FFCP PHASE1:Hg19::chr17:2304333..2304364,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4335 | |EntrezGene=4335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7188 | |HGNC=7188 | ||
|TSSclassifier=strong | |||
|UniProt=Q99583 | |UniProt=Q99583 | ||
|association_with_transcript=0bp_to_ENST00000404961_5end | |association_with_transcript=0bp_to_ENST00000404961_5end | ||
|cluster_id=chr17:2304333..2304364,- | |||
|description=CAGE_peak_1_at_MNT_5end | |description=CAGE_peak_1_at_MNT_5end | ||
|id=chr17:2304333..2304364,- | |id=chr17:2304333..2304364,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-17!115;UBERON:0001049!1.48e-10!57;UBERON:0005068!1.48e-10!57;UBERON:0006241!1.48e-10!57;UBERON:0007135!1.48e-10!57;UBERON:0000073!2.65e-10!94;UBERON:0001016!2.65e-10!94;UBERON:0001950!2.78e-10!20;UBERON:0002619!4.85e-10!22;UBERON:0005743!6.51e-10!86;UBERON:0001017!9.01e-10!82;UBERON:0003080!1.06e-09!42;UBERON:0002780!2.02e-09!41;UBERON:0001890!2.02e-09!41;UBERON:0006240!2.02e-09!41;UBERON:0000955!2.93e-09!69;UBERON:0006238!2.93e-09!69;UBERON:0002346!8.20e-09!90;UBERON:0000924!1.14e-08!173;UBERON:0006601!1.14e-08!173;UBERON:0002616!1.17e-08!59;UBERON:0003075!1.51e-08!86;UBERON:0007284!1.51e-08!86;UBERON:0004121!2.21e-08!169;UBERON:0001893!2.80e-08!34;UBERON:0001869!3.18e-08!32;UBERON:0002791!6.19e-08!33;UBERON:0002020!6.75e-08!34;UBERON:0003528!6.75e-08!34;UBERON:0003056!1.45e-07!61;UBERON:0000956!3.22e-07!25;UBERON:0000203!3.22e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;2.98e-10;20!UBERON:0002619;5.67e-10;22!UBERON:0001869;2.11e-07;32!UBERON:0001893;2.58e-07;34!UBERON:0000956;3.06e-07;25!UBERON:0000203;3.06e-07;25!UBERON:0002780;5.61e-07;41!UBERON:0001890;5.61e-07;41!UBERON:0002791;6.23e-07;32!UBERON:0003528;8.11e-07;34!UBERON:0002020;8.11e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.78e-17,114;UBERON:0001950,2.78e-10,20;UBERON:0001049,2.79e-10,56;UBERON:0005068,2.79e-10,56;UBERON:0006241,2.79e-10,56;UBERON:0007135,2.79e-10,56;UBERON:0002619,4.85e-10,22;UBERON:0001016,6.69e-10,89;UBERON:0000073,7.94e-10,53;UBERON:0002616,7.94e-10,53;UBERON:0001017,1.61e-09,81;UBERON:0002780,2.02e-09,41;UBERON:0001890,2.02e-09,41;UBERON:0003080,2.02e-09,41;UBERON:0006240,2.02e-09,41;UBERON:0000955,5.27e-09,68;UBERON:0006238,5.27e-09,68;UBERON:0002346,9.03e-09,86;UBERON:0003075,1.65e-08,82;UBERON:0007284,1.65e-08,82;UBERON:0004121,2.23e-08,171;UBERON:0000924,2.23e-08,171;UBERON:0006601,2.23e-08,171;UBERON:0001893,2.80e-08,34;UBERON:0010371,2.98e-08,104;UBERON:0001869,3.18e-08,32;UBERON:0003528,6.75e-08,34;UBERON:0002020,6.75e-08,34;UBERON:0002791,1.15e-07,32;UBERON:0003056,1.78e-07,61;UBERON:0000956,3.22e-07,25;UBERON:0000203,3.22e-07,25 | |||
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| ||
|short_description=p1@MNT | |short_description=p1@MNT | ||
}} | }} |
Latest revision as of 03:18, 19 September 2015
Short description: | p1@MNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MNT_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000404961_5end |
EntrezGene: | MNT |
HGNC: | 7188 |
UniProt: | Q99583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.78e-17 | 114 |
neocortex | 2.78e-10 | 20 |
neural tube | 2.79e-10 | 56 |
neural rod | 2.79e-10 | 56 |
future spinal cord | 2.79e-10 | 56 |
neural keel | 2.79e-10 | 56 |
regional part of cerebral cortex | 4.85e-10 | 22 |
nervous system | 6.69e-10 | 89 |
regional part of nervous system | 7.94e-10 | 53 |
regional part of brain | 7.94e-10 | 53 |
central nervous system | 1.61e-09 | 81 |
regional part of forebrain | 2.02e-09 | 41 |
forebrain | 2.02e-09 | 41 |
anterior neural tube | 2.02e-09 | 41 |
future forebrain | 2.02e-09 | 41 |
brain | 5.27e-09 | 68 |
future brain | 5.27e-09 | 68 |
neurectoderm | 9.03e-09 | 86 |
neural plate | 1.65e-08 | 82 |
presumptive neural plate | 1.65e-08 | 82 |
ectoderm-derived structure | 2.23e-08 | 171 |
ectoderm | 2.23e-08 | 171 |
presumptive ectoderm | 2.23e-08 | 171 |
telencephalon | 2.80e-08 | 34 |
ecto-epithelium | 2.98e-08 | 104 |
cerebral hemisphere | 3.18e-08 | 32 |
brain grey matter | 6.75e-08 | 34 |
gray matter | 6.75e-08 | 34 |
regional part of telencephalon | 1.15e-07 | 32 |
pre-chordal neural plate | 1.78e-07 | 61 |
cerebral cortex | 3.22e-07 | 25 |
pallium | 3.22e-07 | 25 |