FFCP PHASE1:Hg19::chr3:55521350..55521362,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7474 | |EntrezGene=7474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12784 | |HGNC=12784 | ||
|TSSclassifier=strong | |||
|UniProt=P41221 | |UniProt=P41221 | ||
|association_with_transcript=-19bp_to_ENST00000264634,NM_003392,uc003dhn.2,uc010hmx.2_5end | |association_with_transcript=-19bp_to_ENST00000264634,NM_003392,uc003dhn.2,uc010hmx.2_5end | ||
|cluster_id=chr3:55521350..55521362,- | |||
|coexpression_cluster_id=C1080 | |||
|description=CAGE_peak_17_at_WNT5A_5end | |description=CAGE_peak_17_at_WNT5A_5end | ||
|id=chr3:55521350..55521362,- | |id=chr3:55521350..55521362,- | ||
|ontology_enrichment_celltype=CL:0000055!5.31e-13!180;CL:0000057!1.70e-08!75;CL:0002620!3.18e-07!23 | |ontology_enrichment_celltype=CL:0000055!5.31e-13!180;CL:0000057!1.70e-08!75;CL:0002620!3.18e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.29e-10;6!CL:0000153;4.38e-07;9!CL:0000447;4.38e-07;9!CL:0000134;9.22e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,7.93e-11,6;CL:0000138,7.93e-11,6;CL:0000153,3.19e-07,9;CL:0000447,3.19e-07,9;CL:0000057,7.50e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.84e-07!14 | |ontology_enrichment_disease=DOID:2394!1.84e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;5.21e-13;14!DOID:17;4.44e-12;5!DOID:450;4.44e-12;5!DOID:66;4.44e-12;5!DOID:423;4.44e-12;5!DOID:0080000;4.44e-12;5!DOID:11722;4.44e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.49e-13,14;DOID:17,4.89e-12,5;DOID:450,4.89e-12,5;DOID:66,4.89e-12,5;DOID:423,4.89e-12,5;DOID:0080000,4.89e-12,5;DOID:11722,4.89e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.24e-08!95 | |ontology_enrichment_uberon=UBERON:0003102!4.24e-08!95 | ||
|ontology_enrichment_uberon_v019=UBERON:0002118;9.87e-08;5!UBERON:0000992;1.97e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002118,1.23e-07,5;UBERON:0000992,2.54e-07,13 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,1.34465029290355,0.602694528023977,0,0,0.492484232307152,0.204000691244253,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,1.7412554317715,5.6738522469114,1.24564449799115,0,0,0,0.605399502633369,1.10483290796269,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.53007406669196,4.51204119572301,1.88300474649071,0,1.45990461090791,0.283604451492204,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0.97364218096405,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.619954687054593,13.0680314301026,12.6106133932064,0,0,0,0,0.831192346452549,0.877955241761676,1.5324389789951,6.00952235626387,0,1.61450672119976,1.70845911054854,1.05965950579781,0.300091096084402,1.03052529238439,1.28820270022815,0.744467425326359,0.337552664482532,0,0.757301322732344,1.74894807420369,0,0.710019185033229,0.302256294682921,0,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0,0,0,3.12899064659632,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.337169380156203,0.723033089650446,0.330881918197182,0,0.71181185733329,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,1.03417372606222,0,2.535908257668,2.6593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.80863626235752,0.871533458600294,0.799783929456456,0,0,0,0.239624855491583,0,0,1.44781306667579,1.2328579353023,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0.909382714338778,1.66435439510497,0,0.744323423456331,0.306923946576125,0,0.256278298511402,0,1.60853921143608,0,1.07946785661859,0.355123450626254,0.492762936082855,3.11552657510173,0.116210378459959,0,0,0.276242966807689,0.34444334449382,1.27463817604702,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.41254749960294,0,0,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0,0,0,0.2023155617111,0,2.83331112147576,2.0911118104818,0,0,0.869932992075073,0.55597265731176,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.9554993798559,0.707027159768564,0,0,0,0,0,0,0.811641507850816,0.6196469961995,0,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69376990848337,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.153900517007594,1.13942055847001,0,0,0.434589487688032,0.31900115973192,4.39668448328939,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.617819694732514,0.208843899010911,0,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0.0967563312890851,0.0730893170861856,0.328461828212837,0.0969890164884194,0,0,0,0.397429223405979,0,0,0.0801588202515337,0.213452994739353,1.39866726707491,0,0,0.343189995723929,0,0,0.471388069233591,0.271808412147228,0,1.01998217636322,0,0,0,0,0,0,0,0.229160424011684,2.15361907373044,0,0,0,0,2.52209918479682,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,0.568209015825267,0.50313580350515,0.889811221596536,0,0.151230923763239,0,0.147855149989634,0.318593534327405,8.99606224327209,1.08684069813382,0,0.265841714557995,6.78268580355254,0.751288044986092,1.52322084867518,0,2.00033525122815,1.18151612746737,0.464033759878494,6.36953421917786,0,0,0,0,0,0,0,0,0.231522474323834,0.734210113519403,0.895444205407437,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0.567515953566836,0,0,0,0,0,0.314531883711793,0,0.33946505990805,1.48802444071178,2.85052257795705,0,0.318004350653419,0,0,0.705351887381368,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.397832444232549,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0.236664001461131,0.340853619036631,0.423387050190929,0.68732060563215,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,1.01651473835064,0,0,0.154348316215889,0,0,0,0,0,0,0,0.339854229375634,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0.462175628631418,0,0.126166424835079,0,0.506794004045748,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0.190941474834495,0,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.54503513781167