FFCP PHASE1:Hg19::chr2:97652290..97652299,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:97652290..97652299,-
|short_description=p10@FAM178B
|description=CAGE_peak_10_at_FAM178B_5end
|association_with_transcript=1bp_to_ENST00000327896,NM_001122...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51252 | |EntrezGene=51252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28036 | |HGNC=28036 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6I6,B3KV66,E9PD86,Q8IXR5 | |UniProt=F8W6I6,B3KV66,E9PD86,Q8IXR5 | ||
|association_with_transcript=1bp_to_ENST00000327896,NM_001122646,uc002sxl.3_5end | |||
|cluster_id=chr2:97652290..97652299,- | |||
|coexpression_cluster_id=C4254 | |||
|description=CAGE_peak_10_at_FAM178B_5end | |||
|id=chr2:97652290..97652299,- | |||
|ontology_enrichment_celltype=CL:0002566!4.58e-11!1;CL:0000148!3.81e-09!10;CL:0000541!3.81e-09!10 | |||
|ontology_enrichment_celltype_v019=CL:0002566;2.37e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,4.20e-29,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.27e-26;10!UBERON:0005564;4.27e-26;10 | |||
|ontology_enrichment_disease=DOID:305!3.65e-09!106;DOID:0050687!1.05e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.15e-15;2!DOID:5409;2.26e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.15e-15,2;DOID:5409,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.39e-19!8;UBERON:0003135!2.58e-14!11;UBERON:0000997!5.05e-11!1;UBERON:0005056!5.05e-11!1;UBERON:0004176!6.92e-11!22;UBERON:0001282!9.05e-11!1;UBERON:0009842!9.05e-11!1;UBERON:0003704!9.05e-11!1;UBERON:0001171!9.05e-11!1;UBERON:0001172!9.05e-11!1;UBERON:0000991!1.40e-07!21;UBERON:0009196!1.40e-07!21;UBERON:0009117!1.40e-07!21;UBERON:0005564!1.40e-07!21;UBERON:0003101!3.06e-07!22;UBERON:0000079!3.06e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.19e-32;8!UBERON:0003135;8.34e-24;11!UBERON:0000991;7.43e-13;21!UBERON:0003101;2.64e-12;22!UBERON:0000079;2.64e-12;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.59e-32,8;UBERON:0003135,6.61e-24,11;UBERON:0000991,6.58e-13,21;UBERON:0009196,6.58e-13,21;UBERON:0009117,6.58e-13,21;UBERON:0005564,6.58e-13,21;UBERON:0004176,2.35e-12,22;UBERON:0003101,2.35e-12,22;UBERON:0000079,2.35e-12,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,1.0159663086747,0.381988425558278,0,0,0.514137463516618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721429382263803,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13837600380941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20770274853339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,2.50707539292375,1.66713136080127,1.87574891109325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,1.0159663086747,0.381988425558278,0,0,0.514137463516618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.783939179315021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721429382263803,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.13837600380941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20770274853339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,2.50707539292375,1.66713136080127,1.87574891109325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | ||
|short_description=p10@FAM178B | |||
}} | }} |
Latest revision as of 02:30, 19 September 2015
Short description: | p10@FAM178B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_FAM178B_5end |
Coexpression cluster: | C4254_melanoma_transitionalcell_testis_adenocarcinoma_small_testicular_epidermoid |
Association with transcript: | 1bp_to_ENST00000327896, NM_001122646, uc002sxl.3_5end |
EntrezGene: | FAM178B |
HGNC: | 28036 |
UniProt: | F8W6I6B3KV66E9PD86Q8IXR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 4.20e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
testis | 1.59e-32 | 8 |
male reproductive organ | 6.61e-24 | 11 |
gonad | 6.58e-13 | 21 |
indifferent external genitalia | 6.58e-13 | 21 |
indifferent gonad | 6.58e-13 | 21 |
gonad primordium | 6.58e-13 | 21 |
external genitalia | 2.35e-12 | 22 |
male organism | 2.35e-12 | 22 |
male reproductive system | 2.35e-12 | 22 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.15e-15 | 2 |
lung small cell carcinoma | 2.26e-08 | 4 |