FFCP PHASE1:Hg19::chr11:64014165..64014186,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:64014165..64014186,- to FFCP PHASE1:Hg19::chr11:64014165..64014186,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26472 | |EntrezGene=26472 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9057 | |HGNC=9057 | ||
|TSSclassifier=strong | |||
|UniProt=Q96C90 | |UniProt=Q96C90 | ||
|association_with_transcript=226bp_to_ENST00000309318,NM_138689,uc001nza.2_5end | |||
|cluster_id=chr11:64014165..64014186,- | |||
|description=CAGE_peak_2_at_PPP1R14B_5end | |||
|id=chr11:64014165..64014186,- | |||
|ontology_enrichment_celltype=CL:0000548!5.91e-26!679;CL:0000004!5.91e-26!679;CL:0000255!5.91e-26!679;CL:0000012!2.45e-25!682;CL:0000220!5.43e-18!246;CL:0000066!3.33e-17!254;CL:0002321!4.48e-17!248;CL:0002371!1.23e-16!591;CL:0000144!4.06e-15!625;CL:0000055!2.70e-12!180;CL:0000222!2.74e-12!119;CL:0000003!7.98e-12!722;CL:0000063!2.85e-10!578;CL:0000183!4.84e-10!59;CL:0000076!1.79e-09!62;CL:0000680!2.90e-09!57;CL:0000056!2.90e-09!57;CL:0000355!2.90e-09!57;CL:0000187!6.46e-09!54;CL:0000192!7.50e-08!42;CL:0000514!7.50e-08!42;CL:0000393!4.58e-07!60;CL:0000211!4.58e-07!60;CL:0002076!5.14e-07!43;CL:0000359!6.26e-07!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.12e-17,253;CL:0002321,2.24e-17,250;CL:0000222,1.94e-12,121;CL:0000076,7.75e-10,63;CL:0000680,4.34e-09,58;CL:0000056,4.34e-09,58;CL:0000355,4.34e-09,58;CL:0000187,9.76e-09,55;CL:0000192,1.19e-07,43;CL:0000514,1.19e-07,43;CL:0000393,5.37e-07,61;CL:0000211,5.37e-07,61;CL:0000359,5.94e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!1.48e-13!82;UBERON:0003104!5.72e-13!238;UBERON:0009142!5.72e-13!238;UBERON:0002100!2.93e-12!216;UBERON:0004290!3.08e-12!70;UBERON:0000914!6.05e-12!83;UBERON:0002329!6.05e-12!83;UBERON:0003077!6.05e-12!83;UBERON:0003059!6.05e-12!83;UBERON:0007282!6.05e-12!83;UBERON:0009618!6.05e-12!83;UBERON:0007285!6.05e-12!83;UBERON:0001134!8.26e-11!61;UBERON:0002036!8.26e-11!61;UBERON:0003082!8.26e-11!61;UBERON:0002385!1.41e-09!63;UBERON:0001015!1.41e-09!63;UBERON:0000383!1.41e-09!63;UBERON:0005256!5.51e-09!143;UBERON:0001981!8.37e-09!60;UBERON:0007500!8.37e-09!60;UBERON:0004537!8.37e-09!60;UBERON:0006965!8.37e-09!60;UBERON:0000055!1.09e-08!69;UBERON:0004872!1.60e-08!84;UBERON:0001637!1.95e-08!42;UBERON:0003509!1.95e-08!42;UBERON:0004572!1.95e-08!42;UBERON:0000490!5.06e-08!138;UBERON:0002049!6.68e-08!79;UBERON:0007798!6.68e-08!79;UBERON:0001004!4.39e-07!72;UBERON:0003102!5.34e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.19e-14,78;UBERON:0000486,2.18e-13,83;UBERON:0002100,2.37e-12,199;UBERON:0002329,4.70e-12,71;UBERON:0003059,4.70e-12,71;UBERON:0007282,4.70e-12,71;UBERON:0004290,4.70e-12,71;UBERON:0009618,4.70e-12,71;UBERON:0007524,1.98e-11,73;UBERON:0003077,2.15e-11,72;UBERON:0007285,2.15e-11,72;UBERON:0001134,1.27e-10,62;UBERON