FFCP PHASE1:Hg19::chr3:56950376..56950387,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50650 | |EntrezGene=50650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=683 | |HGNC=683 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=111bp_to_uc011bew.1_5end | |association_with_transcript=111bp_to_uc011bew.1_5end | ||
|cluster_id=chr3:56950376..56950387,- | |||
|description=CAGE_peak_15_at_ARHGEF3_5end | |description=CAGE_peak_15_at_ARHGEF3_5end | ||
|id=chr3:56950376..56950387,- | |id=chr3:56950376..56950387,- | ||
|ontology_enrichment_celltype=CL:0000791!1.97e-15!18;CL:0000789!1.97e-15!18;CL:0002420!1.97e-15!18;CL:0002419!1.97e-15!18;CL:0000790!1.97e-15!18;CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000838!1.07e-12!52;CL:0000084!3.66e-10!25;CL:0000827!3.66e-10!25;CL:0000624!4.19e-08!6;CL:0000625!1.28e-07!11;CL:0000037!5.63e-07!172;CL:0000566!5.63e-07!172;CL:0002087!5.65e-07!119 | |ontology_enrichment_celltype=CL:0000791!1.97e-15!18;CL:0000789!1.97e-15!18;CL:0002420!1.97e-15!18;CL:0002419!1.97e-15!18;CL:0000790!1.97e-15!18;CL:0000542!1.14e-13!53;CL:0000051!1.14e-13!53;CL:0000838!1.07e-12!52;CL:0000084!3.66e-10!25;CL:0000827!3.66e-10!25;CL:0000624!4.19e-08!6;CL:0000625!1.28e-07!11;CL:0000037!5.63e-07!172;CL:0000566!5.63e-07!172;CL:0002087!5.65e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002127;3.45e-11;1!CL:0000911;3.45e-11;1!CL:0000814;3.45e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.28e-11,1;CL:0000914,3.28e-11,1;CL:0000911,3.28e-11,1;CL:0000814,3.28e-11,1;CL:0002042,3.28e-11,1;CL:0002039,3.28e-11,1;CL:0002040,3.28e-11,1;CL:0002041,3.28e-11,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:9119;1.30e-11;1!DOID:2355;3.45e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,1.18e-11,1;DOID:2355,4.91e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.44e-11!115;UBERON:0001042!2.91e-08!10;UBERON:0009145!2.91e-08!10;UBERON:0002370!1.10e-07!4;UBERON:0005058!1.10e-07!4;UBERON:0009113!1.10e-07!4;UBERON:0003295!1.10e-07!4;UBERON:0005562!1.10e-07!4;UBERON:0006562!2.09e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!3.44e-11!115;UBERON:0001042!2.91e-08!10;UBERON:0009145!2.91e-08!10;UBERON:0002370!1.10e-07!4;UBERON:0005058!1.10e-07!4;UBERON:0009113!1.10e-07!4;UBERON:0003295!1.10e-07!4;UBERON:0005562!1.10e-07!4;UBERON:0006562!2.09e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002426;1.30e-11;1!UBERON:0003831;1.30e-11;1!UBERON:0003898;1.30e-11;1!UBERON:0004830;1.30e-11;1!UBERON:0003830;1.30e-11;1!UBERON:0005175;1.30e-11;1!UBERON:0001774;1.30e-11;1!UBERON:0001103;1.30e-11;1!UBERON:0006834;3.45e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002426,1.31e-11,1;UBERON:0003831,1.31e-11,1;UBERON:0003898,1.31e-11,1;UBERON:0004830,1.31e-11,1;UBERON:0003830,1.31e-11,1;UBERON:0005175,1.31e-11,1;UBERON:0001774,1.31e-11,1;UBERON:0001103,1.31e-11,1;UBERON:0010084,1.31e-11,1;UBERON:0006834,3.63e-11,1 | |||
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| ||
|short_description=p15@ARHGEF3 | |short_description=p15@ARHGEF3 | ||
}} | }} |
Latest revision as of 03:53, 19 September 2015
Short description: | p15@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_ARHGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 111bp_to_uc011bew.1_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.28e-11 | 1 |
immature NK T cell | 3.28e-11 | 1 |
effector T cell | 3.28e-11 | 1 |
mature NK T cell | 3.28e-11 | 1 |
immature NK T cell stage IV | 3.28e-11 | 1 |
immature NK T cell stage I | 3.28e-11 | 1 |
immature NK T cell stage II | 3.28e-11 | 1 |
immature NK T cell stage III | 3.28e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
chest muscle | 1.31e-11 | 1 |
respiratory system muscle | 1.31e-11 | 1 |
skeletal muscle of trunk | 1.31e-11 | 1 |
respiratory system skeletal muscle | 1.31e-11 | 1 |
thoracic segment muscle | 1.31e-11 | 1 |
chest organ | 1.31e-11 | 1 |
muscle of trunk | 1.31e-11 | 1 |
diaphragm | 1.31e-11 | 1 |
future diaphragm | 1.31e-11 | 1 |
uterus or analog | 3.63e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 1.18e-11 | 1 |
anemia | 4.91e-11 | 1 |