FFCP PHASE1:Hg19::chr2:98329858..98329869,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7535 | |EntrezGene=7535 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12858 | |HGNC=12858 | ||
|TSSclassifier=strong | |||
|UniProt=P43403 | |UniProt=P43403 | ||
|association_with_transcript=-153bp_to_ENST00000264972_5end | |association_with_transcript=-153bp_to_ENST00000264972_5end | ||
|cluster_id=chr2:98329858..98329869,+ | |||
|coexpression_cluster_id=C100 | |coexpression_cluster_id=C100 | ||
|description=CAGE_peak_7_at_ZAP70_5end | |description=CAGE_peak_7_at_ZAP70_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000084!1.07e-57!25;CL:0000827!1.07e-57!25;CL:0000791!6.73e-37!18;CL:0000789!6.73e-37!18;CL:0002420!6.73e-37!18;CL:0002419!6.73e-37!18;CL:0000790!6.73e-37!18;CL:0000838!1.36e-35!52;CL:0000542!8.71e-35!53;CL:0000051!8.71e-35!53;CL:0000624!1.11e-18!6;CL:0000625!1.04e-17!11;CL:0000738!3.06e-15!140;CL:0002087!3.80e-15!119;CL:0000037!5.42e-15!172;CL:0000566!5.42e-15!172;CL:0000988!1.09e-13!182;CL:0002031!4.54e-13!124;CL:0002032!1.07e-12!165;CL:0000837!1.07e-12!165;CL:0000898!1.07e-10!3;CL:0000623!1.64e-10!3;CL:0000825!1.64e-10!3;CL:0000815!6.40e-08!2;CL:0000792!6.40e-08!2;CL:0002677!6.40e-08!2;CL:0000893!1.46e-07!2;CL:0002489!1.46e-07!2;CL:0000809!1.46e-07!2;CL:0000808!1.46e-07!2;CL:0000894!1.46e-07!2;CL:0000806!1.46e-07!2;CL:0000807!1.46e-07!2;CL:0000805!1.46e-07!2;CL:0002425!1.46e-07!2 | |ontology_enrichment_celltype=CL:0000084!1.07e-57!25;CL:0000827!1.07e-57!25;CL:0000791!6.73e-37!18;CL:0000789!6.73e-37!18;CL:0002420!6.73e-37!18;CL:0002419!6.73e-37!18;CL:0000790!6.73e-37!18;CL:0000838!1.36e-35!52;CL:0000542!8.71e-35!53;CL:0000051!8.71e-35!53;CL:0000624!1.11e-18!6;CL:0000625!1.04e-17!11;CL:0000738!3.06e-15!140;CL:0002087!3.80e-15!119;CL:0000037!5.42e-15!172;CL:0000566!5.42e-15!172;CL:0000988!1.09e-13!182;CL:0002031!4.54e-13!124;CL:0002032!1.07e-12!165;CL:0000837!1.07e-12!165;CL:0000898!1.07e-10!3;CL:0000623!1.64e-10!3;CL:0000825!1.64e-10!3;CL:0000815!6.40e-08!2;CL:0000792!6.40e-08!2;CL:0002677!6.40e-08!2;CL:0000893!1.46e-07!2;CL:0002489!1.46e-07!2;CL:0000809!1.46e-07!2;CL:0000808!1.46e-07!2;CL:0000894!1.46e-07!2;CL:0000806!1.46e-07!2;CL:0000807!1.46e-07!2;CL:0000805!1.46e-07!2;CL:0002425!1.46e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.61e-27;25!CL:0002127;2.32e-12;1!CL:0000911;2.32e-12;1!CL:0000814;2.32e-12;1!CL:0000542;1.25e-10;53!CL:0000791;4.96e-10;18!CL:0000789;4.96e-10;18!CL:0002419;4.96e-10;18!CL:0000815;8.28e-07;2!CL:0000792;8.28e-07;2!CL:0002677;8.28e-07;2 | |ontology_enrichment_celltype_v019=CL:0000084;2.61e-27;25!CL:0002127;2.32e-12;1!CL:0000911;2.32e-12;1!CL:0000814;2.32e-12;1!CL:0000542;1.25e-10;53!CL:0000791;4.96e-10;18!CL:0000789;4.96e-10;18!CL:0002419;4.96e-10;18!CL:0000815;8.28e-07;2!CL:0000792;8.28e-07;2!CL:0002677;8.28e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.21e-27,25;CL:0000827,4.21e-27,25;CL:0000838,6.60e-16,52;CL:0000542,1.38e-15,53;CL:0000051,1.38e-15,53;CL:0002127,3.85e-12,1;CL:0000914,3.85e-12,1;CL:0000911,3.85e-12,1;CL:0000814,3.85e-12,1;CL:0002042,3.85e-12,1;CL:0002039,3.85e-12,1;CL:0002040,3.85e-12,1;CL:0002041,3.85e-12,1;CL:0000791,5.87e-10,18;CL:0000789,5.87e-10,18;CL:0002420,5.87e-10,18;CL:0002419,5.87e-10,18;CL:0000790,5.87e-10,18;CL:0000815,6.80e-07,2;CL:0000792,6.80e-07,2;CL:0002677,6.80e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.25e-10;53!CL:0000790;4.96e-10;18!CL:0002425;8.28e-07;2 | |ontology_enrichment_development_v019=CL:0000051;1.25e-10;53!CL:0000790;4.96e-10;18!CL:0002425;8.28e-07;2 | ||
