FFCP PHASE1:Hg19::chr2:190927447..190927466,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2660 | |EntrezGene=2660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4223 | |HGNC=4223 | ||
|TSSclassifier=strong | |||
|UniProt=O14793,Q53S46 | |UniProt=O14793,Q53S46 | ||
|association_with_transcript=0bp_to_ENST00000260950,NM_005259,uc002urp.2_5end | |association_with_transcript=0bp_to_ENST00000260950,NM_005259,uc002urp.2_5end | ||
|cluster_id=chr2:190927447..190927466,- | |||
|coexpression_cluster_id=C153 | |coexpression_cluster_id=C153 | ||
|description=CAGE_peak_1_at_MSTN_5end | |description=CAGE_peak_1_at_MSTN_5end | ||
|id=chr2:190927447..190927466,- | |id=chr2:190927447..190927466,- | ||
|ontology_enrichment_celltype=CL:0000188!4.66e-10!9;CL:0002620!1.10e-07!23 | |ontology_enrichment_celltype=CL:0000188!4.66e-10!9;CL:0002620!1.10e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000188;6.68e-12;9!CL:0000515;4.66e-07;3!CL:0002590;5.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.02e-12,9;CL:0002590,5.49e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.76e-07!5;DOID:450!2.76e-07!5;DOID:66!2.76e-07!5;DOID:423!2.76e-07!5;DOID:0080000!2.76e-07!5;DOID:11722!2.76e-07!5 | |ontology_enrichment_disease=DOID:17!2.76e-07!5;DOID:450!2.76e-07!5;DOID:66!2.76e-07!5;DOID:423!2.76e-07!5;DOID:0080000!2.76e-07!5;DOID:11722!2.76e-07!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.52e-25!57;UBERON:0005068!1.52e-25!57;UBERON:0006241!1.52e-25!57;UBERON:0007135!1.52e-25!57;UBERON:0002616!1.30e-24!59;UBERON:0000955!2.70e-21!69;UBERON:0006238!2.70e-21!69;UBERON:0007023!4.23e-21!115;UBERON:0001017!1.98e-20!82;UBERON:0005743!5.27e-20!86;UBERON:0000153!1.75e-18!129;UBERON:0007811!1.75e-18!129;UBERON:0000475!5.01e-18!365;UBERON:0000033!6.62e-18!123;UBERON:0000073!7.25e-18!94;UBERON:0001016!7.25e-18!94;UBERON:0003075!7.55e-17!86;UBERON:0007284!7.55e-17!86;UBERON:0002346!1.69e-16!90;UBERON:0002780!3.87e-15!41;UBERON:0001890!3.87e-15!41;UBERON:0006240!3.87e-15!41;UBERON:0003080!1.33e-14!42;UBERON:0003076!2.61e-13!15;UBERON:0003057!2.61e-13!15;UBERON:0002020!4.11e-13!34;UBERON:0003528!4.11e-13!34;UBERON:0001893!5.41e-13!34;UBERON:0004121!1.14e-12!169;UBERON:0000924!1.23e-12!173;UBERON:0006601!1.23e-12!173;UBERON:0000481!2.43e-12!347;UBERON:0002791!3.20e-12!33;UBERON:0001869!2.29e-11!32;UBERON:0003056!2.25e-10!61;UBERON:0004733!2.72e-10!12;UBERON:0002028!2.72e-10!12;UBERON:0007277!2.72e-10!12;UBERON:0004732!2.63e-09!13;UBERON:0002619!8.02e-09!22;UBERON:0000956!1.06e-08!25;UBERON:0000203!1.06e-08!25;UBERON:0001950!2.28e-08!20;UBERON:0000468!2.73e-08!659;UBERON:0002298!9.60e-08!8;UBERON:0002680!2.63e-07!9;UBERON:0001895!2.63e-07!9;UBERON:0010092!2.63e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!1.52e-25!57;UBERON:0005068!1.52e-25!57;UBERON:0006241!1.52e-25!57;UBERON:0007135!1.52e-25!57;UBERON:0002616!1.30e-24!59;UBERON:0000955!2.70e-21!69;UBERON:0006238!2.70e-21!69;UBERON:0007023!4.23e-21!115;UBERON:0001017!1.98e-20!82;UBERON:0005743!5.27e-20!86;UBERON:0000153!1.75e-18!129;UBERON:0007811!1.75e-18!129;UBERON:0000475!5.01e-18!365;UBERON:0000033!6.62e-18!123;UBERON:0000073!7.25e-18!94;UBERON:0001016!7.25e-18!94;UBERON:0003075!7.55e-17!86;UBERON:0007284!7.55e-17!86;UBERON:0002346!1.69e-16!90;UBERON:0002780!3.87e-15!41;UBERON:0001890!3.87e-15!41;UBERON:0006240!3.87e-15!41;UBERON:0003080!1.33e-14!42;UBERON:0003076!2.61e-13!15;UBERON:0003057!2.61e-13!15;UBERON:0002020!4.11e-13!34;UBERON:0003528!4.11e-13!34;UBERON:0001893!5.41e-13!34;UBERON:0004121!1.14e-12!169;UBERON:0000924!1.23e-12!173;UBERON:0006601!1.23e-12!173;UBERON:0000481!2.43e-12!347;UBERON:0002791!3.20e-12!33;UBERON:0001869!2.29e-11!32;UBERON:0003056!2.25e-10!61;UBERON:0004733!2.72e-10!12;UBERON:0002028!2.72e-10!12;UBERON:0007277!2.72e-10!12;UBERON:0004732!2.63e-09!13;UBERON:0002619!8.02e-09!22;UBERON:0000956!1.06e-08!25;UBERON:0000203!1.06e-08!25;UBERON:0001950!2.28e-08!20;UBERON:0000468!2.73e-08!659;UBERON:0002298!9.60e-08!8;UBERON:0002680!2.63e-07!9;UBERON:0001895!2.63e-07!9;UBERON:0010092!2.63e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;3.78e-26;16!UBERON:0002036;3.78e-26;16!UBERON:0002385;4.80e-12;31!UBERON:0001015;4.80e-12;31!UBERON:0000383;4.80e-12;31!UBERON:0000341;1.68e-10;2!UBERON:0002680;1.31e-07;9!UBERON:0001895;1.31e-07;9!UBERON:0001723;3.45e-07;3!UBERON:0001033;3.45e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.61e-10,2;UBERON:0001134,6.49e-08,62;UBERON:0002036,6.49e-08,62;UBERON:0003082,6.49e-08,62;UBERON:0002680,1.25e-07,9;UBERON:0001895,1.25e-07,9;UBERON:0010092,1.25e-07,9;UBERON:0002385,1.36e-07,64;UBERON:0001015,1.36e-07,64;UBERON:0000383,1.36e-07,64;UBERON:0001723,3.30e-07,3;UBERON:0001033,3.30e-07,3;UBERON:0010056,3.30e-07,3 | |||
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| ||
|short_description=p1@MSTN | |short_description=p1@MSTN | ||
}} | }} |
Latest revision as of 02:35, 19 September 2015
Short description: | p1@MSTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MSTN_5end |
Coexpression cluster: | C153_rhabdomyosarcoma_liposarcoma_pancreatic_somatostatinoma_Reticulocytes_lymphoma_testicular |
Association with transcript: | 0bp_to_ENST00000260950, NM_005259, uc002urp.2_5end |
EntrezGene: | MSTN |
HGNC: | 4223 |
UniProt: | O14793Q53S46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.02e-12 | 9 |
smooth muscle cell of the brain vasculature | 5.49e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
throat | 1.61e-10 | 2 |
skeletal muscle tissue | 6.49e-08 | 62 |
striated muscle tissue | 6.49e-08 | 62 |
myotome | 6.49e-08 | 62 |
regional part of metencephalon | 1.25e-07 | 9 |
metencephalon | 1.25e-07 | 9 |
future metencephalon | 1.25e-07 | 9 |
muscle tissue | 1.36e-07 | 64 |
musculature | 1.36e-07 | 64 |
musculature of body | 1.36e-07 | 64 |
tongue | 3.30e-07 | 3 |
gustatory system | 3.30e-07 | 3 |
future tongue | 3.30e-07 | 3 |