FFCP PHASE1:Hg19::chr19:49220084..49220105,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284358 | |EntrezGene=284358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26689 | |HGNC=26689 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN01 | |UniProt=Q6ZN01 | ||
|association_with_transcript=108bp_to_ENST00000356751,NM_182574,uc002pkf.2_5end | |association_with_transcript=108bp_to_ENST00000356751,NM_182574,uc002pkf.2_5end | ||
|cluster_id=chr19:49220084..49220105,- | |||
|description=CAGE_peak_4_at_MAMSTR_5end | |description=CAGE_peak_4_at_MAMSTR_5end | ||
|id=chr19:49220084..49220105,- | |id=chr19:49220084..49220105,- | ||
|ontology_enrichment_celltype=CL:0000055!1.92e-13!180;CL:0000057!1.34e-10!75;CL:0002620!1.80e-08!23 | |ontology_enrichment_celltype=CL:0000055!1.92e-13!180;CL:0000057!1.34e-10!75;CL:0002620!1.80e-08!23 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.13e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.22e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.02e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.51e-17!94;UBERON:0001016!1.51e-17!94;UBERON:0005743!1.01e-15!86;UBERON:0000924!1.85e-15!173;UBERON:0006601!1.85e-15!173;UBERON:0001017!5.68e-15!82;UBERON:0000475!1.97e-14!365;UBERON:0001049!6.02e-14!57;UBERON:0005068!6.02e-14!57;UBERON:0006241!6.02e-14!57;UBERON:0007135!6.02e-14!57;UBERON:0002346!9.89e-14!90;UBERON:0004121!1.16e-13!169;UBERON:0000955!5.97e-13!69;UBERON:0006238!5.97e-13!69;UBERON:0002616!1.38e-12!59;UBERON:0003075!1.08e-11!86;UBERON:0007284!1.08e-11!86;UBERON:0001893!7.74e-11!34;UBERON:0002020!1.10e-10!34;UBERON:0003528!1.10e-10!34;UBERON:0000153!1.40e-10!129;UBERON:0007811!1.40e-10!129;UBERON:0000033!1.62e-10!123;UBERON:0002791!1.82e-10!33;UBERON:0000956!2.25e-10!25;UBERON:0000203!2.25e-10!25;UBERON:0001869!3.53e-10!32;UBERON:0002619!3.04e-09!22;UBERON:0002780!7.41e-09!41;UBERON:0001890!7.41e-09!41;UBERON:0006240!7.41e-09!41;UBERON:0003080!1.97e-08!42;UBERON:0001950!2.30e-08!20;UBERON:0007023!6.86e-08!115;UBERON:0000468!1.02e-07!659;UBERON:0003076!2.00e-07!15;UBERON:0003057!2.00e-07!15;UBERON:0003056!2.53e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.01e-10;4!UBERON:0000923;3.01e-10;4!UBERON:0010316;3.01e-10;4!UBERON:0005291;3.01e-10;4!UBERON:0002050;2.78e-08;5!UBERON:0005423;2.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0.369363174230364,0.816002764977012,0.313454721478088,0.286235987131057,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0.567208902984407,0.221729397462564,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.860509862246441,1.06400514659507,0.560677600142307,0,0,0,0.134710672069688,0.490385709340376,0.454072282934794,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.704606991862589,0.809364721840658,0.421352420106746,0.204154171254893,1.47401180774122,0.309977343527296,0,0,0,0,0.673344455816265,0.625592599359821,0.831192346452549,0,0.30648779579902,0.45071417671979,0.340296549480063,0.358779271377724,0.640672166455702,0.423863802319124,0.300091096084402,1.23663035086127,0,0.18611685633159,0,0.292311015483596,0.504867548488229,0.552299391853796,1.93975268182574,0.355009592516614,0.503760491138201,1.01736355386293,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825472625798197,0,0,0,0.308482478109971,0.600686115687835,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0.76228387266739,2.60279707715243,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,1.50051156317903,0.813795071099207,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,0,0,0,0.368738337083406,1.47702144595741,0.783204629850962,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.532685175939381,0.98552587216571,0.519254429183621,0.929683027679674,0,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0,0,1.06337790121334,0.308097234229289,0.15350367472613,0.275673144969061,0.644521469209642,0.725083469571143,0.426133137080504,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.744316738719335,0,0,1.535386747868,0.42793898803392,0.95460974377781,0,0.359744915166629,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0.545999645631943,0.141405431953713,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0.845086807596724,0.430234056612155,0,0,1.77380532035299,0.633322905892992,0,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,3.27673408723686,0,0,0,0.296