FFCP PHASE1:Hg19::chr12:53835733..53835743,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54458 | |EntrezGene=54458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24528 | |HGNC=24528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_ENST00000551365_5end | |association_with_transcript=154bp_to_ENST00000551365_5end | ||
|cluster_id=chr12:53835733..53835743,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_8_at_PRR13_5end | |description=CAGE_peak_8_at_PRR13_5end | ||
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|ontology_enrichment_celltype=CL:0000763!2.91e-41!112;CL:0000049!2.91e-41!112;CL:0002057!8.26e-37!42;CL:0000766!1.53e-35!76;CL:0002009!3.94e-35!65;CL:0000557!8.74e-35!71;CL:0000860!5.05e-34!45;CL:0000037!1.55e-33!172;CL:0000566!1.55e-33!172;CL:0002194!1.61e-33!63;CL:0000576!1.61e-33!63;CL:0000040!1.61e-33!63;CL:0000559!1.61e-33!63;CL:0000839!2.41e-32!70;CL:0002032!1.98e-31!165;CL:0000837!1.98e-31!165;CL:0000988!2.51e-30!182;CL:0000738!1.24e-26!140;CL:0002087!1.09e-22!119;CL:0002031!4.96e-22!124;CL:0002320!5.28e-19!365;CL:0000134!2.04e-18!358;CL:0000034!3.35e-16!444;CL:0000048!6.39e-15!430;CL:0000219!8.11e-15!390;CL:0000723!1.29e-14!436;CL:0002393!5.16e-08!9;CL:0002397!5.16e-08!9 | |ontology_enrichment_celltype=CL:0000763!2.91e-41!112;CL:0000049!2.91e-41!112;CL:0002057!8.26e-37!42;CL:0000766!1.53e-35!76;CL:0002009!3.94e-35!65;CL:0000557!8.74e-35!71;CL:0000860!5.05e-34!45;CL:0000037!1.55e-33!172;CL:0000566!1.55e-33!172;CL:0002194!1.61e-33!63;CL:0000576!1.61e-33!63;CL:0000040!1.61e-33!63;CL:0000559!1.61e-33!63;CL:0000839!2.41e-32!70;CL:0002032!1.98e-31!165;CL:0000837!1.98e-31!165;CL:0000988!2.51e-30!182;CL:0000738!1.24e-26!140;CL:0002087!1.09e-22!119;CL:0002031!4.96e-22!124;CL:0002320!5.28e-19!365;CL:0000134!2.04e-18!358;CL:0000034!3.35e-16!444;CL:0000048!6.39e-15!430;CL:0000219!8.11e-15!390;CL:0000723!1.29e-14!436;CL:0002393!5.16e-08!9;CL:0002397!5.16e-08!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.40e-77;33!CL:0002057;8.40e-77;33!CL:0000576;1.66e-53;48!CL:0000473;6.94e-53;39!CL:0000234;6.94e-53;39!CL:0000766;1.78e-34;69!CL:0000763;1.32e-24;100!CL:0002087;7.42e-12;104!CL:0000738;7.54e-10;136!CL:0000988;5.78e-09;177!CL:0000094;5.20e-08;8!CL:0000081;6.42e-08;11!CL:0002393;1.93e-07;6!CL:0002397;1.93e-07;6 | |ontology_enrichment_celltype_v019=CL:0000860;8.40e-77;33!CL:0002057;8.40e-77;33!CL:0000576;1.66e-53;48!CL:0000473;6.94e-53;39!CL:0000234;6.94e-53;39!CL:0000766;1.78e-34;69!CL:0000763;1.32e-24;100!CL:0002087;7.42e-12;104!CL:0000738;7.54e-10;136!CL:0000988;5.78e-09;177!CL:0000094;5.20e-08;8!CL:0000081;6.42e-08;11!CL:0002393;1.93e-07;6!CL:0002397;1.93e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.55e-91,42;CL:0002057,2.55e-91,42;CL:0000473,1.79e-78,48;CL:0000234,1.79e-78,48;CL:0000763,2.28e-76,108;CL:0000049,2.28e-76,108;CL:0002009,1.62e-75,61;CL:0000766,4.78e-72,72;CL:0002194,4.79e-71,59;CL:0000576,4.79e-71,59;CL:0000040,4.79e-71,59;CL:0000559,4.79e-71,59;CL:0000557,9.50e-68,67;CL:0000839,2.31e-62,66;CL:0000037,1.89e-47,168;CL:0002032,2.03e-46,161;CL:0000837,2.03e-46,161;CL:0000988,5.85e-46,177;CL:0000738,2.07e-37,136;CL:0002031,1.14e-32,120;CL:0002087,1.20e-32,115;CL:0000134,1.04e-18,354;CL:0002320,4.85e-18,361;CL:0000219,1.10e-15,386;CL:0000034,7.38e-15,441;CL:0000048,1.54e-13,427;CL:0000723,3.93e-13,433;CL:0002393,7.85e-10,9;CL:0002397,7.85e-10,9;CL:0000094,3.74e-08,8;CL:0000081,5.47e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.47e-64;42!CL:0000049;8.74e-23;108 | |ontology_enrichment_development_v019=CL:0002057;2.47e-64;42!CL:0000049;8.74e-23;108 | ||
