FFCP PHASE1:Hg19::chr12:53689319..53689349,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5204 | |EntrezGene=5204 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8869 | |HGNC=8869 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C084,Q99471,F8VNW6 | |UniProt=Q9C084,Q99471,F8VNW6 | ||
|association_with_transcript=0bp_to_ENST00000243040,ENST00000334478,ENST00000547130,ENST00000549995,ENST00000550513,ENST00000550846,ENST00000551223,ENST00000552341,ENST00000552742_5end | |association_with_transcript=0bp_to_ENST00000243040,ENST00000334478,ENST00000547130,ENST00000549995,ENST00000550513,ENST00000550846,ENST00000551223,ENST00000552341,ENST00000552742_5end | ||
|cluster_id=chr12:53689319..53689349,+ | |||
|coexpression_cluster_id=C2215 | |coexpression_cluster_id=C2215 | ||
|description=CAGE_peak_1_at_PFDN5_5end | |description=CAGE_peak_1_at_PFDN5_5end | ||
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|ontology_enrichment_celltype=CL:0000738!4.70e-27!140;CL:0002031!2.89e-26!124;CL:0002087!4.50e-25!119;CL:0002057!5.17e-24!42;CL:0000048!1.16e-22!430;CL:0000034!6.30e-22!444;CL:0000860!8.89e-21!45;CL:0000723!1.10e-20!436;CL:0002009!2.26e-20!65;CL:0000839!5.00e-20!70;CL:0000037!7.46e-20!172;CL:0000566!7.46e-20!172;CL:0002194!1.90e-19!63;CL:0000576!1.90e-19!63;CL:0000040!1.90e-19!63;CL:0000559!1.90e-19!63;CL:0002320!1.91e-19!365;CL:0000557!2.50e-19!71;CL:0000766!7.54e-19!76;CL:0000134!2.02e-18!358;CL:0002032!4.11e-18!165;CL:0000837!4.11e-18!165;CL:0000988!2.94e-17!182;CL:0000219!3.74e-12!390;CL:0000763!5.37e-12!112;CL:0000049!5.37e-12!112;CL:0000791!8.15e-09!18;CL:0000789!8.15e-09!18;CL:0002420!8.15e-09!18;CL:0002419!8.15e-09!18;CL:0000790!8.15e-09!18;CL:0000625!3.60e-07!11;CL:0000003!3.65e-07!722;CL:0000236!7.92e-07!14 | |ontology_enrichment_celltype=CL:0000738!4.70e-27!140;CL:0002031!2.89e-26!124;CL:0002087!4.50e-25!119;CL:0002057!5.17e-24!42;CL:0000048!1.16e-22!430;CL:0000034!6.30e-22!444;CL:0000860!8.89e-21!45;CL:0000723!1.10e-20!436;CL:0002009!2.26e-20!65;CL:0000839!5.00e-20!70;CL:0000037!7.46e-20!172;CL:0000566!7.46e-20!172;CL:0002194!1.90e-19!63;CL:0000576!1.90e-19!63;CL:0000040!1.90e-19!63;CL:0000559!1.90e-19!63;CL:0002320!1.91e-19!365;CL:0000557!2.50e-19!71;CL:0000766!7.54e-19!76;CL:0000134!2.02e-18!358;CL:0002032!4.11e-18!165;CL:0000837!4.11e-18!165;CL:0000988!2.94e-17!182;CL:0000219!3.74e-12!390;CL:0000763!5.37e-12!112;CL:0000049!5.37e-12!112;CL:0000791!8.15e-09!18;CL:0000789!8.15e-09!18;CL:0002420!8.15e-09!18;CL:0002419!8.15e-09!18;CL:0000790!8.15e-09!18;CL:0000625!3.60e-07!11;CL:0000003!3.65e-07!722;CL:0000236!7.92e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.86e-17;33!CL:0002057;2.86e-17;33!CL:0000473;3.81e-15;39!CL:0000234;3.81e-15;39!CL:0000576;5.80e-14;48!CL:0000766;6.91e-10;69!CL:0000791;8.13e-09;18!CL:0000789;8.13e-09;18!CL:0002419;8.13e-09;18!CL:0002087;2.52e-08;104!CL:0000625;3.58e-07;11!CL:0000236;4.45e-07;13!CL:0000738;8.99e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;2.86e-17;33!CL:0002057;2.86e-17;33!CL:0000473;3.81e-15;39!CL:0000234;3.81e-15;39!CL:0000576;5.80e-14;48!CL:0000766;6.91e-10;69!CL:0000791;8.13e-09;18!CL:0000789;8.13e-09;18!CL:0002419;8.13e-09;18!CL:0002087;2.52e-08;104!CL:0000625;3.58e-07;11!CL:0000236;4.45e-07;13!CL:0000738;8.