964680832639,0,0,0.703347082052564,0,0,4.64475897881586,0,0.552567831062295,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.927680981618513,0,0,0.174919999992391,0,0,0,0,0.344743373241465,4.08246458736556,2.77799991893268,0,0.361789315876224,3.05163472634166,2.32216445855572,0.295547618953547,0.658156191461918,0,0,1.30815439456455,0.227884111694002,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.606610196826093,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0.443175571691151,0,0,0,0,0,0.229073192331831,0,0,0.745515213392595,0,0.407712618220842,0.209205692624666,0.101998217636322,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.604651252380536,0.360299883542404,0,0.315132729228895,0,0.0674035438541849,0,0,1.59045937961861,0.136203406111576,0,0,0.415440338029185,0,0,0.607495566580247,0,0,0.314727528809989,0,0,0,0,0,1.017074150619,0,0,0.653174720218818,0,0,0,0.453248366080503,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,1.22026264901963,0.751145584238999,0.573409195690071,0.443716206147409,0.124192805882767,3.18201860353331,0,0,0,0,0.936669811613763,3.33318365804898,0,0,0,0.757612021100357,0.251567901752575,0.889811221596536,0.228840068396924,0.604923695052956,0,0.295710299979268,0,0,0.155262956876259,0.829412415681711,0,0.521745061811734,0.601030435988874,0,0,0,0,0,0,0.800055529326307,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0.255788742607303,0.323474434190045,0.471797825567689,1.31051565830417,1.86705782949428,6.80239744325385,1.23935764259002,7.26238393365217,0,0,0,1.41070377476274,0,0.578063025868136,2.8339315265117,1.43670473151436,0.41023272848151,0.252071696221718,0.96820153449905,0.645902582527404,0,0,0,0,0,0,0,0.198916222116275,1.88025820873143,0.20170506870352,0,0,0.163771917510097,0,0.405225507710368,0,0.826747186004736,0.443910671357348,1.09394961803644,0,0.992422356778588,0.351742488719241,0,0,0,0,0,0,0,0,0.135939465953663,0.591954962065642,0,0,1.33438257845874,0,0,0,0,0,0.500335809236594,0,0.697448552208751,0,0,0,0,0.691259661814092,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,12.7579587447202,0.971421986118279,0,6.56537558032515,2.85408217866165,0,0,0,0,0.437119121007915,0,0.735444965261716,0,0.196308467114945,0.297046400327086,0.4226557275834,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,1.26217249754548,0.883889372481891,0.436350690340377,0,1.11598505450025,0.924351257262837,0.865253124247578,0.630832124175395,0,0,0.101988829741982,0,0,0,1.28823786971007,1.87574891109325,0,0.310298987585686,0.213233981900981,1.42838658878244,0,0.0620747142958579,0.224263725161227,0,0.606351566874658,0,0,0.0673520530145875,0,0.665320713092027,0,0,0,0,2.34640942403454,0.611207220914332,0.406896178315738,0.665756774185513,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0.261185628199839,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0.369363174230364,0.816002764977012,0.313454721478088,0.286235987131057,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0.486634870302636,0.567208902984407,0.221729397462564,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0,0.860509862246441,1.06400514659507,0.560677600142307,0,0,0,0.134710672069688,0.490385709340376,0.454072282934794,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0.704606991862589,0.809364721840658,0.421352420106746,0.204154171254893,1.47401180774122,0.309977343527296,0,0,0,0,0.673344455816265,0.625592599359821,0.831192346452549,0,0.30648779579902,0.45071417671979,0.340296549480063,0.358779271377724,0.640672166455702,0.423863802319124,0.300091096084402,1.23663035086127,0,0.18611685633159,0,0.292311015483596,0.504867548488229,0.552299391853796,1.93975268182574,0.355009592516614,0.503760491138201,1.01736355386293,0,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,0,0.928735856063958,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825472625798197,0,0,0,0.308482478109971,0.600686115687835,0,0.112131084345361,0,0.22001485746285,0.129271715757778,0,0,0,1.04007436911366,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0.358121926479791,0,0,0,0,0.76228387266739,2.60279707715243,0,0.167516265334349,1.27587750330633,0,0,0,0.12269149171914,1.50051156317903,0.813795071099207,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0.902838299183157,0,0,0,0.368738337083406,1.47702144595741,0.783204629850962,0.686286847621712