|ontology_enrichment_disease=DOID:8692!2.56e-09!31;DOID:2531!6.93e-09!51;DOID:0060083!6.93e-09!51;DOID:1240!1.34e-07!39 | |ontology_enrichment_disease=DOID:8692!2.56e-09!31;DOID:2531!6.93e-09!51;DOID:0060083!6.93e-09!51;DOID:1240!1.34e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.83e-12;31!DOID:1240;5.71e-08;39 | |ontology_enrichment_disease_v019=DOID:8692;1.83e-12;31!DOID:1240;5.71e-08;39 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,4.64e-13,31;DOID:1240,1.04e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.56e-35!102;UBERON:0003061!8.56e-35!102;UBERON:0002193!5.32e-34!112;UBERON:0002371!1.73e-30!80;UBERON:0001474!1.29e-27!86;UBERON:0004765!4.81e-25!101;UBERON:0001434!4.81e-25!101;UBERON:0002405!4.39e-24!115;UBERON:0002384!1.26e-17!375;UBERON:0002204!5.86e-14!167;UBERON:0003081!1.20e-11!216 | |ontology_enrichment_uberon=UBERON:0002390!8.56e-35!102;UBERON:0003061!8.56e-35!102;UBERON:0002193!5.32e-34!112;UBERON:0002371!1.73e-30!80;UBERON:0001474!1.29e-27!86;UBERON:0004765!4.81e-25!101;UBERON:0001434!4.81e-25!101;UBERON:0002405!4.39e-24!115;UBERON:0002384!1.26e-17!375;UBERON:0002204!5.86e-14!167;UBERON:0003081!1.20e-11!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.22e-61,76;UBERON:0002390,3.53e-59,98;UBERON:0003061,3.53e-59,98;UBERON:0001474,5.00e-56,82;UBERON:0002193,1.73e-52,108;UBERON:0004765,5.42e-50,90;UBERON:0002405,5.39e-48,93;UBERON:0001434,8.48e-44,100;UBERON:0003081,4.69e-24,203;UBERON:0002204,1.19e-22,167;UBERON:0002384,3.96e-17,371;UBERON:0000926,3.11e-12,315;UBERON:0004120,3.11e-12,315;UBERON:0006603,3.11e-12,315 | |||
|phase1_expression=0.363356758541113,0,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.331397375727916,0,0.602694528023977,0,0,0.246242116153576,0,0,0,0,0,0,0.0821005894499457,0,1.57345710739562,0,1.39334510984468,0,0,0,0.542270404062111,0.142169232487422,2.34880351467878,3.32397245119126,2.20598892217156,0.651032612147555,0,0.647787332037959,0.515151135268373,3.19876125315042,6.42389104270976,3.63876091781724,3.71886459049095,1.23350366406548,2.47765096716083,1.7261543539329,4.86705342405291,3.78371567821736,4.82643953031266,2.5819387343353,1.35426486594342,2.44715041405386,2.72906150057846,2.47195832889593,5.20342617030534,3.85114832491312,3.83602275479425,2.30895910130701,3.78980949481101,1.70489900213078,2.61188314765726,2.26954089876456,4.35975574296902,3.01498398308092,4.17186334736161,3.9093992046921,1.21079900526674,3.68277635987565,1.58231193720442,2.5350634357433,1.06302149982522,0.838634582033504,2.58355851636939,3.75442232103766,2.4108838004562,1.14005097496499,0.59675003159727,1.64397738388171,0,0.546138611262131,0,0,0.800791974072025,0,0,0,0,0.587237189370939,0,2.64342657158052,1.68152568894461,1.05353633910031,0,0,0.205601498999509,0.167186495390678,0,0.946895611469467,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,0,0,0,0,0,0,0,0.696518949197069,0.664789802594326,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0.24406205754817,0,0,0,0.22452937262617,0.225222960966644,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0,0,0.354668382198357,0,0,0.24666754841716,0,0.134710672069688,0,0.302714855289863,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.226864366320042,0,0.213557388818567,0,0.300091096084402,0.412210116953756,0,0,0,0.194874010322397,