FFCP PHASE1:Hg19::chr18:24765419..24765431,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:24765419..24765431,-
|short_description=p5@CHST9
|description=CAGE_peak_5_at_CHST9_5end
|association_with_transcript=-130bp_to_ENST00000284224,NM_031422,N...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83539 | |EntrezGene=83539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19898 | |HGNC=19898 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L1S5 | |UniProt=Q7L1S5 | ||
|association_with_transcript=-130bp_to_ENST00000284224,NM_031422,NR_045066,uc002kwe.2_5end | |||
|cluster_id=chr18:24765419..24765431,- | |||
|description=CAGE_peak_5_at_CHST9_5end | |||
|id=chr18:24765419..24765431,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.66e-21;2!CL:0000242;4.66e-21;2!CL:0000312;2.97e-09;5!CL:0000240;6.33e-08;6!CL:0000311;6.33e-08;6!CL:0000079;6.33e-08;6!CL:0000237;6.33e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.66e-21,2;CL:0000312,2.97e-09,5;CL:0000240,6.34e-08,6;CL:0000311,6.34e-08,6;CL:0000079,6.34e-08,6;CL:0000237,6.34e-08,6;CL:0000036,6.34e-08,6;CL:0000357,6.34e-08,6;CL:0000114,6.34e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.48e-40;1!CL:0000357;6.33e-08;6!CL:0000114;6.33e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.71e-26!115;UBERON:0001049!1.59e-15!57;UBERON:0005068!1.59e-15!57;UBERON:0006241!1.59e-15!57;UBERON:0007135!1.59e-15!57;UBERON:0002616!5.09e-13!59;UBERON:0002020!6.87e-12!34;UBERON:0003528!6.87e-12!34;UBERON:0003075!2.00e-11!86;UBERON:0007284!2.00e-11!86;UBERON:0002780!2.33e-11!41;UBERON:0001890!2.33e-11!41;UBERON:0006240!2.33e-11!41;UBERON:0003080!4.99e-11!42;UBERON:0002619!8.52e-11!22;UBERON:0002346!1.02e-10!90;UBERON:0001869!1.20e-10!32;UBERON:0000955!2.18e-10!69;UBERON:0006238!2.18e-10!69;UBERON:0002791!2.86e-10!33;UBERON:0005743!6.27e-10!86;UBERON:0001893!6.51e-10!34;UBERON:0000073!1.05e-09!94;UBERON:0001016!1.05e-09!94;UBERON:0001017!2.10e-09!82;UBERON:0000956!2.31e-09!25;UBERON:0000203!2.31e-09!25;UBERON:0001950!2.68e-09!20;UBERON:0004111!5.94e-09!241;UBERON:0000153!7.93e-09!129;UBERON:0007811!7.93e-09!129;UBERON:0000033!1.82e-08!123;UBERON:0003056!5.67e-08!61;UBERON:0004121!9.08e-08!169;UBERON:0000924!1.85e-07!173;UBERON:0006601!1.85e-07!173;UBERON:0002298!1.92e-07!8;UBERON:0000477!5.89e-07!286;UBERON:0000025!8.78e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001831;1.48e-40;1!UBERON:0001567;1.48e-40;1!UBERON:0001044;2.72e-27;6!UBERON:0003293;2.72e-27;6!UBERON:0003294;2.72e-27;6!UBERON:0010047;2.72e-27;6!UBERON:0003408;2.72e-27;6!UBERON:0000167;2.72e-27;6!UBERON:0003127;4.66e-21;2!UBERON:0001954;4.66e-21;2!UBERON:0001829;4.66e-21;2!UBERON:0003022;4.66e-21;2!UBERON:0002421;4.66e-21;2!UBERON:0004089;4.66e-21;2!UBERON:0002600;4.66e-21;2!UBERON:0001041;2.37e-12;14!UBERON:0000161;2.26e-09;19!UBERON:0000166;2.26e-09;19!UBERON:0000349;2.97e-09;5!UBERON:0003126;5.70e-07;7!UBERON:0001005;5.70e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,3.30e-40,1;UBERON:0001567,3.30e-40,1;UBERON:0008801,3.30e-40,1;UBERON:0001044,4.06e-27,6;UBERON:0003293,4.06e-27,6;UBERON:0003294,4.06e-27,6;UBERON:0010047,4.06e-27,6;UBERON:0000167,4.06e-27,6;UBERON:0003127,3.11e-21,2;UBERON:0001954,3.81e-21,2;UBERON:0003022,3.81e-21,2;UBERON:0002421,3.81e-21,2;UBERON:0002600,3.81e-21,2;UBERON:0001829,6.96e-21,2;UBERON:0004089,6.96e-21,2;UBERON:0003408,9.54e-17,10;UBERON:0000349,2.74e-09,5;UBERON:0000166,3.51e-08,22;UBERON:0003126,5.08e-07,7;UBERON:0001005,5.08e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.18628920882415,0,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0.20686599172379,0.426467963801962,0,0,0,0,0,0,0,0,0.26940821205835,1.72133292942423,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.120596438625408,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,1.59045937961861,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0,0.18628920882415,0,0,0,0,0,1.40500471742064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0.319267718114302,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,1.09651553371436,0,0,0.127762427639595,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,1.29068207646083,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0.20686599172379,0.426467963801962,0,0,0,0,0,0,0,0,0.26940821205835,1.72133292942423,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p5@CHST9 | |||
}} | }} |
Latest revision as of 02:53, 19 September 2015
Short description: | p5@CHST9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHST9_5end |
Coexpression cluster: | NA |
Association with transcript: | -130bp_to_ENST00000284224, NM_031422, NR_045066, uc002kwe.2_5end |
EntrezGene: | CHST9 |
HGNC: | 19898 |
UniProt: | Q7L1S5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.66e-21 | 2 |
keratinocyte | 2.97e-09 | 5 |
stratified squamous epithelial cell | 6.34e-08 | 6 |
keratin accumulating cell | 6.34e-08 | 6 |
stratified epithelial cell | 6.34e-08 | 6 |
keratinizing barrier epithelial cell | 6.34e-08 | 6 |
epithelial fate stem cell | 6.34e-08 | 6 |
stratified epithelial stem cell | 6.34e-08 | 6 |
surface ectodermal cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 3.30e-40 | 1 |
cheek | 3.30e-40 | 1 |
parotid gland primordium | 3.30e-40 | 1 |
saliva-secreting gland | 4.06e-27 | 6 |
gland of oral region | 4.06e-27 | 6 |
gland of foregut | 4.06e-27 | 6 |
oral gland | 4.06e-27 | 6 |
oral cavity | 4.06e-27 | 6 |
open tracheal system trachea | 3.11e-21 | 2 |
Ammon's horn | 3.81e-21 | 2 |
lobe parts of cerebral cortex | 3.81e-21 | 2 |
hippocampal formation | 3.81e-21 | 2 |
limbic lobe | 3.81e-21 | 2 |
major salivary gland | 6.96e-21 | 2 |
midface | 6.96e-21 | 2 |
gland of gut | 9.54e-17 | 10 |
limbic system | 2.74e-09 | 5 |
oral opening | 3.51e-08 | 22 |
trachea | 5.08e-07 | 7 |
respiratory airway | 5.08e-07 | 7 |