FFCP PHASE1:Hg19::chr3:56835967..56835985,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50650 | |EntrezGene=50650 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=683 | |HGNC=683 | ||
|TSSclassifier=strong | |||
|UniProt=C9J586 | |UniProt=C9J586 | ||
|association_with_transcript=0bp_to_ENST00000465659,ENST00000495373_5end | |association_with_transcript=0bp_to_ENST00000465659,ENST00000495373_5end | ||
|cluster_id=chr3:56835967..56835985,- | |||
|description=CAGE_peak_1_at_ARHGEF3_5end | |description=CAGE_peak_1_at_ARHGEF3_5end | ||
|id=chr3:56835967..56835985,- | |id=chr3:56835967..56835985,- | ||
|ontology_enrichment_celltype=CL:0002087!5.82e-16!119;CL:0000738!2.26e-13!140;CL:0002031!7.42e-12!124;CL:0000791!4.76e-11!18;CL:0000789!4.76e-11!18;CL:0002420!4.76e-11!18;CL:0002419!4.76e-11!18;CL:0000790!4.76e-11!18;CL:0002057!1.39e-10!42;CL:0000838!1.27e-08!52;CL:0000860!1.53e-08!45;CL:0000542!5.44e-08!53;CL:0000051!5.44e-08!53;CL:0000625!8.41e-08!11;CL:0002194!1.42e-07!63;CL:0000576!1.42e-07!63;CL:0000040!1.42e-07!63;CL:0000559!1.42e-07!63;CL:0000037!4.49e-07!172;CL:0000566!4.49e-07!172;CL:0002009!5.50e-07!65 | |ontology_enrichment_celltype=CL:0002087!5.82e-16!119;CL:0000738!2.26e-13!140;CL:0002031!7.42e-12!124;CL:0000791!4.76e-11!18;CL:0000789!4.76e-11!18;CL:0002420!4.76e-11!18;CL:0002419!4.76e-11!18;CL:0000790!4.76e-11!18;CL:0002057!1.39e-10!42;CL:0000838!1.27e-08!52;CL:0000860!1.53e-08!45;CL:0000542!5.44e-08!53;CL:0000051!5.44e-08!53;CL:0000625!8.41e-08!11;CL:0002194!1.42e-07!63;CL:0000576!1.42e-07!63;CL:0000040!1.42e-07!63;CL:0000559!1.42e-07!63;CL:0000037!4.49e-07!172;CL:0000566!4.49e-07!172;CL:0002009!5.50e-07!65 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.30e-11;18!CL:0000789;4.30e-11;18!CL:0002419;4.30e-11;18!CL:0000625;7.89e-08;11!CL:0000860;1.32e-07;33!CL:0002057;1.32e-07;33!CL:0000473;2.85e-07;39!CL:0000234;2.85e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.46e-17,115;CL:0000738,1.21e-14,136;CL:0002031,4.03e-13,120;CL:0000473,3.09e-11,48;CL:0000234,3.09e-11,48;CL:0000791,4.51e-11,18;CL:0000789,4.51e-11,18;CL:0002420,4.51e-11,18;CL:0002419,4.51e-11,18;CL:0000790,4.51e-11,18;CL:0000860,1.33e-10,42;CL:0002057,1.33e-10,42;CL:0002194,5.46e-09,59;CL:0000576,5.46e-09,59;CL:0000040,5.46e-09,59;CL:0000559,5.46e-09,59;CL:0000838,1.17e-08,52;CL:0002009,2.74e-08,61;CL:0000037,4.06e-08,168;CL:0000542,5.12e-08,53;CL:0000051,5.12e-08,53;CL:0000625,8.13e-08,11;CL:0000766,2.28e-07,72;CL:0002032,4.33e-07,161;CL:0000837,4.33e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000790;4.30e-11;18!CL:0002057;5.49e-08;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.41e-29!115;UBERON:0001049!3.36e-15!57;UBERON:0005068!3.36e-15!57;UBERON:0006241!3.36e-15!57;UBERON:0007135!3.36e-15!57;UBERON:0003075!4.41e-15!86;UBERON:0007284!4.41e-15!86;UBERON:0002780!1.00e-14!41;UBERON:0001890!1.00e-14!41;UBERON:0006240!1.00e-14!41;UBERON:0003080!1.21e-14!42;UBERON:0002346!3.97e-14!90;UBERON:0003056!8.42e-14!61;UBERON:0002616!1.87e-13!59;UBERON:0005743!5.26e-13!86;UBERON:0001869!3.92e-12!32;UBERON:0001893!3.97e-12!34;UBERON:0002619!1.25e-11!22;UBERON:0001017!1.25e-11!82;UBERON:0000955!1.33e-11!69;UBERON:0006238!1.33e-11!69;UBERON:0002791!1.44e-11!33;UBERON:0000073!1.82e-11!94;UBERON:0001016!1.82e-11!94;UBERON:0002020!2.16e-11!34;UBERON:0003528!2.16e-11!34;UBERON:0000153!2.88e-11!129;UBERON:0007811!2.88e-11!129;UBERON:0001950!7.30e-11!20;UBERON:0000956!5.22e-10!25;UBERON:0000203!5.22e-10!25;UBERON:0000033!9.65e-10!123;UBERON:0002390!1.10e-07!102;UBERON:0003061!1.10e-07!102;UBERON:0004121!1.40e-07!169;UBERON:0002193!1.92e-07!112;UBERON:0000924!2.98e-07!173;UBERON:0006601!2.98e-07!173 | |ontology_enrichment_uberon=UBERON:0007023!3.41e-29!115;UBERON:0001049!3.36e-15!57;UBERON:0005068!3.36e-15!57;UBERON:0006241!3.36e-15!57;UBERON:0007135!3.36e-15!57;UBERON:0003075!4.41e-15!86;UBERON:0007284!4.41e-15!86;UBERON:0002780!1.00e-14!41;UBERON:0001890!1.00e-14!41;UBERON:0006240!1.00e-14!41;UBERON:0003080!1.21e-14!42;UBERON:0002346!3.97e-14!90;UBERON:0003056!8.42e-14!61;UBERON:0002616!1.87e-13!59;UBERON:0005743!5.26e-13!86;UBERON:0001869!3.92e-12!32;UBERON:0001893!3.97e-12!34;UBERON:0002619!1.25e-11!22;UBERON:0001017!1.25e-11!82;UBERON:0000955!1.33e-11!69;UBERON:0006238!1.33e-11!69;UBERON:0002791!1.44e-11!33;UBERON:0000073!1.82e-11!94;UBERON:0001016!1.82e-11!94;UBERON:0002020!2.16e-11!34;UBERON:0003528!2.16e-11!34;UBERON:0000153!2.88e-11!129;UBERON:0007811!2.88e-11!129;UBERON:0001950!7.30e-11!20;UBERON:0000956!5.22e-10!25;UBERON:0000203!5.22e-10!25;UBERON:0000033!9.65e-10!123;UBERON:0002390!1.10e-07!102;UBERON:0003061!1.10e-07!102;UBERON:0004121!1.40e-07!169;UBERON:0002193!1.92e-07!112;UBERON:0000924!2.98e-07!173;UBERON:0006601!2.98e-07!173 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.11e-11;22!UBERON:0001869;5.79e-11;32!UBERON:0001950;6.67e-11;20!UBERON:0002780;9.35e-11;41!UBERON:0001890;9.35e-11;41!UBERON:0001893;1.40e-10;34!UBERON:0002791;2.45e-10;32!UBERON:0003528;5.18e-10;34!UBERON:0002020;5.18e-10;34!UBERON:0000956;5.40e-10;25!UBERON:0000203;5.40e-10;25!UBERON:0000073;6.29e-09;53!UBERON:0002616;6.29e-09;53!UBERON:0007023;2.54e-08;114 | |||
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| ||
|short_description=p1@ARHGEF3 | |short_description=p1@ARHGEF3 | ||
}} | }} |
Latest revision as of 03:49, 19 September 2015
Short description: | p1@ARHGEF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGEF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000465659, ENST00000495373_5end |
EntrezGene: | ARHGEF3 |
HGNC: | 683 |
UniProt: | C9J586 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.46e-17 | 115 |
leukocyte | 1.21e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 4.03e-13 | 120 |
defensive cell | 3.09e-11 | 48 |
phagocyte | 3.09e-11 | 48 |
mature alpha-beta T cell | 4.51e-11 | 18 |
alpha-beta T cell | 4.51e-11 | 18 |
immature T cell | 4.51e-11 | 18 |
mature T cell | 4.51e-11 | 18 |
immature alpha-beta T cell | 4.51e-11 | 18 |
classical monocyte | 1.33e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.33e-10 | 42 |
monopoietic cell | 5.46e-09 | 59 |
monocyte | 5.46e-09 | 59 |
monoblast | 5.46e-09 | 59 |
promonocyte | 5.46e-09 | 59 |
lymphoid lineage restricted progenitor cell | 1.17e-08 | 52 |
macrophage dendritic cell progenitor | 2.74e-08 | 61 |
hematopoietic stem cell | 4.06e-08 | 168 |
lymphocyte | 5.12e-08 | 53 |
common lymphoid progenitor | 5.12e-08 | 53 |
CD8-positive, alpha-beta T cell | 8.13e-08 | 11 |
myeloid leukocyte | 2.28e-07 | 72 |
hematopoietic oligopotent progenitor cell | 4.33e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.33e-07 | 161 |