99e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.02e-28,136;CL:0002031,4.76e-28,120;CL:0002087,7.51e-27,115;CL:0000473,8.42e-25,48;CL:0000234,8.42e-25,48;CL:0000860,5.17e-24,42;CL:0002057,5.17e-24,42;CL:0000048,8.15e-24,427;CL:0000034,4.74e-23,441;CL:0002009,8.41e-23,61;CL:0000839,2.75e-22,66;CL:0002194,7.54e-22,59;CL:0000576,7.54e-22,59;CL:0000040,7.54e-22,59;CL:0000559,7.54e-22,59;CL:0000723,8.84e-22,433;CL:0000557,1.68e-21,67;CL:0000037,5.22e-21,168;CL:0000766,7.18e-21,72;CL:0002320,2.37e-20,361;CL:0000134,2.62e-19,354;CL:0002032,3.16e-19,161;CL:0000837,3.16e-19,161;CL:0000988,2.06e-18,177;CL:0000763,4.43e-13,108;CL:0000049,4.43e-13,108;CL:0000219,7.95e-13,386;CL:0000791,8.15e-09,18;CL:0000789,8.15e-09,18;CL:0002420,8.15e-09,18;CL:0002419,8.15e-09,18;CL:0000790,8.15e-09,18;CL:0000625,3.60e-07,11;CL:0000236,7.92e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.92e-17;42!CL:0000790;8.13e-09;18 | |ontology_enrichment_development_v019=CL:0002057;1.92e-17;42!CL:0000790;8.13e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.61e-19!102;UBERON:0003061!2.61e-19!102;UBERON:0002371!1.96e-18!80;UBERON:0002384!8.90e-18!375;UBERON:0002193!9.20e-18!112;UBERON:0002204!2.26e-16!167;UBERON:0001474!3.14e-15!86;UBERON:0004765!5.82e-15!101;UBERON:0001434!5.82e-15!101;UBERON:0003081!3.59e-13!216;UBERON:0002405!1.22e-09!115 | |ontology_enrichment_uberon=UBERON:0002390!2.61e-19!102;UBERON:0003061!2.61e-19!102;UBERON:0002371!1.96e-18!80;UBERON:0002384!8.90e-18!375;UBERON:0002193!9.20e-18!112;UBERON:0002204!2.26e-16!167;UBERON:0001474!3.14e-15!86;UBERON:0004765!5.82e-15!101;UBERON:0001434!5.82e-15!101;UBERON:0003081!3.59e-13!216;UBERON:0002405!1.22e-09!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.91e-21,98;UBERON:0003061,5.91e-21,98;UBERON:0002371,2.42e-20,76;UBERON:0002193,3.31e-19,108;UBERON:0002384,1.25e-18,371;UBERON:0002204,2.79e-18,167;UBERON:0004765,2.98e-18,90;UBERON:0001434,5.01e-17,100;UBERON:0001474,8.57e-17,82;UBERON:0003081,4.05e-16,203;UBERON:0002405,1.16e-15,93;UBERON:0000926,1.91e-14,315;UBERON:0004120,1.91e-14,315;UBERON:0006603,1.91e-14,315 | |||
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| ||
|short_description=p1@PFDN5 | |short_description=p1@PFDN5 | ||
}} | }} |
Latest revision as of 02:25, 19 September 2015
Short description: | p1@PFDN5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PFDN5_5end |
Coexpression cluster: | C2215_CD14CD16_CD4_CD8_CD19_CD14_Basophils_Whole |
Association with transcript: | 0bp_to_ENST00000243040, ENST00000334478, ENST00000547130, ENST00000549995, ENST00000550513, ENST00000550846, ENST00000551223, ENST00000552341, ENST00000552742_5end |
EntrezGene: | PFDN5 |
HGNC: | 8869 |
UniProt: | Q9C084Q99471F8VNW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.91e-21 | 98 |
blood island | 5.91e-21 | 98 |
bone marrow | 2.42e-20 | 76 |
hemolymphoid system | 3.31e-19 | 108 |
connective tissue | 1.25e-18 | 371 |
musculoskeletal system | 2.79e-18 | 167 |
skeletal element | 2.98e-18 | 90 |
skeletal system | 5.01e-17 | 100 |
bone element | 8.57e-17 | 82 |
lateral plate mesoderm | 4.05e-16 | 203 |
immune system | 1.16e-15 | 93 |
mesoderm | 1.91e-14 | 315 |
mesoderm-derived structure | 1.91e-14 | 315 |
presumptive mesoderm | 1.91e-14 | 315 |