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0,0,0.10366105501537,0.252320850875628,0,1.56449532329816,0.643240938192885,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,1.03993478527958,0,0,0,0.144366447761074,0.925971025153221,0.380508304469197,0,0,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,0,0,0,0.492663237895943,0.264145302039678,0,0.288239906833923,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0.112131084345361,0,0.22001485746285,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0,1.62786481617433,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0,1.14861935834114,1.42636905040718,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,4.55857064779639,0.36807447515742,0,0.271265023699736,0,0,0.473107245101804,0,0.902838299183157,0,0,0,0,0,0,0,1.03384013061444,0.647142602455851,0.640365346820666,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0,0,0,0,0.116210378459959,0,0,0.276242966807689,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0.10115778085555,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0.38126038784765,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0.487426979262569,0,0,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0,0,0,0,1.01489521846434,3.0585488285695,1.70894156152249,0.476463550915578,1.23408681925858,1.29694662238543,0.540031437238115,0.79312517629427,0.106824071127473,0,0,0.371606350251437,0.144269212976445,0.0711418433484141,0,0,1.91505370132367,1.2700414963433,3.89546328329467,2.24637742490767,0.456469358066384,2.19351854082233,2.50634477090067,0.338583555603207,1.1241165257259,0.80719882876419,1.27753871307098,1.03051603426729,2.45792611446766,1.3420566473545,2.66958626739054,1.9538809540204,0.278406173895242,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0.0898683511473268,0,2.04628948090749,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0.113942055847001,0.23056390438806,0,0,0,0,0,0,0.941881538370149,0.332423363800313,0.225595660617181,0.19606253431774,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0,0.547364367646998,0,0,0,1.20990716048664,0,0.63186579628488,0,0,0,0,0.313932918407225,0,0.284609546029793,0,0,0,0,0,0,0,0.0730893170861856,0,0.0969890164884194,0.441280633457501,0,0,0.596143835108969,0.0633107959558787,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.446342914883745,0.134366944973453,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0,0.169346664131569,0,0,0,0,0,1.574817240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| ||
|short_description=p8@PRR13 | |short_description=p8@PRR13 | ||
}} | }} |
Latest revision as of 03:10, 19 September 2015
Short description: | p8@PRR13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PRR13_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 154bp_to_ENST00000551365_5end |
EntrezGene: | PRR13 |
HGNC: | 24528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.22e-61 | 76 |
hematopoietic system | 3.53e-59 | 98 |
blood island | 3.53e-59 | 98 |
bone element | 5.00e-56 | 82 |
hemolymphoid system | 1.73e-52 | 108 |
skeletal element | 5.42e-50 | 90 |
immune system | 5.39e-48 | 93 |
skeletal system | 8.48e-44 | 100 |
lateral plate mesoderm | 4.69e-24 | 203 |
musculoskeletal system | 1.19e-22 | 167 |
connective tissue | 3.96e-17 | 371 |
mesoderm | 3.11e-12 | 315 |
mesoderm-derived structure | 3.11e-12 | 315 |
presumptive mesoderm | 3.11e-12 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.64e-13 | 31 |
leukemia | 1.04e-09 | 39 |