FFCP PHASE1:Hg19::chr2:98703643..98703674,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=200403 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28385 | |||
|TSSclassifier=strong | |||
|UniProt=F8WD48,Q502W6 | |||
|association_with_transcript=0bp_to_ENST00000409460,ENST00000448079,ENST00000448638,ENST00000477737_5end | |||
|cluster_id=chr2:98703643..98703674,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_VWA3B_5end | |||
|id=chr2:98703643..98703674,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.63e-16!42;CL:0000860!1.05e-14!45;CL:0002194!5.45e-11!63;CL:0000576!5.45e-11!63;CL:0000040!5.45e-11!63;CL:0000559!5.45e-11!63;CL:0002009!2.04e-10!65;CL:0000766!1.60e-09!76;CL:0000839!3.85e-09!70;CL:0000557!6.56e-09!71;CL:0002087!9.83e-08!119;CL:0000738!2.72e-07!140;CL:0002393!3.17e-07!9;CL:0002397!3.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.08e-12;33!CL:0002057;2.08e-12;33!CL:0000473;2.34e-08;39!CL:0000234;2.34e-08;39!CL:0000576;6.39e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.01e-09,42;CL:0002057,1.01e-09,42;CL:0000473,2.28e-08,48;CL:0000234,2.28e-08,48 | |||
|ontology_enrichment_development_v019=UBERON:0006222;3.40e-08;1!CL:0002057;1.30e-07;42!UBERON:0009117;3.81e-07;10!UBERON:0005564;3.81e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.24e-07!115;UBERON:0002371!4.10e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;8.04e-16;2!UBERON:0003127;1.25e-15;2!UBERON:0002171;1.06e-08;1!UBERON:0006518;1.06e-08;1!UBERON:0008949;1.06e-08;1!UBERON:0000101;1.06e-08;1!UBERON:0002167;1.06e-08;1!UBERON:0001301;1.98e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,8.04e-16,2;UBERON:0003127,1.35e-15,2;UBERON:0002171,1.10e-08,1;UBERON:0006518,1.10e-08,1;UBERON:0008949,1.10e-08,1;UBERON:0000101,1.10e-08,1;UBERON:0002167,1.10e-08,1;UBERON:0001301,2.29e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0.401088894940283,0.434021741431704,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0,2.58923153089935,2.0492856522328,2.60130452877444,0.344745680736619,0.645484683583826,0,0,0,0,0,0.320929027076094,0,0.329851300186716,3.19141852194611,5.11469700639233,0,0,0,1.50749199154046,1.5644487552606,2.38907729175628,0.605399502633369,0,0,0.211255286311942,0,0.419317291016752,0.22465726229299,0.150176892841506,0.48217676009124,0.285012743741249,0.19891667719909,0.547992461293902,0,0,0,0.853460445133014,0,0,0.661044872784862,0,5.12291672198504,2.34894875748376,3.05818582500183,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.85874452986276,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.557409525377156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.834245708559542,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,3.38721580026819,0.276283915531148,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0.236387681767936,0.689486746482929,0,0,0.885741385813839,0.241192877250816,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0.217294743844016,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.176915129006678,0,0,0,0,0.67401132980677,0,1.1713222286267,0.182454789215666,0.391329237864179,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.27144668714639,0,0,0,0,0,0,0,0,0.19871461170299,0,0.391102765469606,0,0.426905989478705,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.904980694530854,0.52893040697076,0,0,2.24253566392159,8.01741956008296,4.14239055347196,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,2.86704597845036,0.776503360757966,0.558867626472451,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0,0.161475645631851,0,0,0.11796972334774,0,0.115525666150338,0,0,0,1.50420656698514,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0.455324382702595,0.0887023701626388,0,0,0.0679697329768317,0,0,0.111231401892069,0,0,1.12108865325516,0,0,0,0,0.158013611732727,0.581207126840626,0,0,0,0,0,0,0.118332000730565,0,0,0.68732060563215,0,0.955538938977433,0,0,0,0,0,0,0,0.233939463462106,0,0.237840181555137,0,0,0.452888530700021,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0,0.26721740526556,0,0,12.2761491113548,31.8877314885852,0.829169439458779,0.20686599172379,4.69114760182158,7.85612623830343,0,0,0,0,0,0.217716747896961,0.342233301085281,0.0673520530145875,9.3956089064406,2.32862249582209,0,0,0,0.0898252021065869,0,0.488965776731466,0.406896178315738,0,0,0 | |||
|short_description=p1@VWA3B | |||
}} |
Latest revision as of 03:32, 19 September 2015
Short description: | p1@VWA3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VWA3B_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000409460, ENST00000448079, ENST00000448638, ENST00000477737_5end |
EntrezGene: | VWA3B |
HGNC: | 28385 |
UniProt: | F8WD48Q502W6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.01e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.01e-09 | 42 |
defensive cell | 2.28e-08 | 48 |
phagocyte | 2.28e-08 | 48 |
Ontology term | p-value | n |
---|---|---|
throat | 8.04e-16 | 2 |
open tracheal system trachea | 1.35e-15 | 2 |
lower lobe of right lung | 1.10e-08 | 1 |
right lung lobe | 1.10e-08 | 1 |
lower lobe of lung | 1.10e-08 | 1 |
lobe of lung | 1.10e-08 | 1 |
right lung | 1.10e-08 | 1 |
epididymis | 2.29e-08 | 1 |