FFCP PHASE1:Hg19::chr3:57112828..57112845,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50650 | |EntrezGene=50650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=683 | |HGNC=683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000477440_5end | |association_with_transcript=0bp_to_ENST00000477440_5end | ||
|cluster_id=chr3:57112828..57112845,- | |||
|description=CAGE_peak_10_at_ARHGEF3_5end | |description=CAGE_peak_10_at_ARHGEF3_5end | ||
|id=chr3:57112828..57112845,- | |id=chr3:57112828..57112845,- | ||
|ontology_enrichment_celltype=CL:0000066!1.15e-09!254;CL:0000223!1.57e-08!59 | |ontology_enrichment_celltype=CL:0000066!1.15e-09!254;CL:0000223!1.57e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0000771;1.20e-15;2!CL:0000097;3.14e-14;5!CL:0000163;1.84e-13;9!CL:0000083;4.87e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000771,1.45e-15,2;CL:0000097,3.16e-14,5;CL:0002028,3.16e-14,5;CL:0000163,1.36e-13,9;CL:0000083,8.87e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.90e-08;1!UBERON:0009117;6.27e-07;10!UBERON:0005564;6.27e-07;10 | |||
|ontology_enrichment_disease=DOID:305!3.29e-26!106;DOID:0050687!8.50e-20!143;DOID:14566!1.79e-11!239;DOID:162!1.22e-10!235;DOID:299!1.45e-07!25 | |ontology_enrichment_disease=DOID:305!3.29e-26!106;DOID:0050687!8.50e-20!143;DOID:14566!1.79e-11!239;DOID:162!1.22e-10!235;DOID:299!1.45e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:4929;1.44e-15;2!DOID:170;3.11e-11;6!DOID:3111;1.90e-08;1!DOID:3603;1.90e-08;1!DOID:1793;4.87e-08;4!DOID:299;4.50e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.78e-15,2;DOID:170,4.06e-11,6;DOID:305,6.01e-09,106;DOID:3111,2.64e-08,1;DOID:3603,2.64e-08,1;DOID:1793,8.87e-08,4;DOID:299,5.69e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.21e-10!169;UBERON:0000925!4.21e-10!169;UBERON:0006595!4.21e-10!169;UBERON:0001007!1.32e-09!155;UBERON:0001555!1.32e-09!155;UBERON:0007026!1.32e-09!155;UBERON:0005156!2.18e-08!59;UBERON:0000990!2.18e-08!59;UBERON:0000466!7.59e-08!126;UBERON:0000077!9.28e-08!130;UBERON:0004921!1.23e-07!129;UBERON:0004185!1.23e-07!129;UBERON:0000922!2.53e-07!612;UBERON:0000062!2.86e-07!511;UBERON:0000464!3.74e-07!104;UBERON:0003133!3.96e-07!48;UBERON:0000344!5.64e-07!12;UBERON:0003101!5.94e-07!22;UBERON:0000079!5.94e-07!22;UBERON:0002553!6.94e-07!70 | |ontology_enrichment_uberon=UBERON:0004119!4.21e-10!169;UBERON:0000925!4.21e-10!169;UBERON:0006595!4.21e-10!169;UBERON:0001007!1.32e-09!155;UBERON:0001555!1.32e-09!155;UBERON:0007026!1.32e-09!155;UBERON:0005156!2.18e-08!59;UBERON:0000990!2.18e-08!59;UBERON:0000466!7.59e-08!126;UBERON:0000077!9.28e-08!130;UBERON:0004921!1.23e-07!129;UBERON:0004185!1.23e-07!129;UBERON:0000922!2.53e-07!612;UBERON:0000062!2.86e-07!511;UBERON:0000464!3.74e-07!104;UBERON:0003133!3.96e-07!48;UBERON:0000344!5.64e-07!12;UBERON:0003101!5.94e-07!22;UBERON:0000079!5.94e-07!22;UBERON:0002553!6.94e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.44e-15;2!UBERON:0003135;1.55e-10;11!UBERON:0006947;1.96e-10;3!UBERON:0004054;1.96e-10;3!UBERON:0004913;7.83e-09;1!UBERON:0003703;7.83e-09;1!UBERON:0001174;7.83e-09;1!UBERON:0004914;7.83e-09;1!UBERON:0001000;1.90e-08;1!UBERON:0001736;1.90e-08;1!UBERON:0000996;1.90e-08;1!UBERON:0001301;1.90e-08;1!UBERON:0005352;1.90e-08;1!UBERON:0005904;4.87e-08;4!UBERON:0000058;4.89e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.60e-15,2;UBERON:0003135,1.44e-10,11;UBERON:0006947,2.27e-10,3;UBERON:0004054,2.27e-10,3;UBERON:0004913,7.56e-09,1;UBERON:0003703,7.56e-09,1;UBERON:0001174,7.56e-09,1;UBERON:0004914,7.56e-09,1;UBERON:0001301,1.27e-08,1;UBERON:0001736,1.48e-08,1;UBERON:0006298,1.48e-08,1;UBERON:0000996,1.84e-08,1;UBERON:0001000,3.53e-08,1;UBERON:0005352,3.53e-08,1;UBERON:0005904,5.43e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0.85870796139317,1.77936752594749,0.251085279189606,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0.485168122375632,0.232429036905685,0,0,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.175669571386252,0.72038491523742,0,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0.286836620748814,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0.57978255948989,0.272746120590835,0.286804595389004,0.609868530647977,0.397589304964456,0,0.414644220061482,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0.860919069801795,0,0,0,0,0.277765335475589,0,0,0,0.34779121492523,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0.891786973732369,0,0.16798212819886,0,0,0,0.383382679165211,0.492663237895943,0.264145302039678,3.93923419527467,4.90007841617669,3