FFCP PHASE1:Hg19::chr11:6423953..6423960,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=322 | |EntrezGene=322 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=581 | |HGNC=581 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010rad.1_5end | |association_with_transcript=0bp_to_uc010rad.1_5end | ||
|cluster_id=chr11:6423953..6423960,- | |||
|coexpression_cluster_id=C386 | |coexpression_cluster_id=C386 | ||
|description=CAGE_peak_19_at_APBB1_5end | |description=CAGE_peak_19_at_APBB1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000084!9.16e-17!25;CL:0000827!9.16e-17!25;CL:0000791!6.52e-13!18;CL:0000789!6.52e-13!18;CL:0002420!6.52e-13!18;CL:0002419!6.52e-13!18;CL:0000790!6.52e-13!18;CL:0000838!1.16e-10!52;CL:0000542!2.30e-10!53;CL:0000051!2.30e-10!53;CL:0000080!3.74e-08!6;CL:0000842!8.26e-07!3 | |ontology_enrichment_celltype=CL:0000084!9.16e-17!25;CL:0000827!9.16e-17!25;CL:0000791!6.52e-13!18;CL:0000789!6.52e-13!18;CL:0002420!6.52e-13!18;CL:0002419!6.52e-13!18;CL:0000790!6.52e-13!18;CL:0000838!1.16e-10!52;CL:0000542!2.30e-10!53;CL:0000051!2.30e-10!53;CL:0000080!3.74e-08!6;CL:0000842!8.26e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002593;5.96e-34;2!CL:0002595;1.71e-14;5 | |ontology_enrichment_celltype_v019=CL:0002593;5.96e-34;2!CL:0002595;1.71e-14;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,5.04e-34,2;CL:0002595,1.60e-14,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.24e-09;8 | |ontology_enrichment_disease_v019=DOID:1036;1.24e-09;8 | ||
|ontology_enrichment_disease_v019_2=DOID:1036,1.24e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0002370!4.06e-10!4;UBERON:0005058!4.06e-10!4;UBERON:0009113!4.06e-10!4;UBERON:0003295!4.06e-10!4;UBERON:0005562!4.06e-10!4 | |ontology_enrichment_uberon=UBERON:0002370!4.06e-10!4;UBERON:0005058!4.06e-10!4;UBERON:0009113!4.06e-10!4;UBERON:0003295!4.06e-10!4;UBERON:0005562!4.06e-10!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002456;5.96e-34;2!UBERON:0003834;1.71e-14;5!UBERON:0001533;1.71e-14;5!UBERON:0003513;9.43e-11;7 | |ontology_enrichment_uberon_v019=UBERON:0002456;5.96e-34;2!UBERON:0003834;1.71e-14;5!UBERON:0001533;1.71e-14;5!UBERON:0003513;9.43e-11;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,5.04e-34,2;UBERON:0003834,1.60e-14,5;UBERON:0001533,1.60e-14,5;UBERON:0003513,8.99e-11,7 | |||
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| ||
|short_description=p19@APBB1 | |short_description=p19@APBB1 | ||
}} | }} |
Latest revision as of 03:26, 19 September 2015
Short description: | p19@APBB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_APBB1_5end |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | 0bp_to_uc010rad.1_5end |
EntrezGene: | APBB1 |
HGNC: | 581 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 5.04e-34 | 2 |
smooth muscle cell of the subclavian artery | 1.60e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 5.04e-34 | 2 |
thoracic segment blood vessel | 1.60e-14 | 5 |
subclavian artery | 1.60e-14 | 5 |
trunk blood vessel | 8.99e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.24e-09 | 8 |