FFCP PHASE1:Hg19::chr11:64110209..64110220,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283234 | |EntrezGene=283234 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26757 | |HGNC=26757 | ||
|TSSclassifier=strong | |||
|UniProt=A6NC98 | |UniProt=A6NC98 | ||
|association_with_transcript=6bp_to_ENST00000494566,uc001nzz.1_5end | |||
|cluster_id=chr11:64110209..64110220,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_CCDC88B_5end | |||
|id=chr11:64110209..64110220,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.48e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;5.69e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.66e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.46e-34!57;UBERON:0005068!4.46e-34!57;UBERON:0006241!4.46e-34!57;UBERON:0007135!4.46e-34!57;UBERON:0002616!1.60e-28!59;UBERON:0007023!9.83e-28!115;UBERON:0003075!1.14e-27!86;UBERON:0007284!1.14e-27!86;UBERON:0002346!6.93e-26!90;UBERON:0000955!2.01e-25!69;UBERON:0006238!2.01e-25!69;UBERON:0002780!3.57e-24!41;UBERON:0001890!3.57e-24!41;UBERON:0006240!3.57e-24!41;UBERON:0001017!4.05e-24!82;UBERON:0005743!5.02e-24!86;UBERON:0003080!2.01e-23!42;UBERON:0000073!2.58e-23!94;UBERON:0001016!2.58e-23!94;UBERON:0001893!5.06e-23!34;UBERON:0002020!6.01e-23!34;UBERON:0003528!6.01e-23!34;UBERON:0002791!8.29e-22!33;UBERON:0000033!1.46e-20!123;UBERON:0001869!2.47e-20!32;UBERON:0000153!5.33e-19!129;UBERON:0007811!5.33e-19!129;UBERON:0003056!5.92e-18!61;UBERON:0004121!2.67e-16!169;UBERON:0000924!1.34e-15!173;UBERON:0006601!1.34e-15!173;UBERON:0002619!2.64e-15!22;UBERON:0001950!1.23e-14!20;UBERON:0000956!4.64e-13!25;UBERON:0000203!4.64e-13!25;UBERON:0002308!1.23e-12!9;UBERON:0000125!1.23e-12!9;UBERON:0003076!8.53e-12!15;UBERON:0003057!8.53e-12!15;UBERON:0002420!4.23e-10!9;UBERON:0007245!4.23e-10!9;UBERON:0010009!4.23e-10!9;UBERON:0010011!4.23e-10!9;UBERON:0000454!4.23e-10!9;UBERON:0004733!5.73e-10!12;UBERON:0002028!5.73e-10!12;UBERON:0007277!5.73e-10!12;UBERON:0009663!1.01e-09!7;UBERON:0004732!4.57e-09!13;UBERON:0001871!1.31e-08!7;UBERON:0000369!1.67e-08!4;UBERON:0002435!1.67e-08!4;UBERON:0000204!1.67e-08!4;UBERON:0010082!1.67e-08!4;UBERON:0004111!2.51e-08!241;UBERON:0002298!3.28e-08!8;UBERON:0000481!7.65e-08!347;UBERON:0002680!8.55e-08!9;UBERON:0001895!8.55e-08!9;UBERON:0010092!8.55e-08!9;UBERON:0000064!8.80e-08!219;UBERON:0000200!1.10e-07!6;UBERON:0000475!1.24e-07!365;UBERON:0000025!1.42e-07!194;UBERON:0005383!1.88e-07!3;UBERON:0005382!1.88e-07!3;UBERON:0000062!6.99e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.96e-60;6!UBERON:0002680;3.32e-40;9!UBERON:0001895;3.32e-40;9!UBERON:0004733;2.00e-30;12!UBERON:0002028;2.00e-30;12!UBERON:0004732;3.65e-28;13!UBERON:0002021;3.22e-09;5!UBERON:0000073;4.42e-08;53!UBERON:0002616;4.42e-08;53!UBERON:0001017;6.89e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-59,6;UBERON:0006215,1.22e-59,6;UBERON:0002680,3.80e-40,9;UBERON:0001895,3.80e-40,9;UBERON:0010092,3.80e-40,9;UBERON:0004733,2.22e-30,12;UBERON:0002028,2.22e-30,12;UBERON:0007277,2.22e-30,12;UBERON:0004732,4.00e-28,13;UBERON:0003076,1.65e-24,15;UBERON:0003057,1.65e-24,15;UBERON:0000073,2.04e-12,53;UBERON:0002616,2.04e-12,53;UBERON:0001049,8.46e-12,56;UBERON:0005068,8.46e-12,56;UBERON:0006241,8.46e-12,56;UBERON:0007135,8.46e-12,56;UBERON:0000955,9.88e-10,68;UBERON:0006238,9.88e-10,68;UBERON:0002021,3.22e-09,5;UBERON:0001017,2.64e-08,81;UBERON:0003075,2.64e-08,82;UBERON:0007284,2.64e-08,82;UBERON:0002346,5.98e-08,86;UBERON:0001016,1.50e-07,89 | |||
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| ||
|short_description=p7@CCDC88B | |||
}} | }} |
Latest revision as of 03:11, 19 September 2015
Short description: | p7@CCDC88B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CCDC88B_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 6bp_to_ENST00000494566, uc001nzz.1_5end |
EntrezGene: | CCDC88B |
HGNC: | 26757 |
UniProt: | A6NC98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-59 | 6 |
rhombic lip | 1.22e-59 | 6 |
regional part of metencephalon | 3.80e-40 | 9 |
metencephalon | 3.80e-40 | 9 |
future metencephalon | 3.80e-40 | 9 |
segmental subdivision of hindbrain | 2.22e-30 | 12 |
hindbrain | 2.22e-30 | 12 |
presumptive hindbrain | 2.22e-30 | 12 |
segmental subdivision of nervous system | 4.00e-28 | 13 |
posterior neural tube | 1.65e-24 | 15 |
chordal neural plate | 1.65e-24 | 15 |
regional part of nervous system | 2.04e-12 | 53 |
regional part of brain | 2.04e-12 | 53 |
neural tube | 8.46e-12 | 56 |
neural rod | 8.46e-12 | 56 |
future spinal cord | 8.46e-12 | 56 |
neural keel | 8.46e-12 | 56 |
brain | 9.88e-10 | 68 |
future brain | 9.88e-10 | 68 |
occipital lobe | 3.22e-09 | 5 |
central nervous system | 2.64e-08 | 81 |
neural plate | 2.64e-08 | 82 |
presumptive neural plate | 2.64e-08 | 82 |
neurectoderm | 5.98e-08 | 86 |
nervous system | 1.50e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.66e-21 | 2 |