FFCP PHASE1:Hg19::chr1:183559575..183559602,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:183559575..183559602,- to FFCP PHASE1:Hg19::chr1:183559575..183559602,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4688 | |EntrezGene=4688 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7661 | |HGNC=7661 | ||
|TSSclassifier=strong | |||
|UniProt=P19878 | |UniProt=P19878 | ||
|association_with_transcript=113bp_to_ENST00000367535_5end | |||
|cluster_id=chr1:183559575..183559602,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_NCF2_5end | |||
|id=chr1:183559575..183559602,- | |||
|ontology_enrichment_celltype=CL:0000738!1.31e-46!140;CL:0000037!1.40e-46!172;CL:0000566!1.40e-46!172;CL:0002032!4.15e-44!165;CL:0000837!4.15e-44!165;CL:0000988!2.52e-43!182;CL:0002087!1.00e-42!119;CL:0002031!1.12e-37!124;CL:0002009!7.78e-36!65;CL:0000766!1.08e-35!76;CL:0002194!6.51e-35!63;CL:0000576!6.51e-35!63;CL:0000040!6.51e-35!63;CL:0000559!6.51e-35!63;CL:0000763!1.02e-34!112;CL:0000049!1.02e-34!112;CL:0002057!3.05e-31!42;CL:0000557!4.79e-31!71;CL:0000839!9.54e-30!70;CL:0000860!7.84e-29!45;CL:0000542!8.85e-09!53;CL:0000051!8.85e-09!53;CL:0000838!1.65e-08!52;CL:0000945!2.23e-07!24;CL:0000826!2.23e-07!24;CL:0000094!3.00e-07!8;CL:0002393!4.50e-07!9;CL:0002397!4.50e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.98e-28;33!CL:0002057;2.98e-28;33!CL:0000473;1.33e-27;39!CL:0000234;1.33e-27;39!CL:0000576;2.87e-26;48!CL:0000766;5.26e-20;69!CL:0002087;2.66e-14;104!CL:0000763;3.33e-13;100!CL:0000738;1.34e-12;136!CL:0000988;4.24e-09;177!CL:0000094;1.52e-08;8!CL:0000945;1.31e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.77e-55,136;CL:0000037,1.06e-53,168;CL:0000988,1.42e-51,177;CL:0002032,1.54e-50,161;CL:0000837,1.54e-50,161;CL:0002087,3.01e-50,115;CL:0000766,1.39e-48,72;CL:0002009,4.10e-48,61;CL:0002194,5.26e-47,59;CL:0000576,5.26e-47,59;CL:0000040,5.26e-47,59;CL:0000559,5.26e-47,59;CL:0000763,1.35e-43,108;CL:0000049,1.35e-43,108;CL:0002031,1.58e-43,120;CL:0000473,8.51e-43,48;CL:0000234,8.51e-43,48;CL:0000557,1.28e-42,67;CL:0000839,4.14e-39,66;CL:0000860,5.61e-38,42;CL:0002057,5.61e-38,42;CL:0000094,1.54e-08,8;CL:0002393,2.53e-08,9;CL:0002397,2.53e-08,9;CL:0000542,1.06e-07,53;CL:0000051,1.06e-07,53;CL:0000945,1.27e-07,24;CL:0000826,1.27e-07,24;CL:0000838,2.11e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;2.06e-27;42!CL:0000049;3.86e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.85e-36!102;UBERON:0003061!2.85e-36!102;UBERON:0002193!1.71e-32!112;UBERON:0002371!7.62e-26!80;UBERON:0001474!2.12e-22!86;UBERON:0007023!1.06e-17!115;UBERON:0002405!1.16e-17!115;UBERON:0004765!6.19e-17!101;UBERON:0001434!6.19e-17!101;UBERON:0000178!6.39e-10!15;UBERON:0000179!6.39e-10!15;UBERON:0000463!6.39e-10!15;UBERON:0003081!4.22e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.05e-11;15!UBERON:0000179;1.05e-11;15!UBERON:0000463;1.05e-11;15!UBERON:0002390;5.77e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.59e-49,98;UBERON:0003061,3.59e-49,98;UBERON:0002193,8.77e-44,108;UBERON:0002371,1.10e-36,76;UBERON:0002405,4.24e-33,93;UBERON:0001474,6.02e-32,82;UBERON:0004765,7.71e-28,90;UBERON:0001434,4.22e-23,100;UBERON:0003081,4.09e-16,203;UBERON:0000178,8.31e-12,15;UBERON:0000179,8.31e-12,15;UBERON:0000463,8.31e-12,15;UBERON:0007023,1.25e-10,114;UBERON:0002204,1.13e-08,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,10.7572023432284,0,0,0,0,0,0,0,0,0,62.1240988730844,63.7100574131579,59.1905075478868,300.530307512563,168.501105764676,152.184249219703,0.919421224478927,1.204823675113,6.65557218300218,0.232401601740905,0,1.46800219667424,250.405924656409,249.878381547797,175.344783538408,47.246165064624,67.3698825319478,51.5151135268373,729.172167479517,617.449291987515,578.077817810566,748.886356910116,614.69599259263,557.781173982082,660.82942516398,625.800606050593,516.240707846782,796.017776820852,573.190399022438,460.450054420762,689.531689744561,591.387627175352,575.966290632752,762.148892003547,689.997408213601,542.157882677587,557.44869731555,607.965228430734,500.387857125383,1421.15464156418,1038.31496118479,669.533917670243,684.150115494112,521.482918420201,528.203270322844,1515.92035459396,1243.30529909402,906.981202405575,268.082958329854,325.497183246482,252.009691901068,433.139201700885,425.150783634304,348.613797545967,263.351775216914,252.823096720044,214.995708980974,1.75996244461323,17.4764355603882,7.11607403090844,25.1770831314239,6.4063357925762,9.77079147922622,14.542987201267,4.77026877267682,2.27685187643779,7.04684627245127,2.29363936