FFCP PHASE1:Hg19::chr15:75287827..75287832,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=192683 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30386 | |||
|TSSclassifier=strong | |||
|UniProt=Q8TAC9 | |||
|association_with_transcript=-43bp_to_ENST00000361900,ENST00000425597,NM_001178111,NM_001178112,NM_138967,NR_033660_5end | |||
|cluster_id=chr15:75287827..75287832,+ | |||
|description=CAGE_peak_3_at_SCAMP5_5end | |||
|id=chr15:75287827..75287832,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000669;1.54e-08;4!CL:0000650;4.75e-08;2!CL:1000500;4.75e-08;2!CL:1000618;4.75e-08;2!CL:1001318;4.75e-08;2!CL:0002173;4.75e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000669,2.50e-08,4;CL:0000650,1.01e-07,2;CL:1000500,1.01e-07,2;CL:1000618,1.01e-07,2;CL:1001318,1.01e-07,2;CL:0002173,1.01e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.69e-22!94;UBERON:0001016!2.69e-22!94;UBERON:0005743!8.73e-21!86;UBERON:0001017!1.12e-19!82;UBERON:0001049!4.04e-19!57;UBERON:0005068!4.04e-19!57;UBERON:0006241!4.04e-19!57;UBERON:0007135!4.04e-19!57;UBERON:0002346!3.12e-16!90;UBERON:0000955!3.89e-16!69;UBERON:0006238!3.89e-16!69;UBERON:0002616!4.47e-16!59;UBERON:0003075!2.27e-15!86;UBERON:0007284!2.27e-15!86;UBERON:0002020!3.96e-14!34;UBERON:0003528!3.96e-14!34;UBERON:0001893!3.96e-14!34;UBERON:0000924!4.05e-14!173;UBERON:0006601!4.05e-14!173;UBERON:0002780!4.07e-14!41;UBERON:0001890!4.07e-14!41;UBERON:0006240!4.07e-14!41;UBERON:0003080!1.66e-13!42;UBERON:0001869!1.72e-13!32;UBERON:0002791!2.43e-13!33;UBERON:0004121!2.48e-13!169;UBERON:0002619!4.60e-12!22;UBERON:0000153!4.03e-11!129;UBERON:0007811!4.03e-11!129;UBERON:0000956!6.19e-11!25;UBERON:0000203!6.19e-11!25;UBERON:0003056!1.16e-10!61;UBERON:0001950!1.46e-10!20;UBERON:0000033!2.35e-10!123;UBERON:0000025!6.35e-09!194;UBERON:0003076!5.94e-07!15;UBERON:0003057!5.94e-07!15;UBERON:0000477!7.28e-07!286;UBERON:0007023!8.36e-07!115;UBERON:0004111!8.51e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.25e-08;32!UBERON:0002780;3.45e-08;41!UBERON:0001890;3.45e-08;41!UBERON:0003567;4.75e-08;2!UBERON:0003838;4.75e-08;2!UBERON:0003586;4.75e-08;2!UBERON:0005169;4.75e-08;2!UBERON:0002321;4.75e-08;2!UBERON:0005215;4.75e-08;2!UBERON:0002303;4.75e-08;2!UBERON:0002319;4.75e-08;2!UBERON:0003528;3.07e-07;34!UBERON:0002020;3.07e-07;34!UBERON:0000073;5.54e-07;53!UBERON:0002616;5.54e-07;53!UBERON:0002619;7.60e-07;22!UBERON:0002791;7.64e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.26e-11,53;UBERON:0002616,1.26e-11,53;UBERON:0001017,3.49e-11,81;UBERON:0001016,6.35e-11,89;UBERON:0001049,7.82e-11,56;UBERON:0005068,7.82e-11,56;UBERON:0006241,7.82e-11,56;UBERON:0007135,7.82e-11,56;UBERON:0002780,6.62e-10,41;UBERON:0001890,6.62e-10,41;UBERON:0003080,6.62e-10,41;UBERON:0006240,6.62e-10,41;UBERON:0000955,1.77e-09,68;UBERON:0006238,1.77e-09,68;UBERON:0001869,4.01e-09,32;UBERON:0001893,1.72e-08,34;UBERON:0003528,2.25e-08,34;UBERON:0002020,2.25e-08,34;UBERON:0003567,1.01e-07,2;UBERON:0003838,1.01e-07,2;UBERON:0003586,1.01e-07,2;UBERON:0005169,1.01e-07,2;UBERON:0002321,1.01e-07,2;UBERON:0005215,1.01e-07,2;UBERON:0002303,1.01e-07,2;UBERON:0002319,1.01e-07,2;UBERON:0002791,2.39e-07,32;UBERON:0002619,6.44e-07,22 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,2.53299878168311,0,0.522371256399677,0.245733936501509,0,0,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0.730310090387373,0,0.492484232307152,0.408001382488506,0,0,0.410623275218653,0,0,0,0,0,0,0.464448369948228,0.919421224478927,0,0,0,0,0,0,0,0,0.895661896959697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0.221729397462564,0.175669571386252,0.327447688744282,0,0,0,0,0.132957960518865,0.238490624305342,0,1.11437250398869,0,0,1.73570250803797,0,0,0.825354125820202,1.67195973229448,0,0.35576626268671,0,0.805658634218294,2.28081631715554,1.95249646038536,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.379891534993739,0.132409180813219,0,0,0,1.06748995729705,0,0.311211035399766,0.404132016209064,0.326923806226917,0,0,0,1.24864030732128,0.570471821544449,0,0,0,0,0.204154171254893,0,0.516628905878827,0,0,0,0,0,0,0.554128230968366,1.31693286264251,0,0,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0.508681776931463,0,0,0,0.609868530647977,0.530119073285941,0.348581828608555,1.14027160516907,2.01856680700503,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,2.37061319387782,0,0.984868024349589,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0.088048434013226,0,0,0,0,0,1.17217447210047,0,0,0,0,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0.301439377059586,0,0.099972991182057,0,1.00451418286425,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0.167516265334349,1.91381625495949