FFCP PHASE1:Hg19::chr8:75736712..75736723,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51050 | |EntrezGene=51050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8946 | |HGNC=8946 | ||
|TSSclassifier=strong | |||
|UniProt=O43692 | |UniProt=O43692 | ||
|association_with_transcript=-48bp_to_ENST00000260113,NM_015886,uc003yal.2_5end | |association_with_transcript=-48bp_to_ENST00000260113,NM_015886,uc003yal.2_5end | ||
|cluster_id=chr8:75736712..75736723,+ | |||
|coexpression_cluster_id=C4773 | |||
|description=CAGE_peak_2_at_PI15_5end | |description=CAGE_peak_2_at_PI15_5end | ||
|id=chr8:75736712..75736723,+ | |id=chr8:75736712..75736723,+ | ||
|ontology_enrichment_celltype=CL:0000128!1.10e-10!7;CL:0000126!1.10e-10!7;CL:0000127!1.10e-10!7;CL:0002453!1.10e-10!7;CL:0000243!1.71e-08!15;CL:0000125!1.71e-08!15;CL:0000030!1.71e-08!15;CL:0000339!1.71e-08!15;CL:0002319!2.52e-07!25;CL:0000095!2.61e-07!17;CL:0000123!2.61e-07!17 | |ontology_enrichment_celltype=CL:0000128!1.10e-10!7;CL:0000126!1.10e-10!7;CL:0000127!1.10e-10!7;CL:0002453!1.10e-10!7;CL:0000243!1.71e-08!15;CL:0000125!1.71e-08!15;CL:0000030!1.71e-08!15;CL:0000339!1.71e-08!15;CL:0002319!2.52e-07!25;CL:0000095!2.61e-07!17;CL:0000123!2.61e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000128;3.78e-13;7!CL:0000126;3.78e-13;7!CL:0000127;3.78e-13;7!CL:0002605;1.15e-11;3!CL:0000243;2.40e-07;15!CL:0000125;2.40e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,3.60e-13,7;CL:0000126,3.60e-13,7;CL:0000127,3.60e-13,7;CL:0002453,3.60e-13,7;CL:0002605,1.04e-11,3;CL:0000243,2.35e-07,15;CL:0000125,2.35e-07,15;CL:0000030,2.35e-07,15;CL:0000339,2.35e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;2.40e-07;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1909;4.12e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.93e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-22!115;UBERON:0000073!1.81e-14!94;UBERON:0001016!1.81e-14!94;UBERON:0003075!7.85e-13!86;UBERON:0007284!7.85e-13!86;UBERON:0001017!8.07e-13!82;UBERON:0002346!1.06e-12!90;UBERON:0005743!1.62e-12!86;UBERON:0001049!3.68e-12!57;UBERON:0005068!3.68e-12!57;UBERON:0006241!3.68e-12!57;UBERON:0007135!3.68e-12!57;UBERON:0002616!2.09e-10!59;UBERON:0000955!4.76e-10!69;UBERON:0006238!4.76e-10!69;UBERON:0000924!5.49e-10!173;UBERON:0006601!5.49e-10!173;UBERON:0004121!6.28e-10!169;UBERON:0000481!1.58e-08!347;UBERON:0003076!1.09e-07!15;UBERON:0003057!1.09e-07!15;UBERON:0000922!1.31e-07!612;UBERON:0000468!2.71e-07!659;UBERON:0002050!4.34e-07!605;UBERON:0005423!4.34e-07!605;UBERON:0000062!6.34e-07!511;UBERON:0000153!7.63e-07!129;UBERON:0007811!7.63e-07!129;UBERON:0003080!9.08e-07!42 | |ontology_enrichment_uberon=UBERON:0007023!1.06e-22!115;UBERON:0000073!1.81e-14!94;UBERON:0001016!1.81e-14!94;UBERON:0003075!7.85e-13!86;UBERON:0007284!7.85e-13!86;UBERON:0001017!8.07e-13!82;UBERON:0002346!1.06e-12!90;UBERON:0005743!1.62e-12!86;UBERON:0001049!3.68e-12!57;UBERON:0005068!3.68e-12!57;UBERON:0006241!3.68e-12!57;UBERON:0007135!3.68e-12!57;UBERON:0002616!2.09e-10!59;UBERON:0000955!4.76e-10!69;UBERON:0006238!4.76e-10!69;UBERON:0000924!5.49e-10!173;UBERON:0006601!5.49e-10!173;UBERON:0004121!6.28e-10!169;UBERON:0000481!1.58e-08!347;UBERON:0003076!1.09e-07!15;UBERON:0003057!1.09e-07!15;UBERON:0000922!1.31e-07!612;UBERON:0000468!2.71e-07!659;UBERON:0002050!4.34e-07!605;UBERON:0005423!4.34e-07!605;UBERON:0000062!6.34e-07!511;UBERON:0000153!7.63e-07!129;UBERON:0007811!7.63e-07!129;UBERON:0003080!9.08e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.64e-08;2!UBERON:0000922;2.50