875137,2.64342657158052,35.3120394678368,4.47752944117631,0.590129310341499,0,2.05601498999509,3.67810289859492,0.32592226663359,0,0,2.89667187901451,1.47302953737419,0,0.270803863765016,3.20228299314188,1.8208308658383,0.328875809207352,1.93445012450094,1.15921234294021,0.296573126324121,0,2.09071047609954,2.03956816855619,0.766440987203842,2.06176467289578,1.77113784413652,9.5569624297229,1.30216690771284,0.950452044448374,16.2621128603995,8.44711633619161,22.4875307794223,35.9901423106906,10.6746639599736,0.201606743224732,0.534880391567015,0,2.43806866313962,0,0,0,0,0.144846518960824,0,0,0,0,1.05401742831751,9.03755620934217,0.364295288292542,0,260.936104498365,263.458292533791,337.580261757399,15.2633999555419,13.1558829479429,5.20040501861391,0,0,0,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,905.331467785755,1097.41814753976,0.872188104285069,0,0.12663051166458,0,0,4.61068896857864,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,11.0158686303079,4.90943017063502,1.43402297694502,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,1.18009283054671,0.482022059766964,1.7647035637183,1.30727666455444,0.474541238222193,2.69662616320329,0.98110732562673,0.769494313892781,0,0,0,0,0,2.94848165003288,0.590789906681404,0,0,0,0.878002283269004,8.99214026060957,1.91005047582099,0,0.977424915930974,0,0,0,0,0,0.462985512576611,0.380508304469197,0,0,184.170320553373,626.1954135126,417.504934869038,9.3733833986777,0.503946384596579,0.567100388969546,0.806026704325635,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,107.028926964248,82.3701629948687,183.425527350238,0,0,0,0,0,0,0,12.6099686529233,0.215627574859517,8.85566950330264,0,1.30139853857622,0,0.502548796003046,0.637938751653163,1145.98074663919,1331.26849345791,1644.81517282762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,130.263856457419,149.921369568939,101.604635028879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.61694032508968,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,11.8497163394881,0,0,1.72279661398852,0.650060246036521,0,0.193341436584244,0,0,0,0,0,1.44885266607372,0,4.13212288402445,0.192190067365106,0.255225424989168,1.4162089319777,0,0,0,1.23213432070436,0.532306030317022,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,9.914351939192,0,0,0,0,0,1.47775344708365,0,0,0,3.1753297199419,2.01090682660736,1.08890984861323,12.5211255033116,0,0,2.66058092122005,0.918893600827838,364.85483103793,340.263557178357,464.832104734117,352.821259452985,403.957752170643,366.387420823885,313.218233598107,402.114464381195,0,0,1.47024129588619,3.15865397713722,0,0,0,2.19537308576098,34.2794612536936,1.05836791361941,13.9587434318059,8.42391534340376,11.1834992726264,1.56679895773023,7.51903431270201,0.677167111206413,5.13881840331838,9.08098682359714,5.96184732766457,10.6486656874287,6.14481528616916,10.5127770709435,6.84081481018825,13.8725547735449,0,0,0,0,0,0,13.4787524930142,0,8.69258397364331,0,0,2.96964680832639,0,0,1.68803299692615,0,0,0,4.18420775327246,3.31540698637377,0,0,92.06743448488,0,0.898683511473268,0,1.53471711068062,2.56472854656027,215.534783112246,0,0.969332746095218,1.20598527610407,0,0,0,0.724999575434793,0.227586896570999,0.762760950878299,0,0,0,0,0.885741385813839,1.32656082487949,0,0.442317039724898,0.295547618953547,1.53569778007781,0.10893846351899,0.975966209950223,2.00070672109872,0,0,0,0,1.27600463892768,1.00757352742049,1.06606955203727,0,3.1396051279005,0.498635045700469,0,0,0,0,0,0,0,0,0,0.995261931078505,1.50377859655677,1.83309043480088,2.96521128680622,3.70691816839509,4.80340967725095,1.68502832451693,2.40773294189637,0.702793337176017,0.182454789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| ||
|short_description=p1@NCF2 | |||
}} | }} |
Latest revision as of 03:34, 19 September 2015
Short description: | p1@NCF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCF2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 113bp_to_ENST00000367535_5end |
EntrezGene: | NCF2 |
HGNC: | 7661 |
UniProt: | P19878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.59e-49 | 98 |
blood island | 3.59e-49 | 98 |
hemolymphoid system | 8.77e-44 | 108 |
bone marrow | 1.10e-36 | 76 |
immune system | 4.24e-33 | 93 |
bone element | 6.02e-32 | 82 |
skeletal element | 7.71e-28 | 90 |
skeletal system | 4.22e-23 | 100 |
lateral plate mesoderm | 4.09e-16 | 203 |
blood | 8.31e-12 | 15 |
haemolymphatic fluid | 8.31e-12 | 15 |
organism substance | 8.31e-12 | 15 |
adult organism | 1.25e-10 | 114 |
musculoskeletal system | 1.13e-08 | 167 |