FFCP PHASE1:Hg19::chr2:191272706..191272728,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54842 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24711 | |||
|TSSclassifier=strong | |||
|UniProt=Q6ZSS7,C9JAZ7,C9J134 | |||
|association_with_transcript=-352bp_to_ENST00000392328,ENST00000417958,ENST00000432036,NM_017694,uc002urz.2_5end | |||
|cluster_id=chr2:191272706..191272728,+ | |||
|description=CAGE_peak_5_at_MFSD6_5end | |||
|id=chr2:191272706..191272728,+ | |||
|ontology_enrichment_celltype=CL:0000838!4.36e-19!52;CL:0000542!3.32e-18!53;CL:0000051!3.32e-18!53;CL:0000084!1.48e-13!25;CL:0000827!1.48e-13!25;CL:0000791!2.30e-13!18;CL:0000789!2.30e-13!18;CL:0002420!2.30e-13!18;CL:0002419!2.30e-13!18;CL:0000790!2.30e-13!18;CL:0000738!1.51e-10!140;CL:0002031!2.76e-10!124;CL:0002087!3.79e-09!119;CL:0000625!5.35e-09!11;CL:0000037!5.02e-08!172;CL:0000566!5.02e-08!172;CL:0002032!6.32e-07!165;CL:0000837!6.32e-07!165;CL:0000988!7.30e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.63e-21;18!CL:0000789;1.63e-21;18!CL:0002419;1.63e-21;18!CL:0000084;1.34e-18;25!CL:0000625;3.09e-14;11!CL:0000542;6.92e-13;53!CL:0000236;6.26e-09;13!CL:0000624;1.68e-08;6!CL:0000097;4.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.15e-21,18;CL:0000789,1.15e-21,18;CL:0002420,1.15e-21,18;CL:0002419,1.15e-21,18;CL:0000790,1.15e-21,18;CL:0000838,1.29e-21,52;CL:0000542,5.93e-21,53;CL:0000051,5.93e-21,53;CL:0000084,1.14e-18,25;CL:0000827,1.14e-18,25;CL:0000625,3.19e-14,11;CL:0000738,3.15e-10,136;CL:0002031,3.10e-09,120;CL:0002087,1.71e-08,115;CL:0000624,1.74e-08,6;CL:0000236,2.49e-08,14;CL:0000037,2.53e-07,168;CL:0000097,4.40e-07,5;CL:0002028,4.40e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;1.63e-21;18!CL:0000051;6.92e-13;53!UBERON:0006601;1.89e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.59e-27!115;UBERON:0000073!8.55e-20!94;UBERON:0001016!8.55e-20!94;UBERON:0001017!2.42e-19!82;UBERON:0005743!2.95e-19!86;UBERON:0001049!4.83e-19!57;UBERON:0005068!4.83e-19!57;UBERON:0006241!4.83e-19!57;UBERON:0007135!4.83e-19!57;UBERON:0002780!3.01e-17!41;UBERON:0001890!3.01e-17!41;UBERON:0006240!3.01e-17!41;UBERON:0003080!2.62e-16!42;UBERON:0000955!7.82e-16!69;UBERON:0006238!7.82e-16!69;UBERON:0002616!9.81e-15!59;UBERON:0001893!1.11e-14!34;UBERON:0002020!2.61e-14!34;UBERON:0003528!2.61e-14!34;UBERON:0002791!4.72e-14!33;UBERON:0001869!1.10e-13!32;UBERON:0002346!4.20e-12!90;UBERON:0003075!6.21e-12!86;UBERON:0007284!6.21e-12!86;UBERON:0000153!1.56e-11!129;UBERON:0007811!1.56e-11!129;UBERON:0000924!2.93e-11!173;UBERON:0006601!2.93e-11!173;UBERON:0004121!5.30e-11!169;UBERON:0002619!7.08e-11!22;UBERON:0000956!7.43e-11!25;UBERON:0000203!7.43e-11!25;UBERON:0001950!6.08e-10!20;UBERON:0000033!9.24e-10!123;UBERON:0003056!1.43e-09!