:0002036,1.27e-10,62;UBERON:0003082,1.27e-10,62;UBERON:0002385,2.38e-09,64;UBERON:0001015,2.38e-09,64;UBERON:0000383,2.38e-09,64;UBERON:0000490,2.65e-09,148;UBERON:0007500,7.87e-09,59;UBERON:0001981,7.87e-09,59;UBERON:0004537,7.87e-09,59;UBERON:0006965,7.87e-09,59;UBERON:0000055,1.05e-08,68;UBERON:0001637,1.82e-08,42;UBERON:0003509,1.82e-08,42;UBERON:0004572,1.82e-08,42;UBERON:0004872,1.85e-08,83;UBERON:0003104,6.42e-08,160;UBERON:0009142,6.42e-08,160;UBERON:0002049,6.63e-08,78;UBERON:0007798,6.63e-08,78;UBERON:0005256,6.89e-08,122;UBERON:0003102,9.68e-08,99;UBERON:0001004,4.33e-07,74 | |||
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| ||
|short_description=p2@PPP1R14B | |||
}} | }} |
Latest revision as of 02:10, 19 September 2015
Short description: | p2@PPP1R14B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPP1R14B_5end |
Coexpression cluster: | NA |
Association with transcript: | 226bp_to_ENST00000309318, NM_138689, uc001nza.2_5end |
EntrezGene: | PPP1R14B |
HGNC: | 9057 |
UniProt: | Q96C90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.12e-17 | 253 |
embryonic cell | 2.24e-17 | 250 |
mesodermal cell | 1.94e-12 | 121 |
squamous epithelial cell | 7.75e-10 | 63 |
muscle precursor cell | 4.34e-09 | 58 |
myoblast | 4.34e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.34e-09 | 58 |
muscle cell | 9.76e-09 | 55 |
smooth muscle cell | 1.19e-07 | 43 |
smooth muscle myoblast | 1.19e-07 | 43 |
electrically responsive cell | 5.37e-07 | 61 |
electrically active cell | 5.37e-07 | 61 |
vascular associated smooth muscle cell | 5.94e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.19e-14 | 78 |
multilaminar epithelium | 2.18e-13 | 83 |
trunk | 2.37e-12 | 199 |
somite | 4.70e-12 | 71 |
presomitic mesoderm | 4.70e-12 | 71 |
presumptive segmental plate | 4.70e-12 | 71 |
dermomyotome | 4.70e-12 | 71 |
trunk paraxial mesoderm | 4.70e-12 | 71 |
dense mesenchyme tissue | 1.98e-11 | 73 |
paraxial mesoderm | 2.15e-11 | 72 |
presumptive paraxial mesoderm | 2.15e-11 | 72 |
skeletal muscle tissue | 1.27e-10 | 62 |
striated muscle tissue | 1.27e-10 | 62 |
myotome | 1.27e-10 | 62 |
muscle tissue | 2.38e-09 | 64 |
musculature | 2.38e-09 | 64 |
musculature of body | 2.38e-09 | 64 |
unilaminar epithelium | 2.65e-09 | 148 |
epithelial tube open at both ends | 7.87e-09 | 59 |
blood vessel | 7.87e-09 | 59 |
blood vasculature | 7.87e-09 | 59 |
vascular cord | 7.87e-09 | 59 |
vessel | 1.05e-08 | 68 |
artery | 1.82e-08 | 42 |
arterial blood vessel | 1.82e-08 | 42 |
arterial system | 1.82e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 1.85e-08 | 83 |
mesenchyme | 6.42e-08 | 160 |
entire embryonic mesenchyme | 6.42e-08 | 160 |
vasculature | 6.63e-08 | 78 |
vascular system | 6.63e-08 | 78 |
trunk mesenchyme | 6.89e-08 | 122 |
surface structure | 9.68e-08 | 99 |
respiratory system | 4.33e-07 | 74 |