:0006595!9.95e-10!169;UBERON:0007023!1.38e-09!115;UBERON:0000481!1.65e-09!347;UBERON:0000153!1.87e-09!129;UBERON:0007811!1.87e-09!129;UBERON:0000033!3.72e-09!123;UBERON:0001017!3.95e-09!82;UBERON:0004921!6.96e-09!129;UBERON:0004185!6.96e-09!129;UBERON:0004121!8.21e-09!169;UBERON:0000073!8.67e-09!94;UBERON:0001016!8.67e-09!94;UBERON:0000475!2.98e-08!365;UBERON:0000924!4.15e-08!173;UBERON:0006601!4.15e-08!173;UBERON:0000077!8.86e-08!130;UBERON:0005409!2.08e-07!35;UBERON:0003075!2.86e-07!86;UBERON:0007284!2.86e-07!86 | |ontology_enrichment_uberon=UBERON:0000062!3.52e-19!511;UBERON:0000468!4.08e-16!659;UBERON:0000922!1.25e-15!612;UBERON:0000480!5.83e-15!626;UBERON:0000467!1.19e-14!625;UBERON:0002050!6.36e-14!605;UBERON:0005423!6.36e-14!605;UBERON:0000923!1.44e-13!604;UBERON:0005291!1.44e-13!604;UBERON:0006598!1.44e-13!604;UBERON:0002532!1.44e-13!604;UBERON:0001007!3.25e-10!155;UBERON:0001555!3.25e-10!155;UBERON:0007026!3.25e-10!155;UBERON:0005743!3.32e-10!86;UBERON:0004119!9.95e-10!169;UBERON:0000925!9.95e-10!169;UBERON:0006595!9.95e-10!169;UBERON:0007023!1.38e-09!115;UBERON:0000481!1.65e-09!347;UBERON:0000153!1.87e-09!129;UBERON:0007811!1.87e-09!129;UBERON:0000033!3.72e-09!123;UBERON:0001017!3.95e-09!82;UBERON:0004921!6.96e-09!129;UBERON:0004185!6.96e-09!129;UBERON:0004121!8.21e-09!169;UBERON:0000073!8.67e-09!94;UBERON:0001016!8.67e-09!94;UBERON:0000475!2.98e-08!365;UBERON:0000924!4.15e-08!173;UBERON:0006601!4.15e-08!173;UBERON:0000077!8.86e-08!130;UBERON:0005409!2.08e-07!35;UBERON:0003075!2.86e-07!86;UBERON:0007284!2.86e-07!86 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,4.13e-11,223;UBERON:0007023,1.40e-09,114;UBERON:0000922,2.64e-09,592;UBERON:0005423,6.54e-08,581;UBERON:0001007,2.30e-07,145;UBERON:0001555,2.30e-07,145;UBERON:0007026,2.30e-07,145;UBERON:0004921,8.21e-07,118 | |||
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| ||
|short_description=p4@ARHGEF3 | |short_description=p4@ARHGEF3 | ||
}} | }} |
Latest revision as of 04:02, 19 September 2015
Short description: | p4@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ARHGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000468466_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | C9J5K8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.03e-09 | 58 |
epithelial cell | 2.57e-07 | 253 |
endo-epithelial cell | 9.23e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 4.13e-11 | 223 |
adult organism | 1.40e-09 | 114 |
embryo | 2.64e-09 | 592 |
developing anatomical structure | 6.54e-08 | 581 |
digestive system | 2.30e-07 | 145 |
digestive tract | 2.30e-07 | 145 |
primitive gut | 2.30e-07 | 145 |
subdivision of digestive tract | 8.21e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.09e-14 | 106 |
cell type cancer | 3.90e-11 | 143 |
adenocarcinoma | 1.96e-07 | 25 |