FFCP PHASE1:Hg19::chr18:25531579..25531591,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1000 | |EntrezGene=1000 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1759 | |HGNC=1759 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=213bp_to_BX648579_5end | |association_with_transcript=213bp_to_BX648579_5end | ||
|cluster_id=chr18:25531579..25531591,- | |||
|description=CAGE_peak_8_at_CDH2_5end | |description=CAGE_peak_8_at_CDH2_5end | ||
|id=chr18:25531579..25531591,- | |id=chr18:25531579..25531591,- | ||
|ontology_enrichment_celltype=CL:0000095!1.94e-07!17;CL:0000123!1.94e-07!17;CL:0000055!2.10e-07!180;CL:0000359!4.22e-07!32;CL:0002321!6.61e-07!248;CL:0000077!6.65e-07!19;CL:0002319!6.91e-07!25;CL:0000220!7.42e-07!246;CL:0000222!8.57e-07!119 | |ontology_enrichment_celltype=CL:0000095!1.94e-07!17;CL:0000123!1.94e-07!17;CL:0000055!2.10e-07!180;CL:0000359!4.22e-07!32;CL:0002321!6.61e-07!248;CL:0000077!6.65e-07!19;CL:0002319!6.91e-07!25;CL:0000220!7.42e-07!246;CL:0000222!8.57e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002334;7.63e-13;12!CL:0000306;1.58e-08;4!CL:0002222;1.58e-08;4!CL:0002224;1.58e-08;4!CL:0002583;1.53e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.63e-13,12;CL:0000306,1.63e-08,4;CL:0002222,1.63e-08,4;CL:0002224,1.63e-08,4;CL:0002583,1.59e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.66e-07!14 | |ontology_enrichment_disease=DOID:2394!2.66e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;6.86e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.46e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000025!1.10e-13!194;UBERON:0000483!1.86e-13!309;UBERON:0000119!5.93e-13!312;UBERON:0000477!7.51e-13!286;UBERON:0004111!9.58e-11!241;UBERON:0003075!1.34e-10!86;UBERON:0007284!1.34e-10!86;UBERON:0002346!6.79e-10!90;UBERON:0003914!8.55e-10!118;UBERON:0004872!2.20e-09!84;UBERON:0001637!4.23e-09!42;UBERON:0003509!4.23e-09!42;UBERON:0004572!4.23e-09!42;UBERON:0001981!3.37e-08!60;UBERON:0007500!3.37e-08!60;UBERON:0004537!3.37e-08!60;UBERON:0006965!3.37e-08!60;UBERON:0000073!6.69e-08!94;UBERON:0001016!6.69e-08!94;UBERON:0002049!7.02e-08!79;UBERON:0007798!7.02e-08!79;UBERON:0000475!8.46e-08!365;UBERON:0007625!1.10e-07!11;UBERON:0005743!1.95e-07!86;UBERON:0000481!2.18e-07!347;UBERON:0000055!3.20e-07!69;UBERON:0001009!9.91e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;1.58e-08;4!UBERON:0005389;1.58e-08;4!UBERON:0000484;1.58e-08;4!UBERON:0000965;1.58e-08;4!UBERON:0001803;1.58e-08;4!UBERON:0007625;9.60e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,1.63e-08,4;UBERON:0005389,1.63e-08,4;UBERON:0000484,1.63e-08,4;UBERON:0002546,1.63e-08,4;UBERON:0000965,1.63e-08,4;UBERON:0001803,1.63e-08,4;UBERON:0003073,1.63e-08,4;UBERON:0005426,1.63e-08,4;UBERON:0007625,1.26e-07,11 | |||
|phase1_expression=1.45342703416445,0.428201047781966,2.96004248601539,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0.331397375727916,2.01697543935533,3.61616716814386,1.46062018077475,0.975865597581014,0.123121058076788,0.204000691244253,0.313454721478088,0.85870796139317,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0,0,0,0,0,1.03988298880475,2.21729397462564,0.87834785693126,0.130979075497713,0,0,0.97364218096405,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,3.47880366186723,0.633152558322899,0.397227542439656,1.14734648299525,1.77334191099179,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0.453728732640084,0,0,0.635795703478686,0,0.103052529238439,0.257640540045629,0,1.85653965465393,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0.265059536642971,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0.473227200159376,0.505754070234305,0.241011029883482,0.441175890929576,0,1.18635309555548,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,2.43453850447661,1.29149563659404,0,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71470603091333,0,0.845302752556,0.797814349754612,2.08014873822732,0,0,0,0.428933980974443,0,0,0,