,0,0.140954404095971,0,0.446961094427288,0,0,0,0,0,0,0,0.527533956456907,0,0,1.34465029290355,0.602694528023977,0,0,0.492484232307152,0.204000691244253,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,1.7412554317715,5.6738522469114,1.24564449799115,0,0,0,0.605399502633369,1.10483290796269,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.53007406669196,4.51204119572301,1.88300474649071,0,1.45990461090791,0.283604451492204,0.221729397462564,0.351339142772504,0.0654895377488563,0,0,0.97364218096405,0.522389211897802,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0.302714855289863,0,0.234321431833797,0.624320153660641,0,0.298897361103602,0,0.161872944368132,0,0.204154171254893,0.122834317311768,0.619954687054593,13.0680314301026,12.6106133932064,0,0,0,0,0.831192346452549,0.877955241761676,1.5324389789951,6.00952235626387,0,1.61450672119976,1.70845911054854,1.05965950579781,0.300091096084402,1.03052529238439,1.28820270022815,0.744467425326359,0.337552664482532,0,0.757301322732344,1.74894807420369,0,0.710019185033229,0.302256294682921,0,0.193260853163297,0,0.286804595389004,0,0.132529768321485,0,0,0,0,3.12899064659632,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.337169380156203,0.723033089650446,0.330881918197182,0,0.71181185733329,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.469634776943287,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,1.03417372606222,0,2.535908257668,2.6593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,1.80863626235752,0.871533458600294,0.799783929456456,0,0,0,0.239624855491583,0,0,1.44781306667579,1.2328579353023,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0.271265023699736,0.415941723061614,0.535286966391485,0.157702415033935,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0.909382714338778,1.66435439510497,0,0.744323423456331,0.306923946576125,0,0.256278298511402,0,1.60853921143608,0,1.07946785661859,0.355123450626254,0.492762936082855,3.11552657510173,0.116210378459959,0,0,0.276242966807689,0.34444334449382,1.27463817604702,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.41254749960294,0,0,0,0.290012154876366,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0,0,0,0.2023155617111,0,2.83331112147576,2.0911118104818,0,0,0.869932992075073,0.55597265731176,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.9554993798559,0.707027159768564,0,0,0,0,0,0,0.811641507850816,0.6196469961995,0,0.143411352204052,0,0.35667105148125,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.282431402330337,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69376990848337,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,0,0.153900517007594,1.13942055847001,0,0,0.434589487688032,0.31900115973192,4.39668448328939,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0.617819694732514,0.208843899010911,0,0,0,0,0,0,0.394584402849391,0,0,0,0.150323419414493,0.311064574191741,0,0,0,0,0,0,0.520679215005393,0,0,0,0,0.0967563312890851,0.0730893170861856,0.328461828212837,0.0969890164884194,0,0,0,0.397429223405979,0,0,0.0801588202515337,0.213452994739353,1.39866726707491,0,0,0.343189995723929,0,0,0.471388069233591,0.271808412147228,0,1.01998217636322,0,0,0,0,0,0,0,0.229160424011684,2.15361907373044,0,0,0,0,2.52209918479682,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,1.19271615249795,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.701139929541673,0,0.568209015825267,0.50313580350515,0.889811221596536,0,0.151230923763239,0,0.147855149989634,0.318593534327405,8.99606224327209,1.08684069813382,0,0.265841714557995,6.78268580355254,0.751288044986092,1.52322084867518,0,2.00033525122815,1.18151612746737,0.464033759878494,6.36953421917786,0,0,0,0,0,0,0,0,0.231522474323834,0.734210113519403,0.895444205407437,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0.567515953566836,0,0,0,0,0,0.314531883711793,0,0.33946505990805,1.48802444071178,2.85052257795705,0,0.318004350653419,0,0,0.705351887381368,1.531227386766,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0.397832444232549,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0,0,0,0,0.266107110487916,0,0,0,0,0.118193840883968,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0.236664001461131,0.340853619036631,0.423387050190929,0.68732060563215,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,1.01651473835064,0,0,0.154348316215889,0,0,0,0,0,0,0,0.339854229375634,0,0,0.0999411559249289,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0.462175628631418,0,0.126166424835079,0,0.506794004045748,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,0,0,0,0.224263725161227,0.190941474834495,0,0.435433495793923,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0.244482888365733,0,0,0,0 | ||
|short_description=p17@WNT5A | |short_description=p17@WNT5A | ||
}} | }} |
Latest revision as of 03:06, 19 September 2015
Short description: | p17@WNT5A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_WNT5A_5end |
Coexpression cluster: | C1080_Fibroblast_mesenchymal_neuroectodermal_Hair_Mesenchymal_Smooth_alveolar |
Association with transcript: | -19bp_to_ENST00000264634, NM_003392, uc003dhn.2, uc010hmx.2_5end |
EntrezGene: | WNT5A |
HGNC: | 12784 |
UniProt: | P41221 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 7.93e-11 | 6 |
chondrocyte | 7.93e-11 | 6 |
GAG secreting cell | 3.19e-07 | 9 |
carbohydrate secreting cell | 3.19e-07 | 9 |
fibroblast | 7.50e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
right ovary | 1.23e-07 | 5 |
female gonad | 2.54e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.49e-13 | 14 |
musculoskeletal system disease | 4.89e-12 | 5 |
myotonic disease | 4.89e-12 | 5 |
muscle tissue disease | 4.89e-12 | 5 |
myopathy | 4.89e-12 | 5 |
muscular disease | 4.89e-12 | 5 |
myotonic dystrophy | 4.89e-12 | 5 |