|ontology_enrichment_disease=DOID:2531!6.03e-08!51;DOID:0060083!6.03e-08!51 | |ontology_enrichment_disease=DOID:2531!6.03e-08!51;DOID:0060083!6.03e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.32e-12;1!DOID:0060061;2.32e-12;1!DOID:8691;2.32e-12;1!DOID:0060058;1.28e-10;10 | |ontology_enrichment_disease_v019=DOID:0060060;2.32e-12;1!DOID:0060061;2.32e-12;1!DOID:8691;2.32e-12;1!DOID:0060058;1.28e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.20e-12,1;DOID:0060061,2.20e-12,1;DOID:8691,2.20e-12,1;DOID:0060058,1.24e-10,10;DOID:2531,2.24e-07,51;DOID:0060083,2.24e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.39e-12!4;UBERON:0005058!1.39e-12!4;UBERON:0009113!1.39e-12!4;UBERON:0003295!1.39e-12!4;UBERON:0005562!1.39e-12!4;UBERON:0003351!2.08e-08!6;UBERON:0004177!3.27e-07!7 | |ontology_enrichment_uberon=UBERON:0002370!1.39e-12!4;UBERON:0005058!1.39e-12!4;UBERON:0009113!1.39e-12!4;UBERON:0003295!1.39e-12!4;UBERON:0005562!1.39e-12!4;UBERON:0003351!2.08e-08!6;UBERON:0004177!3.27e-07!7 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0.651844533267181,0,0,2.33961959458865,1.47302953737419,0.443067789167242,0.541607727530031,1.92136979588513,0.910415432919148,0.657751618414705,1.65810010671509,1.44901542867526,0.593146252648242,0.535081656179426,0,1.47302145506836,0.383220493601921,0.34362744548263,0.506039384039006,1.27426165729639,0.651083453856419,0,0.301150238155546,0.639933055772092,1.24930726552346,0,0.821127996921047,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.591092280605782,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,1.58625035258854,0,0,0,0,0.432807638929335,0.142283686696828,0.637705090915289,0.997896857164083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,2.67464122265948,0,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,5.46334699230189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4072715192173,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0.651844533267181,0,0,2.33961959458865,1.47302953737419,0.443067789167242,0.541607727530031,1.92136979588513,0.910415432919148,0.657751618414705,1.65810010671509,1.44901542867526,0.593146252648242,0.535081656179426,0,1.47302145506836,0.383220493601921,0.34362744548263,0.506039384039006,1.27426165729639,0.651083453856419,0,0.301150238155546,0.639933055772092,1.24930726552346,0,0.821127996921047,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.591092280605782,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,1.58625035258854,0,0,0,0,0.432807638929335,0.142283686696828,0.637705090915289,0.997896857164083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,2.67464122265948,0,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39991177098451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,5.46334699230189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4072715192173,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@ZAP70 | |short_description=p7@ZAP70 | ||
}} | }} |
Latest revision as of 03:11, 19 September 2015
Short description: | p7@ZAP70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_ZAP70_5end |
Coexpression cluster: | C100_rhabdomyosarcoma_gastric_pineal_Wilms_cervical_mesodermal_endometrial |
Association with transcript: | -153bp_to_ENST00000264972_5end |
EntrezGene: | ZAP70 |
HGNC: | 12858 |
UniProt: | P43403 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.21e-27 | 25 |
pro-T cell | 4.21e-27 | 25 |
lymphoid lineage restricted progenitor cell | 6.60e-16 | 52 |
lymphocyte | 1.38e-15 | 53 |
common lymphoid progenitor | 1.38e-15 | 53 |
innate effector T cell | 3.85e-12 | 1 |
immature NK T cell | 3.85e-12 | 1 |
effector T cell | 3.85e-12 | 1 |
mature NK T cell | 3.85e-12 | 1 |
immature NK T cell stage IV | 3.85e-12 | 1 |
immature NK T cell stage I | 3.85e-12 | 1 |
immature NK T cell stage II | 3.85e-12 | 1 |
immature NK T cell stage III | 3.85e-12 | 1 |
mature alpha-beta T cell | 5.87e-10 | 18 |
alpha-beta T cell | 5.87e-10 | 18 |
immature T cell | 5.87e-10 | 18 |
mature T cell | 5.87e-10 | 18 |
immature alpha-beta T cell | 5.87e-10 | 18 |
regulatory T cell | 6.80e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.80e-07 | 2 |
naive regulatory T cell | 6.80e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.20e-12 | 1 |
cutaneous T cell lymphoma | 2.20e-12 | 1 |
mycosis fungoides | 2.20e-12 | 1 |
lymphoma | 1.24e-10 | 10 |
hematologic cancer | 2.24e-07 | 51 |
immune system cancer | 2.24e-07 | 51 |