FFCP PHASE1:Hg19::chr4:84457628..84457666,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:84457628..84457666,+
|short_description=p3@AGPAT9
|description=CAGE_peak_3_at_AGPAT9_5end
|association_with_transcript=0bp_to_NM_032717,uc003hoy.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84803 | |EntrezGene=84803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28157 | |HGNC=28157 | ||
|TSSclassifier=strong | |||
|UniProt=Q53EU6 | |UniProt=Q53EU6 | ||
|association_with_transcript=0bp_to_NM_032717,uc003hoy.2_5end | |||
|cluster_id=chr4:84457628..84457666,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_3_at_AGPAT9_5end | |||
|id=chr4:84457628..84457666,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.38e-28!76;CL:0002057!9.14e-24!42;CL:0000557!1.15e-23!71;CL:0000839!2.96e-23!70;CL:0000763!1.66e-22!112;CL:0000049!1.66e-22!112;CL:0002009!1.63e-21!65;CL:0000860!4.59e-21!45;CL:0002194!3.20e-20!63;CL:0000576!3.20e-20!63;CL:0000040!3.20e-20!63;CL:0000559!3.20e-20!63;CL:0000738!3.28e-18!140;CL:0000037!1.16e-15!172;CL:0000566!1.16e-15!172;CL:0002032!8.69e-15!165;CL:0000837!8.69e-15!165;CL:0002031!4.23e-14!124;CL:0000988!9.28e-14!182;CL:0002087!1.59e-11!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-21;33!CL:0002057;1.27e-21;33!CL:0000473;3.42e-21;39!CL:0000234;3.42e-21;39!CL:0000766;9.46e-18;69!CL:0000576;1.31e-15;48!CL:0000763;4.30e-09;100!CL:0000094;3.97e-08;8!CL:0000738;6.54e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.85e-40,72;CL:0000557,2.36e-34,67;CL:0000473,1.16e-33,48;CL:0000234,1.16e-33,48;CL:0000839,1.14e-32,66;CL:0000763,1.13e-31,108;CL:0000049,1.13e-31,108;CL:0002009,4.37e-31,61;CL:0000860,3.04e-30,42;CL:0002057,3.04e-30,42;CL:0002194,2.48e-29,59;CL:0000576,2.48e-29,59;CL:0000040,2.48e-29,59;CL:0000559,2.48e-29,59;CL:0000738,3.45e-27,136;CL:0000037,6.08e-24,168;CL:0002032,1.19e-22,161;CL:0000837,1.19e-22,161;CL:0002031,3.23e-21,120;CL:0000988,3.64e-21,177;CL:0002087,3.35e-18,115;CL:0000094,3.93e-08,8;CL:0002393,7.04e-08,9;CL:0002397,7.04e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;5.14e-22;42!CL:0000049;2.28e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.02e-24!102;UBERON:0003061!5.02e-24!102;UBERON:0002193!1.41e-22!112;UBERON:0002371!2.01e-20!80;UBERON:0001474!5.44e-18!86;UBERON:0003081!2.87e-16!216;UBERON:0002405!1.24e-13!115;UBERON:0004765!1.91e-12!101;UBERON:0001434!1.91e-12!101;UBERON:0007023!3.41e-10!115;UBERON:0002204!2.11e-07!167;UBERON:0000926!5.05e-07!448;UBERON:0004120!5.05e-07!448;UBERON:0006603!5.05e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.50e-07;15!UBERON:0000179;1.50e-07;15!UBERON:0000463;1.50e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.31e-34,98;UBERON:0003061,1.31e-34,98;UBERON:0002193,2.99e-30,108;UBERON:0002371,8.08e-30,76;UBERON:0001474,1.99e-26,82;UBERON:0002405,8.82e-24,93;UBERON:0004765,2.29e-22,90;UBERON:0003081,1.79e-20,203;UBERON:0001434,1.64e-17,100;UBERON:0000926,1.75e-09,315;UBERON:0004120,1.75e-09,315;UBERON:0006603,1.75e-09,315;UBERON:0000178,1.60e-07,15;UBERON:0000179,1.60e-07,15;UBERON:0000463,1.60e-07,15;UBERON:0007023,2.91e-07,114;UBERON:0002204,9.19e-07,167 | |||
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| ||
|short_description=p3@AGPAT9 | |||
}} | }} |
Latest revision as of 02:26, 19 September 2015
Short description: | p3@AGPAT9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AGPAT9_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 0bp_to_NM_032717, uc003hoy.2_5end |
EntrezGene: | AGPAT9 |
HGNC: | 28157 |
UniProt: | Q53EU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.85e-40 | 72 |
granulocyte monocyte progenitor cell | 2.36e-34 | 67 |
defensive cell | 1.16e-33 | 48 |
phagocyte | 1.16e-33 | 48 |
myeloid lineage restricted progenitor cell | 1.14e-32 | 66 |
myeloid cell | 1.13e-31 | 108 |
common myeloid progenitor | 1.13e-31 | 108 |
macrophage dendritic cell progenitor | 4.37e-31 | 61 |
classical monocyte | 3.04e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.04e-30 | 42 |
monopoietic cell | 2.48e-29 | 59 |
monocyte | 2.48e-29 | 59 |
monoblast | 2.48e-29 | 59 |
promonocyte | 2.48e-29 | 59 |
leukocyte | 3.45e-27 | 136 |
hematopoietic stem cell | 6.08e-24 | 168 |
hematopoietic oligopotent progenitor cell | 1.19e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.19e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 3.23e-21 | 120 |
hematopoietic cell | 3.64e-21 | 177 |
nongranular leukocyte | 3.35e-18 | 115 |
granulocyte | 3.93e-08 | 8 |
intermediate monocyte | 7.04e-08 | 9 |
CD14-positive, CD16-positive monocyte | 7.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.31e-34 | 98 |
blood island | 1.31e-34 | 98 |
hemolymphoid system | 2.99e-30 | 108 |
bone marrow | 8.08e-30 | 76 |
bone element | 1.99e-26 | 82 |
immune system | 8.82e-24 | 93 |
skeletal element | 2.29e-22 | 90 |
lateral plate mesoderm | 1.79e-20 | 203 |
skeletal system | 1.64e-17 | 100 |
mesoderm | 1.75e-09 | 315 |
mesoderm-derived structure | 1.75e-09 | 315 |
presumptive mesoderm | 1.75e-09 | 315 |
blood | 1.60e-07 | 15 |
haemolymphatic fluid | 1.60e-07 | 15 |
organism substance | 1.60e-07 | 15 |
adult organism | 2.91e-07 | 114 |
musculoskeletal system | 9.19e-07 | 167 |