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.62e-16;22!UBERON:0001893;6.27e-16;34!UBERON:0002780;6.53e-16;41!UBERON:0001890;6.53e-16;41!UBERON:0001869;4.52e-15;32!UBERON:0003528;4.74e-15;34!UBERON:0002020;4.74e-15;34!UBERON:0002791;1.08e-14;32!UBERON:0001950;1.20e-14;20!UBERON:0000073;3.29e-14;53!UBERON:0002616;3.29e-14;53!UBERON:0000956;1.70e-13;25!UBERON:0000203;1.70e-13;25!UBERON:0001017;5.50e-10;75!UBERON:0000955;2.31e-09;68!UBERON:0001016;7.52e-09;83!UBERON:0000178;1.63e-08;15!UBERON:0000179;1.63e-08;15!UBERON:0000463;1.63e-08;15!UBERON:0007023;1.72e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.99e-29,114;UBERON:0001049,3.85e-27,56;UBERON:0005068,3.85e-27,56;UBERON:0006241,3.85e-27,56;UBERON:0007135,3.85e-27,56;UBERON:0000073,3.42e-25,53;UBERON:0002616,3.42e-25,53;UBERON:0001017,4.44e-25,81;UBERON:0001016,5.02e-24,89;UBERON:0002780,1.89e-22,41;UBERON:0001890,1.89e-22,41;UBERON:0003080,1.89e-22,41;UBERON:0006240,1.89e-22,41;UBERON:0000955,5.37e-22,68;UBERON:0006238,5.37e-22,68;UBERON:0001893,3.10e-19,34;UBERON:0003528,1.13e-18,34;UBERON:0002020,1.13e-18,34;UBERON:0001869,1.31e-17,32;UBERON:0002791,3.07e-17,32;UBERON:0002619,9.39e-17,22;UBERON:0003075,1.30e-16,82;UBERON:0007284,1.30e-16,82;UBERON:0002346,4.63e-16,86;UBERON:0001950,3.61e-15,20;UBERON:0000956,5.36e-14,25;UBERON:0000203,5.36e-14,25;UBERON:0003056,1.74e-13,61;UBERON:0010371,3.30e-12,104;UBERON:0004121,4.83e-10,171;UBERON:0000924,4.83e-10,171;UBERON:0006601,4.83e-10,171;UBERON:0011216,4.46e-09,223;UBERON:0000178,1.98e-08,15;UBERON:0000179,1.98e-08,15;UBERON:0000463,1.98e-08,15;UBERON:0010314,1.71e-07,132 | |||
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| |||
|short_description=p5@MFSD6 | |||
}} |
Latest revision as of 03:14, 19 September 2015
Short description: | p5@MFSD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MFSD6_5end |
Coexpression cluster: | NA |
Association with transcript: | -352bp_to_ENST00000392328, ENST00000417958, ENST00000432036, NM_017694, uc002urz.2_5end |
EntrezGene: | MFSD6 |
HGNC: | 24711 |
UniProt: | Q6ZSS7C9JAZ7C9J134 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.15e-21 | 18 |
alpha-beta T cell | 1.15e-21 | 18 |
immature T cell | 1.15e-21 | 18 |
mature T cell | 1.15e-21 | 18 |
immature alpha-beta T cell | 1.15e-21 | 18 |
lymphoid lineage restricted progenitor cell | 1.29e-21 | 52 |
lymphocyte | 5.93e-21 | 53 |
common lymphoid progenitor | 5.93e-21 | 53 |
T cell | 1.14e-18 | 25 |
pro-T cell | 1.14e-18 | 25 |
CD8-positive, alpha-beta T cell | 3.19e-14 | 11 |
leukocyte | 3.15e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 3.10e-09 | 120 |
nongranular leukocyte | 1.71e-08 | 115 |
CD4-positive, alpha-beta T cell | 1.74e-08 | 6 |
B cell | 2.49e-08 | 14 |
hematopoietic stem cell | 2.53e-07 | 168 |
mast cell | 4.40e-07 | 5 |
basophil mast progenitor cell | 4.40e-07 | 5 |