,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0,0,0.117141414992713,0,0,0,0,0,0,0,1.37257369524342,0,0,0,0,0,0.30239029332968,0,0,0.841980283299221,0.128139149255701,0,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0.524497659837696,0,0.15403067420883,0.784349769176855,0,0.211103257785751,0,0.170093705276516,0,0,1.35473218771926,1.00337954770971,0,0,0,0,0,0,0.984043937099117,0.325378394664303,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0.460511024178389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0.632758849437452,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0.557409525377156,0,0.0711418433484141,0.159426272728822,0.59873811429845,0.191505370132367,0,0,0.561594356226918,0,0,0,1.18504244461122,0,0,0,0,0,0,0,0,0.556812347790485,0,0.270455678475983,0.33307196799782,0,0,0,0.728163130497081,0,0,0,0.296964680832639,0,0.994147647766298,0.844016498463076,0,0.494411622680279,0.422250816255987,0,0,2.26739473068848,1.43176155503017,0.615424027305347,0,0.449341755736634,0,0,0,0,0,0,0.834912883456661,0,0,0,0,1.0241410345695,0,0.236387681767936,0,0,3.81974988853243,0,0.60298219312704,0,0.552896299656123,0.295547618953547,1.97446857438575,0,0,0,0.455768223388005,0,0,0.217294743844016,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,1.30586246527318,0,0,0,0,0,0,0,0,0.404406797884062,0,2.57690890297873,0.547364367646998,0.19566461893209,0,0,0,0.30607276163049,0,0.300646838828985,0,0,0,0.313932918407225,0,0,0,0.694238953340524,0.0979923974143777,0,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.90392296312213,0,0.19871461170299,0.949661939338181,0,0,0,0.19980960958213,0.144090417154106,0,0.171594997861965,0,0.372757606696298,0.707082103850386,0,0.209205692624666,0.203996435272644,0.577901179803038,1.80126086612937,0.136905378891993,0,0.859530882839914,0,0,0.229160424011684,0,0,0,0,0,0.360299883542404,1.16495949527454,0.709048640765013,0.906574442192831,1.3480708770837,0,0,3.97614844904652,0.681017030557878,0.803765742325096,0.137539436597234,0,0,0,1.57948847310864,0.335434687599266,0.157611414598396,0.104909176269996,0,0,0,0,0,0.5085370753095,0.542999601753713,0,0,0,0.164185041498678,0,0,0,0,1.0342636508924,0.52893040697076,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0.732157589411779,0.3755727921195,2.29363678276028,0.221858103073705,0.869349641179368,0,0.124980407962107,0,0,0.235265819698172,0,0.28984205722165,0.149254802886874,0,0.554805861502613,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963099152036517,0,0,0,0,0,0,1.54400723580486,0.219284049578707,0,0,0,0,0,0.303859956177382,0.829550616910385,0,0,0,0,0.491545817507439,0.211312123358627,0.59996218756479,0,0.516644938982447,0,0.552317850755522,0,0,0.255788742607303,1.83302179374359,0.471797825567689,0.436838552768056,0,0.637724760305049,0.619678821295011,0,0,0,0,0,0,1.09189682663981,0,0.159633859057151,1.64093091392604,1.00828678488687,0.899044282034833,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| |||
|short_description=p3@SCAMP5 | |||
}} |
Latest revision as of 02:32, 19 September 2015
Short description: | p3@SCAMP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCAMP5_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000361900, ENST00000425597, NM_001178111, NM_001178112, NM_138967, NR_033660_5end |
EntrezGene: | SCAMP5 |
HGNC: | 30386 |
UniProt: | Q8TAC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pericyte cell | 2.50e-08 | 4 |
mesangial cell | 1.01e-07 | 2 |
kidney interstitial cell | 1.01e-07 | 2 |
juxtaglomerular complex cell | 1.01e-07 | 2 |
renal interstitial pericyte | 1.01e-07 | 2 |
extraglomerular mesangial cell | 1.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.26e-11 | 53 |
regional part of brain | 1.26e-11 | 53 |
central nervous system | 3.49e-11 | 81 |
nervous system | 6.35e-11 | 89 |
neural tube | 7.82e-11 | 56 |
neural rod | 7.82e-11 | 56 |
future spinal cord | 7.82e-11 | 56 |
neural keel | 7.82e-11 | 56 |
regional part of forebrain | 6.62e-10 | 41 |
forebrain | 6.62e-10 | 41 |
anterior neural tube | 6.62e-10 | 41 |
future forebrain | 6.62e-10 | 41 |
brain | 1.77e-09 | 68 |
future brain | 1.77e-09 | 68 |
cerebral hemisphere | 4.01e-09 | 32 |
telencephalon | 1.72e-08 | 34 |
brain grey matter | 2.25e-08 | 34 |
gray matter | 2.25e-08 | 34 |
abdomen connective tissue | 1.01e-07 | 2 |
abdominal segment connective tissue | 1.01e-07 | 2 |
trunk connective tissue | 1.01e-07 | 2 |
interstitial tissue | 1.01e-07 | 2 |
extraglomerular mesangium | 1.01e-07 | 2 |
kidney interstitium | 1.01e-07 | 2 |
juxtaglomerular apparatus | 1.01e-07 | 2 |
mesangium | 1.01e-07 | 2 |
regional part of telencephalon | 2.39e-07 | 32 |
regional part of cerebral cortex | 6.44e-07 | 22 |