FFCP PHASE1:Hg19::chr22:19868903..19868916,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18155 | |HGNC=18155 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000462330_5end | |association_with_transcript=-11bp_to_ENST00000462330_5end | ||
|cluster_id=chr22:19868903..19868916,- | |||
|coexpression_cluster_id=C15 | |coexpression_cluster_id=C15 | ||
|description=CAGE_peak_7_at_TXNRD2_5end | |description=CAGE_peak_7_at_TXNRD2_5end | ||
|id=chr22:19868903..19868916,- | |id=chr22:19868903..19868916,- | ||
|ontology_enrichment_celltype=CL:0002139!1.34e-11!24;CL:0000213!1.28e-10!57;CL:0000215!1.28e-10!57;CL:0002078!3.49e-09!44;CL:0000115!1.63e-08!35;CL:0000071!1.30e-07!18;CL:0002546!1.30e-07!18 | |ontology_enrichment_celltype=CL:0002139!1.34e-11!24;CL:0000213!1.28e-10!57;CL:0000215!1.28e-10!57;CL:0002078!3.49e-09!44;CL:0000115!1.63e-08!35;CL:0000071!1.30e-07!18;CL:0002546!1.30e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000213;2.05e-10;58!CL:0000215;2.05e-10;58!CL:0002078;2.07e-10;45!CL:0000115;3.61e-09;36!CL:0002139;1.04e-07;24!CL:0002545;6.07e-07;2!CL:0002097;9.01e-07;2!CL:0002549;9.01e-07;2!CL:0002367;9.01e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,7.47e-18,58;CL:0000215,7.47e-18,58;CL:0002078,5.66e-15,45;CL:0000115,9.42e-11,36;CL:0000076,4.38e-08,63;CL:0000222,7.36e-08,121;CL:0002139,1.18e-07,24;CL:0002545,6.07e-07,2;CL:0002097,6.80e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3193;9.01e-07;2!DOID:962;9.01e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,7.61e-07,2;DOID:962,7.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.30e-07!18;UBERON:0004638!1.30e-07!18;UBERON:0004852!1.30e-07!18;UBERON:0000956!4.76e-07!25;UBERON:0000203!4.76e-07!25 | |ontology_enrichment_uberon=UBERON:0001986!1.30e-07!18;UBERON:0004638!1.30e-07!18;UBERON:0004852!1.30e-07!18;UBERON:0000956!4.76e-07!25;UBERON:0000203!4.76e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0006914;1.77e-07;25!UBERON:0005800;6.07e-07;2!UBERON:0001515;6.07e-07;2!UBERON:0003714;9.01e-07;2!UBERON:0005629;9.01e-07;2!UBERON:0005358;9.01e-07;2!UBERON:0005969;9.01e-07;2!UBERON:0001886;9.01e-07;2!UBERON:0004086;9.01e-07;2!UBERON:0005282;9.01e-07;2!UBERON:0005281;9.01e-07;2!UBERON:0003956;9.01e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006914,1.80e-07,25;UBERON:0005800,6.07e-07,2;UBERON:0001515,6.07e-07,2;UBERON:0003714,7.61e-07,2 | |||
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| ||
|short_description=p7@TXNRD2 | |short_description=p7@TXNRD2 | ||
}} | }} |
Latest revision as of 03:50, 19 September 2015
Short description: | p7@TXNRD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TXNRD2_5end |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | -11bp_to_ENST00000462330_5end |
EntrezGene: | NA |
HGNC: | 18155 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 7.47e-18 | 58 |
barrier cell | 7.47e-18 | 58 |
meso-epithelial cell | 5.66e-15 | 45 |
endothelial cell | 9.42e-11 | 36 |
squamous epithelial cell | 4.38e-08 | 63 |
mesodermal cell | 7.36e-08 | 121 |
endothelial cell of vascular tree | 1.18e-07 | 24 |
thoracic aorta endothelial cell | 6.07e-07 | 2 |
cortical cell of adrenal gland | 6.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
squamous epithelium | 1.80e-07 | 25 |
segment of aorta | 6.07e-07 | 2 |
thoracic aorta | 6.07e-07 | 2 |
neural tissue | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 7.61e-07 | 2 |
neurofibroma | 7.61e-07 | 2 |