.7872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.483437798366489,0,0.644566922551274,0.114814448164607,0,0,0,0.385076685522074,0,0,0.527758144464379,0,0,0,0,0,0.501689773854853,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0.082509499920588,0,0,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0.178064071293475,0.330569830721956,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0.159426272728822,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,1.43176155503017,0,0,0.988551862620595,0,0,0.295930216910801,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.682760689712998,0.762760950878299,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,1.25481369850743,0.307801034015188,0.341826167541004,0,0.718061155278177,0.434589487688032,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,1.30586246527318,0.141353071433941,0,0,0.0884575645033392,0,0.593042257361244,0.370691816839509,0.522109747527277,0.134802265961354,0,0,0.182454789215666,0.19566461893209,1.21390189767046,1.18375320854817,0,0,0,0.300646838828985,0,0,0,0,0,0.853828638089378,0,0.173559738335131,0.489961987071888,0.0870592065804026,1.39781334593624,0.343972064943233,0.677294319023596,0.65780385377567,0.328461828212837,0.387956065953678,0,0,0,0.397429223405979,0,0.391102765469606,0.64127056201227,0.640358984218058,0,2.4495370916198,0,0,0.432164393964449,0.621262677827163,0.471388069233591,0,0.104602846312333,0.101998217636322,0.866851769704557,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.604651252380536,0,0,1.26053091691558,1.31865373409866,1.41547442093788,0.196854963029498,0,0,0.136203406111576,0.321506296930038,0.275078873194468,0.415440338029185,0,0,0,0,0.630445658393585,0.681909645754975,0.105600336519406,0,0.959575986597226,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0,0.855434189421647,0.704815022316672,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0.573409195690071,0.332787154610557,0.124192805882767,0,0.124980407962107,0,0.285465333544967,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0.228840068396924,0,0.15543720058278,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54095864325843,0.214441591374926,0,0,0,0,0.179088841081487,0,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0,0.163565394255844,0.327609848846413,0.245772908753719,1.26787274015176,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37406805901436,0.353909170043221,0.550285795565037,0.346576998451015,0,0,0,0.300841313397029,0.20170506870352,0,0.261906694481422,0,2.66140955190681,0,0,0.206686796501184,0,0,0,0,0,0.894336993477167,0,0,0,0.227662191351298,0.0887023701626388,0,0.514464028312255,0.0679697329768317,0,0.590969204419841,0.556157009460346,0.39246546425257,0.157115589916002,0.840816489941367,0,0,1.43325506366115,0.571812353413251,0,0.116241425368125,0,0,0,0,0,0.860454717640555,0.473328002922261,0.681707238073262,0.423387050190929,0,0.62041277132864,0,0.335566295393377,0.98150233615243,0.121917924982269,0,0.205325613712494,0,0.485710993059139,0,0.198950775161368,0,0.11294608203896,0,0.150962843566674,0.154348316215889,0,0.470317296361523,0,0,0.196308467114945,0,0,0,0.0939839179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| ||
|short_description=p10@ARHGEF3 | |short_description=p10@ARHGEF3 | ||
}} | }} |
Latest revision as of 04:01, 19 September 2015
Short description: | p10@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ARHGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000477440_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eosinophil | 1.45e-15 | 2 |
mast cell | 3.16e-14 | 5 |
basophil mast progenitor cell | 3.16e-14 | 5 |
endocrine cell | 1.36e-13 | 9 |
epithelial cell of pancreas | 8.87e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.60e-15 | 2 |
male reproductive organ | 1.44e-10 | 11 |
male genital duct | 2.27e-10 | 3 |
internal male genitalia | 2.27e-10 | 3 |
hepatopancreatic ampulla | 7.56e-09 | 1 |
extrahepatic bile duct | 7.56e-09 | 1 |
common bile duct | 7.56e-09 | 1 |
duodenal papilla | 7.56e-09 | 1 |
epididymis | 1.27e-08 | 1 |
submandibular gland | 1.48e-08 | 1 |
submandibular gland primordium | 1.48e-08 | 1 |
vagina | 1.84e-08 | 1 |
vas deferens | 3.53e-08 | 1 |
spermatic cord | 3.53e-08 | 1 |
duct of male reproductive system | 5.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.78e-15 | 2 |
endocrine gland cancer | 4.06e-11 | 6 |
carcinoma | 6.01e-09 | 106 |
cystadenocarcinoma | 2.64e-08 | 1 |
mucinous cystadenocarcinoma | 2.64e-08 | 1 |
pancreatic cancer | 8.87e-08 | 4 |
adenocarcinoma | 5.69e-07 | 25 |