FFCP PHASE1:Hg19::chr2:191115237..191115258,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26275 | |EntrezGene=26275 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4908 | |HGNC=4908 | ||
|TSSclassifier=strong | |||
|UniProt=B9A058 | |UniProt=B9A058 | ||
|association_with_transcript=0bp_to_ENST00000410045_5end | |association_with_transcript=0bp_to_ENST00000410045_5end | ||
|cluster_id=chr2:191115237..191115258,- | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_9_at_HIBCH_5end | |description=CAGE_peak_9_at_HIBCH_5end | ||
|id=chr2:191115237..191115258,- | |id=chr2:191115237..191115258,- | ||
|ontology_enrichment_celltype=CL:0002274!3.96e-33!5;CL:0000457!3.96e-33!5;CL:0002191!3.96e-33!5;CL:0000097!3.96e-33!5;CL:0000831!3.96e-33!5;CL:0002028!3.96e-33!5;CL:0000148!1.16e-23!10;CL:0000541!1.16e-23!10;CL:0000163!2.35e-18!9;CL:0000147!9.27e-17!14;CL:0000710!1.44e-11!20;CL:0000075!2.02e-08!27;CL:0002566!3.55e-08!1;CL:0002077!8.75e-07!33 | |ontology_enrichment_celltype=CL:0002274!3.96e-33!5;CL:0000457!3.96e-33!5;CL:0002191!3.96e-33!5;CL:0000097!3.96e-33!5;CL:0000831!3.96e-33!5;CL:0002028!3.96e-33!5;CL:0000148!1.16e-23!10;CL:0000541!1.16e-23!10;CL:0000163!2.35e-18!9;CL:0000147!9.27e-17!14;CL:0000710!1.44e-11!20;CL:0000075!2.02e-08!27;CL:0002566!3.55e-08!1;CL:0002077!8.75e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000097;6.08e-40;5!CL:0000148;1.14e-35;10!CL:0000147;1.19e-25;14!CL:0002566;3.28e-23;1!CL:0000163;1.40e-22;9!CL:0000710;4.07e-18;20!CL:0000075;1.54e-13;27!CL:0002077;6.48e-10;34!CL:0000151;9.95e-10;36!CL:0000149;6.87e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.43e-40,5;CL:0002028,7.43e-40,5;CL:0000148,1.05e-35,10;CL:0000541,1.05e-35,10;CL:0000147,1.12e-25,14;CL:0002566,2.62e-23,1;CL:0000163,1.57e-22,9;CL:0000710,3.90e-18,20;CL:0000075,1.49e-13,27;CL:0002077,7.56e-11,34;CL:0000151,3.33e-10,36;CL:0000333,1.18e-08,41;CL:0000149,6.87e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.46e-08;3 | |||
|ontology_enrichment_disease=DOID:1909!1.77e-14!2;DOID:178!8.51e-08!1;DOID:326!8.51e-08!1;DOID:3978!8.51e-08!1;DOID:3394!8.51e-08!1;DOID:5844!8.51e-08!1 | |ontology_enrichment_disease=DOID:1909!1.77e-14!2;DOID:178!8.51e-08!1;DOID:326!8.51e-08!1;DOID:3978!8.51e-08!1;DOID:3394!8.51e-08!1;DOID:5844!8.51e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:1909;2.07e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.07e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0007029!6.52e-08!1;UBERON:0003112!7.45e-08!1;UBERON:0000032!7.45e-08!1;UBERON:0005253!7.45e-08!1;UBERON:0003128!7.45e-08!1;UBERON:0002241!7.45e-08!1;UBERON:0001703!7.45e-08!1;UBERON:0004761!7.45e-08!1;UBERON:0009617!7.45e-08!1;UBERON:0006834!1.35e-07!1;UBERON:0002372!1.99e-07!1;UBERON:0001961!1.99e-07!1;UBERON:0001744!1.99e-07!1;UBERON:0001735!1.99e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p9@HIBCH | |short_description=p9@HIBCH | ||
}} | }} |
Latest revision as of 02:45, 19 September 2015
Short description: | p9@HIBCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HIBCH_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 0bp_to_ENST00000410045_5end |
EntrezGene: | HIBCH |
HGNC: | 4908 |
UniProt: | B9A058 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.43e-40 | 5 |
basophil mast progenitor cell | 7.43e-40 | 5 |
melanocyte | 1.05e-35 | 10 |
melanoblast | 1.05e-35 | 10 |
pigment cell | 1.12e-25 | 14 |
dark melanocyte | 2.62e-23 | 1 |
endocrine cell | 1.57e-22 | 9 |
neurecto-epithelial cell | 3.90e-18 | 20 |
columnar/cuboidal epithelial cell | 1.49e-13 | 27 |
ecto-epithelial cell | 7.56e-11 | 34 |
secretory cell | 3.33e-10 | 36 |
migratory neural crest cell | 1.18e-08 | 41 |
visual pigment cell | 6.87e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.07e-12 | 2 |