0,1.58390374586686,0.904318131178758,0,1.09970290300263,0,0,0,0.479249710983165,0,0,0.868687840005475,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0.356857977594324,0.630809660135739,0,0,0,0,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.992431231275107,1.68808170616869,1.68396056659844,4.86928767171664,0,1.76939313257968,0,1.69630663182921,1.06537035187876,0.164254312027618,1.55776328755086,0,0,0.40101294060657,0,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,1.07821471946181,0,1.46139224653261,0.527758144464379,0,0,0.647747748306418,0,0.812839312631559,0,0.254876273045038,0,0.671624264166535,0,0,0.512900250232778,0.984043937099117,0.976135183992909,0.309123034943167,0.0915694648183434,0,0,0,3.21367859688319,0.193341436584244,0.154048617114644,0,0,0,0,0.340906509664404,0.267096106940212,0.165284915360978,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.74129687641568,0.286249773483982,0,0,0.571890581771475,0,0,0.318203247925937,0,0,0.274537029736055,0,0.808729926293264,0,0,0,3.65570234446927,0,0,0,1.13008116620243,0,3.98063385144732,0.876901770507525,0,0,1.62328301570163,0.30982349809975,1.40847801266121,0.573645408816206,0.687743287091848,0.7133421029625,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.984685914873589,0.445234820091624,0,0,0.19924798825107,0,0,0.715880777515084,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0,0,1.03423011972439,0,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0.591095237907095,0.219385397153973,0,0,0,2.84855139617503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.702793337176017,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0.137041924646751,0.19871461170299,0.0633107959558787,0,0,0,0,0,0.80175617316141,0.343189995723929,0,0.372757606696298,0,1.22313785466253,0.941425616810999,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0.859530882839914,0,0.837847203816763,0.916641696046735,3.58936512288407,0,0,2.00854311697685,0.873385142327441,2.88239906833923,1.16495949527454,0.393915911536118,0.164831716762333,0.404421263125109,0,0,0,0.272406812223151,0.803765742325096,0.550157746388935,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0.191915197319445,0.714695326373367,0,0,0,4.32110745600634,0.979762080328227,2.39460383124975,0,0.511164065356265,0.113312091520126,0,0,0.387848869084652,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0.573409195690071,0.332787154610557,0.0620964029413835,0,1.12482367165896,0,0.285465333544967,0,1.40500471742064,0.28984205722165,0.149254802886874,0,0,0,0,0.889811221596536,0.915360273587694,0.151230923763239,0.621748802331122,0.443565449968902,1.11507737014592,0.449803112163605,0.621051827505038,1.65882483136342,1.32920857278997,1.04349012362347,1.05180326298053,0.380805212168795,1.62748293281865,0.181848659202559,0.966695013382396,0.928067519756987,0,0,0,0,0,0.385239660814607,0.428883182749851,0.260994291965212,0,0.694567422971502,0.489473409012935,1.96997725189636,0.308801447160972,0.877136198314828,0,4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| ||
|short_description=p8@CDH2 | |short_description=p8@CDH2 | ||
}} | }} |
Latest revision as of 03:00, 19 September 2015
Short description: | p8@CDH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 213bp_to_BX648579_5end |
EntrezGene: | CDH2 |
HGNC: | 1759 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.63e-13 | 12 |
crystallin accumulating cell | 1.63e-08 | 4 |
vertebrate lens cell | 1.63e-08 | 4 |
lens epithelial cell | 1.63e-08 | 4 |
subcutaneous preadipocyte | 1.59e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 1.63e-08 | 4 |
transparent eye structure | 1.63e-08 | 4 |
simple cuboidal epithelium | 1.63e-08 | 4 |
cranial placode | 1.63e-08 | 4 |
lens of camera-type eye | 1.63e-08 | 4 |
epithelium of lens | 1.63e-08 | 4 |
lens placode | 1.63e-08 | 4 |
lens vesicle | 1.63e-08 | 4 |
pigment epithelium of eye | 1.26e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.46e-08 | 14 |