FFCP PHASE1:Hg19::chr3:56950376..56950387,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=683 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=111bp_to_uc011bew.1_5end | |||
|cluster_id=chr3:56950376..56950387,- | |||
|description=CAGE_peak_15_at_ARHGEF3_5end | |||
|id=chr3:56950376..56950387,- | |||
|ontology_enrichment_celltype=CL:0000791!1.97e-15!18;CL:0000789!1.97e-15!18;CL:0002420!1.97e-15!18;CL:0002419!1.97e-15!18;CL:0000790!1.97e-15!18;CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000838!1.07e-12!52;CL:0000084!3.66e-10!25;CL:0000827!3.66e-10!25;CL:0000624!4.19e-08!6;CL:0000625!1.28e-07!11;CL:0000037!5.63e-07!172;CL:0000566!5.63e-07!172;CL:0002087!5.65e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.45e-11;1!CL:0000911;3.45e-11;1!CL:0000814;3.45e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.28e-11,1;CL:0000914,3.28e-11,1;CL:0000911,3.28e-11,1;CL:0000814,3.28e-11,1;CL:0002042,3.28e-11,1;CL:0002039,3.28e-11,1;CL:0002040,3.28e-11,1;CL:0002041,3.28e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;1.30e-11;1!DOID:2355;3.45e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.18e-11,1;DOID:2355,4.91e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.44e-11!115;UBERON:0001042!2.91e-08!10;UBERON:0009145!2.91e-08!10;UBERON:0002370!1.10e-07!4;UBERON:0005058!1.10e-07!4;UBERON:0009113!1.10e-07!4;UBERON:0003295!1.10e-07!4;UBERON:0005562!1.10e-07!4;UBERON:0006562!2.09e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.30e-11;1!UBERON:0003831;1.30e-11;1!UBERON:0003898;1.30e-11;1!UBERON:0004830;1.30e-11;1!UBERON:0003830;1.30e-11;1!UBERON:0005175;1.30e-11;1!UBERON:0001774;1.30e-11;1!UBERON:0001103;1.30e-11;1!UBERON:0006834;3.45e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.31e-11,1;UBERON:0003831,1.31e-11,1;UBERON:0003898,1.31e-11,1;UBERON:0004830,1.31e-11,1;UBERON:0003830,1.31e-11,1;UBERON:0005175,1.31e-11,1;UBERON:0001774,1.31e-11,1;UBERON:0001103,1.31e-11,1;UBERON:0010084,1.31e-11,1;UBERON:0006834,3.63e-11,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0.314843125254717,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.822405995998037,5.51715434789238,0,0,1.94826728407911,1.11410456885174,0.589211814949674,0.886135578334485,0.270803863765016,2.68991771423918,1.8208308658383,1.31550323682941,0.829050053357545,1.44901542867526,0.741432815810302,0.535081656179426,0,2.94604291013672,0.766440987203842,1.03088233644789,2.27717722817553,0.318565414324097,0.651083453856419,0,0.752875595388864,0.127986611154418,0,0.947109008176067,0,0.604820229674197,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2329365839288,0.197030760201927,0.215627574859517,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,1.1974762285969,0.5745161103971,0.846694330895531,0.324621940274555,0,0,0,0,0,0.1605880751037,0,0.425846237690326,0,0,0,0,0.19538809540204,0,0,0,2.66457574398256,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0.941881538370149,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,2.40773294189637,0,0.547364367646998,0,0,0,0,0,0.252746318513952,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.687481272035051,0.717873024576814,0,0,0,0.268733889946905,0,0,0,0,0,0,1.1007533168552,0,0,0,0,0,0,0,0,0,0.236417121897595,0.314727528809989,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.533937062838473,1.72924735609633,0.828478110694391,0,0.395223263795889,0,0,0,1.0027595760908,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,2.20858708199438,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,2.2644426535001,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.476128862927481,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0.217716747896961,0.342233301085281,0.606168477131288,0,0,0,0,0,0,0,1.22241444182866,0.406896178315738,0,0,0 | |||
|short_description=p15@ARHGEF3 | |||
}} |
Latest revision as of 03:53, 19 September 2015
Short description: | p15@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ARHGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 111bp_to_uc011bew.1_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.28e-11 | 1 |
immature NK T cell | 3.28e-11 | 1 |
effector T cell | 3.28e-11 | 1 |
mature NK T cell | 3.28e-11 | 1 |
immature NK T cell stage IV | 3.28e-11 | 1 |
immature NK T cell stage I | 3.28e-11 | 1 |
immature NK T cell stage II | 3.28e-11 | 1 |
immature NK T cell stage III | 3.28e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.31e-11 | 1 |
respiratory system muscle | 1.31e-11 | 1 |
skeletal muscle of trunk | 1.31e-11 | 1 |
respiratory system skeletal muscle | 1.31e-11 | 1 |
thoracic segment muscle | 1.31e-11 | 1 |
chest organ | 1.31e-11 | 1 |
muscle of trunk | 1.31e-11 | 1 |
diaphragm | 1.31e-11 | 1 |
future diaphragm | 1.31e-11 | 1 |
uterus or analog | 3.63e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.18e-11 | 1 |
anemia | 4.91e-11 | 1 |