,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.462629081407967,0.532685175939381,0.98552587216571,0.519254429183621,0.929683027679674,0,0,0,0.114814448164607,0.364182336013434,0.262248829918848,0,0,0,0,0,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,0,0.325378394664303,0,0,0,0,0,0,1.06337790121334,0.308097234229289,0.15350367472613,0.275673144969061,0.644521469209642,0.725083469571143,0.426133137080504,0.178064071293475,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.744316738719335,0,0,1.535386747868,0.42793898803392,0.95460974377781,0,0.359744915166629,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0.48763373908959,0.487426979262569,0,0.545999645631943,0.141405431953713,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0.845086807596724,0.430234056612155,0,0,1.77380532035299,0.633322905892992,0,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,3.27673408723686,0,0,0,0.296964680832639,0,0,0.703347082052564,0,0,4.64475897881586,0,0.552567831062295,0,0,0,0,0,0,0,0.493217028184668,0,0,0.969332746095218,0.927680981618513,0,0,0.174919999992391,0,0,0,0,0.344743373241465,4.08246458736556,2.77799991893268,0,0.361789315876224,3.05163472634166,2.32216445855572,0.295547618953547,0.658156191461918,0,0,1.30815439456455,0.227884111694002,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.606610196826093,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,0.17472666824203,0.859930162358083,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0.443175571691151,0,0,0,0,0,0.229073192331831,0,0,0.745515213392595,0,0.407712618220842,0.209205692624666,0.101998217636322,0,0,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.604651252380536,0.360299883542404,0,0.315132729228895,0,0.0674035438541849,0,0,1.59045937961861,0.136203406111576,0,0,0.415440338029185,0,0,0.607495566580247,0,0,0.314727528809989,0,0,0,0,0,1.017074150619,0,0,0.653174720218818,0,0,0,0.453248366080503,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0.886068179966986,1.22026264901963,0.751145584238999,0.573409195690071,0.443716206147409,0.124192805882767,3.18201860353331,0,0,0,0,0.936669811613763,3.33318365804898,0,0,0,0.757612021100357,0.251567901752575,0.889811221596536,0.228840068396924,0.604923695052956,0,0.295710299979268,0,0,0.155262956876259,0.829412415681711,0,0.521745061811734,0.601030435988874,0,0,0,0,0,0,0.800055529326307,0.343395705182793,1.01024846629776,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0.567515953566836,0.368211900503681,0,0,0.255788742607303,0.323474434190045,0.471797825567689,1.31051565830417,1.86705782949428,6.80239744325385,1.23935764259002,7.26238393365217,0,0,0,1.41070377476274,0,0.578063025868136,2.8339315265117,1.43670473151436,0.41023272848151,0.252071696221718,0.96820153449905,0.645902582527404,0,0,0,0,0,0,0,0.198916222116275,1.88025820873143,0.20170506870352,0,0,0.163771917510097,0,0.405225507710368,0,0.826747186004736,0.443910671357348,1.09394961803644,0,0.992422356778588,0.351742488719241,0,0,0,0,0,0,0,0,0.135939465953663,0.591954962065642,0,0,1.33438257845874,0,0,0,0,0,0.500335809236594,0,0.697448552208751,0,0,0,0,0.691259661814092,0,0.118332000730565,0.170426809518315,0.423387050190929,0,0,0,0,0,0,0,0.205325613712494,12.7579587447202,0.971421986118279,0,6.56537558032515,2.85408217866165,0,0,0,0,0.437119121007915,0,0.735444965261716,0,0.196308467114945,0.297046400327086,0.4226557275834,0.169927114687817,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,1.26217249754548,0.883889372481891,0.436350690340377,0,1.11598505450025,0.924351257262837,0.865253124247578,0.630832124175395,0,0,0.101988829741982,0,0,0,1.28823786971007,1.87574891109325,0,0.310298987585686,0.213233981900981,1.42838658878244,0,0.0620747142958579,0.224263725161227,0,0.606351566874658,0,0,0.0673520530145875,0,0.665320713092027,0,0,0,0,2.34640942403454,0.611207220914332,0.406896178315738,0.665756774185513,0,0 | ||
|short_description=p4@MAMSTR | |short_description=p4@MAMSTR | ||
}} | }} |
Latest revision as of 03:53, 19 September 2015
Short description: | p4@MAMSTR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAMSTR_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENST00000356751, NM_182574, uc002pkf.2_5end |
EntrezGene: | MAMSTR |
HGNC: | 26689 |
UniProt: | Q6ZN01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.02e-10 | 10 |