e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,6.09e-08,2;UBERON:0005409,2.48e-07,25;UBERON:0000945,4.06e-07,8;UBERON:0010039,4.06e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.59909341216098,0.662794751455832,0,0,0,0,5.0479633811483,0.612002073732759,5.01527554364941,3.72106783270374,4.37998160233229,4.89616294419731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,0.12786256184353,0,0,0,0,0,2.6469748805939,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8008993185979,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.205654985406647,0,3.14409075893636,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.91381625495949,0,0,0,1.71768088406796,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,17.0319204562119,20.0498084807029,0,0,0,0,0.154048617114644,0.15350367472613,0,0.859361958946189,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0.307240764308458,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.146508179271894,9.10203913121351,0,0,0,0,0,0,0.422008249231538,0,0,4.64475897881586,0,0.828851746593443,0,0.102268682502155,0,0,0,0,0,1.7755813014648,0,0,0,0,0,0,0,4.34999745260876,0,0,0,0,0,0,0,0.844175070377856,0,0.110579259931225,0,0.438770794307945,0,0,2.6932590476329,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,0.973033209536731,3.05515072466813,0,0,0,0,5.61804353109152,0,0,0,0,1.97292201424695,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.97035336011451,0,0,0,0,0.0969890164884194,20.2106530123536,2.25980740780532,0,0,0,0,0,0,0,0,21.8764898676899,0,0,0,0,0,0,29.2734884616243,0,0,1.09524303113594,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,1.11585728720936,3.42635709682304,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.944182586429966,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.19009341568421,0,0,0.640724475406168,8.17462386518263,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,0.573409195690071,0.776503360757966,0,0,0.124980407962107,2.27473676312472,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754773679776773,0,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,14.7198004366043,3.45967510406583,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,0.496211178389294,0.703484977438482,0,0,1.00885116665647,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,2.43328587836593,0.785577949580009,0,2.73947616152849,0,0,0.0714765441766563,0,0,3.30330717374901,0,0,0,0,0,0.236664001461131,0.255640214277473,0.846774100381858,0,0,0,0,0,0,0,0,4.6392577253528,3.88568794447312,0,0,10.8217282607587,0,0,0,0.694567422971502,0.655678681511872,0,2.69663153929296,0,0,0.594092800654172,0.8453114551668,0,1.59772660565751,2.19156819110162,0,0,0,0,2.19100916473955,0.458729283404541,0,0,0,0,2.1161073620616,0,0,0,0.126166424835079,0,0,0,0,0,0,0.606229585745915,0,0,0.413731983447581,0.639701945702943,3.80903090341985,0,0.31037357147929,0,0,2.02117188958219,0,0.684466602170562,0,1.36272190246085,4.65724499164419,0,0,0,0,0,3.54500188130313,8.13792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.59909341216098,0.662794751455832,0,0,0,0,5.0479633811483,0.612002073732759,5.01527554364941,3.72106783270374,4.37998160233229,4.89616294419731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.03630773733273,0.12786256184353,0,0,0,0,0,2.6469748805939,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8008993185979,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.205654985406647,0,3.14409075893636,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0.325736184293735,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