FFCP PHASE1:Hg19::chr2:98612649..98612705,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:98612649..98612705,- to FFCP PHASE1:Hg19::chr2:98612649..98612705,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23505 | |EntrezGene=23505 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30366 | |HGNC=30366 | ||
|TSSclassifier=strong | |||
|UniProt=B4DMG2 | |UniProt=B4DMG2 | ||
|association_with_transcript=-261bp_to_ENST00000425805_5end | |||
|cluster_id=chr2:98612649..98612705,- | |||
|description=CAGE_peak_3_at_TMEM131_5end | |||
|id=chr2:98612649..98612705,- | |||
|ontology_enrichment_celltype=CL:0000451!3.36e-07!10;CL:0000990!6.15e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000451;1.27e-07;10!CL:0000990;2.50e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000451,2.00e-07,10;CL:0000990,3.75e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001869!2.92e-12!32;UBERON:0000924!1.13e-11!173;UBERON:0006601!1.13e-11!173;UBERON:0002780!1.26e-11!41;UBERON:0001890!1.26e-11!41;UBERON:0006240!1.26e-11!41;UBERON:0001893!4.87e-11!34;UBERON:0002616!5.48e-11!59;UBERON:0002020!5.52e-11!34;UBERON:0003528!5.52e-11!34;UBERON:0001049!6.58e-11!57;UBERON:0005068!6.58e-11!57;UBERON:0006241!6.58e-11!57;UBERON:0007135!6.58e-11!57;UBERON:0001017!9.83e-11!82;UBERON:0003080!1.08e-10!42;UBERON:0004121!1.47e-10!169;UBERON:0002791!1.61e-10!33;UBERON:0000955!1.66e-10!69;UBERON:0006238!1.66e-10!69;UBERON:0005743!3.04e-10!86;UBERON:0000073!3.14e-10!94;UBERON:0001016!3.14e-10!94;UBERON:0002346!9.86e-10!90;UBERON:0000033!1.41e-09!123;UBERON:0000956!5.95e-09!25;UBERON:0000203!5.95e-09!25;UBERON:0000153!9.18e-09!129;UBERON:0007811!9.18e-09!129;UBERON:0003075!1.60e-08!86;UBERON:0007284!1.60e-08!86;UBERON:0002619!4.77e-08!22;UBERON:0003056!6.26e-08!61;UBERON:0001950!3.00e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;4.64e-12;32!UBERON:0002791;4.70e-11;32!UBERON:0003528;6.32e-11;34!UBERON:0002020;6.32e-11;34!UBERON:0001893;1.38e-10;34!UBERON:0000956;8.53e-10;25!UBERON:0000203;8.53e-10;25!UBERON:0002780;2.38e-09;41!UBERON:0001890;2.38e-09;41!UBERON:0002619;7.14e-09;22!UBERON:0001950;4.75e-08;20!UBERON:0000073;1.65e-07;53!UBERON:0002616;1.65e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,6.14e-13,32;UBERON:0000073,3.06e-12,53;UBERON:0002616,3.06e-12,53;UBERON:0002780,3.13e-12,41;UBERON:0001890,3.13e-12,41;UBERON:0003080,3.13e-12,41;UBERON:0006240,3.13e-12,41;UBERON:0001049,4.34e-12,56;UBERON:0005068,4.34e-12,56;UBERON:0006241,4.34e-12,56;UBERON:0007135,4.34e-12,56;UBERON:0001893,1.25e-11,34;UBERON:0003528,1.42e-11,34;UBERON:0002020,1.42e-11,34;UBERON:0002791,1.88e-11,32;UBERON:0001017,2.84e-11,81;UBERON:0000955,3.60e-11,68;UBERON:0006238,3.60e-11,68;UBERON:0001016,6.26e-11,89;UBERON:0004121,9.37e-11,171;UBERON:0000924,9.37e-11,171;UBERON:0006601,9.37e-11,171;UBERON:0010371,4.39e-10,104;UBERON:0002346,5.83e-10,86;UBERON:0000956,1.75e-09,25;UBERON:0000203,1.75e-09,25;UBERON:0003075,1.08e-08,82;UBERON:0007284,1.08e-08,82;UBERON:0002619,1.53e-08,22;UBERON:0003056,1.82e-08,61;UBERON:0001950,1.04e-07,20;UBERON:0011216,1.06e-07,223 | |||
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| ||
|short_description=p3@TMEM131 | |||
}} | }} |
Latest revision as of 03:30, 19 September 2015
Short description: | p3@TMEM131 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM131_5end |
Coexpression cluster: | NA |
Association with transcript: | -261bp_to_ENST00000425805_5end |
EntrezGene: | TMEM131 |
HGNC: | 30366 |
UniProt: | B4DMG2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dendritic cell | 2.00e-07 | 10 |
conventional dendritic cell | 3.75e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 6.14e-13 | 32 |
regional part of nervous system | 3.06e-12 | 53 |
regional part of brain | 3.06e-12 | 53 |
regional part of forebrain | 3.13e-12 | 41 |
forebrain | 3.13e-12 | 41 |
anterior neural tube | 3.13e-12 | 41 |
future forebrain | 3.13e-12 | 41 |
neural tube | 4.34e-12 | 56 |
neural rod | 4.34e-12 | 56 |
future spinal cord | 4.34e-12 | 56 |
neural keel | 4.34e-12 | 56 |
telencephalon | 1.25e-11 | 34 |
brain grey matter | 1.42e-11 | 34 |
gray matter | 1.42e-11 | 34 |
regional part of telencephalon | 1.88e-11 | 32 |
central nervous system | 2.84e-11 | 81 |
brain | 3.60e-11 | 68 |
future brain | 3.60e-11 | 68 |
nervous system | 6.26e-11 | 89 |
ectoderm-derived structure | 9.37e-11 | 171 |
ectoderm | 9.37e-11 | 171 |
presumptive ectoderm | 9.37e-11 | 171 |
ecto-epithelium | 4.39e-10 | 104 |
neurectoderm | 5.83e-10 | 86 |
cerebral cortex | 1.75e-09 | 25 |
pallium | 1.75e-09 | 25 |
neural plate | 1.08e-08 | 82 |
presumptive neural plate | 1.08e-08 | 82 |
regional part of cerebral cortex | 1.53e-08 | 22 |
pre-chordal neural plate | 1.82e-08 | 61 |
neocortex | 1.04e-07 | 20 |
organ system subdivision | 1.06e-07 | 223 |