FFCP PHASE1:Hg19::chr1:6845582..6845591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23261 | |EntrezGene=23261 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18806 | |HGNC=18806 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000439411_5end | |association_with_transcript=0bp_to_ENST00000439411_5end | ||
|cluster_id=chr1:6845582..6845591,+ | |||
|description=CAGE_peak_2_at_CAMTA1_5end | |description=CAGE_peak_2_at_CAMTA1_5end | ||
|id=chr1:6845582..6845591,+ | |id=chr1:6845582..6845591,+ |
Latest revision as of 02:44, 19 September 2015
Short description: | p2@CAMTA1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CAMTA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000439411_5end |
EntrezGene: | CAMTA1 |
HGNC: | 18806 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@CAMTA1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.33e-08 | 136 |
mature alpha-beta T cell | 3.44e-07 | 18 |
alpha-beta T cell | 3.44e-07 | 18 |
immature T cell | 3.44e-07 | 18 |
mature T cell | 3.44e-07 | 18 |
immature alpha-beta T cell | 3.44e-07 | 18 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 1.58e-23 | 56 |
neural rod | 1.58e-23 | 56 |
future spinal cord | 1.58e-23 | 56 |
neural keel | 1.58e-23 | 56 |
regional part of nervous system | 3.97e-23 | 53 |
regional part of brain | 3.97e-23 | 53 |
neural plate | 8.55e-21 | 82 |
presumptive neural plate | 8.55e-21 | 82 |
regional part of forebrain | 2.33e-20 | 41 |
forebrain | 2.33e-20 | 41 |
Showing 1 to 10 of 33 entries