,1.91381625495949,0,0,0,1.71768088406796,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,17.0319204562119,20.0498084807029,0,0,0,0,0.154048617114644,0.15350367472613,0,0.859361958946189,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0.307240764308458,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.146508179271894,9.10203913121351,0,0,0,0,0,0,0.422008249231538,0,0,4.64475897881586,0,0.828851746593443,0,0.102268682502155,0,0,0,0,0,1.7755813014648,0,0,0,0,0,0,0,4.34999745260876,0,0,0,0,0,0,0,0.844175070377856,0,0.110579259931225,0,0.438770794307945,0,0,2.6932590476329,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,4.97630965539252,0.973033209536731,3.05515072466813,0,0,0,0,5.61804353109152,0,0,0,0,1.97292201424695,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0.173559738335131,0,0,2.97035336011451,0,0,0,0,0.0969890164884194,20.2106530123536,2.25980740780532,0,0,0,0,0,0,0,0,21.8764898676899,0,0,0,0,0,0,29.2734884616243,0,0,1.09524303113594,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,1.11585728720936,3.42635709682304,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.157611414598396,0.944182586429966,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.19009341568421,0,0,0.640724475406168,8.17462386518263,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,0.573409195690071,0.776503360757966,0,0,0.124980407962107,2.27473676312472,4.28198000317451,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.754773679776773,0,0.109209638192014,0,0,0,0.558644917973244,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,14.7198004366043,3.45967510406583,0,0,0,0,0,0.0675375846183947,0,0,0,0,1.09651553371436,0.496211178389294,0.703484977438482,0,0,1.00885116665647,0.606965604236632,0,0.0887023701626388,0,0,0,0,0,0,2.43328587836593,0.785577949580009,0,2.73947616152849,0,0,0.0714765441766563,0,0,3.30330717374901,0,0,0,0,0,0.236664001461131,0.255640214277473,0.846774100381858,0,0,0,0,0,0,0,0,4.6392577253528,3.88568794447312,0,0,10.8217282607587,0,0,0,0.694567422971502,0.655678681511872,0,2.69663153929296,0,0,0.594092800654172,0.8453114551668,0,1.59772660565751,2.19156819110162,0,0,0,0,2.19100916473955,0.458729283404541,0,0,0,0,2.1161073620616,0,0,0,0.126166424835079,0,0,0,0,0,0,0.606229585745915,0,0,0.413731983447581,0.639701945702943,3.80903090341985,0,0.31037357147929,0,0,2.02117188958219,0,0.684466602170562,0,1.36272190246085,4.65724499164419,0,0,0,0,0,3.54500188130313,8.13792356631477,0,0,0 | ||
|short_description=p2@PI15 | |short_description=p2@PI15 | ||
}} | }} |
Latest revision as of 02:55, 19 September 2015
Short description: | p2@PI15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PI15_5end |
Coexpression cluster: | C4773_gastric_glioblastoma_extraskeletal_adrenal_lung_small_uterus |
Association with transcript: | -48bp_to_ENST00000260113, NM_015886, uc003yal.2_5end |
EntrezGene: | PI15 |
HGNC: | 8946 |
UniProt: | O43692 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 3.60e-13 | 7 |
macroglial cell | 3.60e-13 | 7 |
astrocyte | 3.60e-13 | 7 |
oligodendrocyte precursor cell | 3.60e-13 | 7 |
astrocyte of the cerebral cortex | 1.04e-11 | 3 |
glial cell (sensu Vertebrata) | 2.35e-07 | 15 |
glial cell | 2.35e-07 | 15 |
glioblast | 2.35e-07 | 15 |
glioblast (sensu Vertebrata) | 2.35e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 6.09e-08 | 2 |
gastrointestinal system | 2.48e-07 | 25 |
stomach | 4.06e-07 | 8 |
food storage organ | 4.06e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.93e-08 | 2 |