FFCP PHASE1:Hg19::chr2:97561300..97561311,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51252 | |EntrezGene=51252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28036 | |HGNC=28036 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IXR5 | |UniProt=Q8IXR5 | ||
|association_with_transcript=-401bp_to_ENST00000494172,NM_001172667_5end | |association_with_transcript=-401bp_to_ENST00000494172,NM_001172667_5end | ||
|cluster_id=chr2:97561300..97561311,- | |||
|description=CAGE_peak_7_at_FAM178B_5end | |description=CAGE_peak_7_at_FAM178B_5end | ||
|id=chr2:97561300..97561311,- | |id=chr2:97561300..97561311,- | ||
|ontology_enrichment_celltype=CL:0000188!8.57e-09!9;CL:0000082!3.68e-07!19 | |ontology_enrichment_celltype=CL:0000188!8.57e-09!9;CL:0000082!3.68e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0002553;3.25e-19;1!CL:0000082;3.62e-09;19!CL:0000188;4.80e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,2.71e-19,1;CL:0000082,3.62e-09,19;CL:0000188,4.43e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0001041;6.14e-10;30 | |||
|ontology_enrichment_disease=DOID:1324!2.33e-09!15;DOID:0050615!1.05e-08!16;DOID:1325!2.01e-07!7;DOID:3904!2.01e-07!7 | |ontology_enrichment_disease=DOID:1324!2.33e-09!15;DOID:0050615!1.05e-08!16;DOID:1325!2.01e-07!7;DOID:3904!2.01e-07!7 | ||
|ontology_enrichment_disease_v019=DOID:1324;1.89e-11;15!DOID:0050615;8.97e-11;16 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,1.89e-11,15;DOID:0050615,8.97e-11,16 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.74e-34!57;UBERON:0005068!8.74e-34!57;UBERON:0006241!8.74e-34!57;UBERON:0007135!8.74e-34!57;UBERON:0002616!5.79e-30!59;UBERON:0002780!1.10e-26!41;UBERON:0001890!1.10e-26!41;UBERON:0006240!1.10e-26!41;UBERON:0001893!1.90e-26!34;UBERON:0000955!2.93e-26!69;UBERON:0006238!2.93e-26!69;UBERON:0002020!3.27e-26!34;UBERON:0003528!3.27e-26!34;UBERON:0003080!6.25e-26!42;UBERON:0002791!2.19e-24!33;UBERON:0001017!9.19e-23!82;UBERON:0002619!1.39e-22!22;UBERON:0001869!5.34e-22!32;UBERON:0005743!2.24e-21!86;UBERON:0007023!3.90e-20!115;UBERON:0003075!5.35e-20!86;UBERON:0007284!5.35e-20!86;UBERON:0000956!1.42e-19!25;UBERON:0000203!1.42e-19!25;UBERON:0002346!8.55e-19!90;UBERON:0000073!1.11e-18!94;UBERON:0001016!1.11e-18!94;UBERON:0001950!3.20e-18!20;UBERON:0002298!4.18e-18!8;UBERON:0003056!2.84e-16!61;UBERON:0000025!5.66e-13!194;UBERON:0000033!7.03e-13!123;UBERON:0000200!2.58e-12!6;UBERON:0000153!5.86e-12!129;UBERON:0007811!5.86e-12!129;UBERON:0006331!5.57e-10!3;UBERON:0001896!6.49e-10!3;UBERON:0005290!6.49e-10!3;UBERON:0010096!6.49e-10!3;UBERON:0000988!1.19e-09!3;UBERON:0002771!1.55e-09!3;UBERON:0000349!2.30e-09!5;UBERON:0001871!3.56e-09!7;UBERON:0000483!4.91e-09!309;UBERON:0003076!6.44e-09!15;UBERON:0003057!6.44e-09!15;UBERON:0000119!7.55e-09!312;UBERON:0004111!1.10e-08!241;UBERON:0000064!1.28e-08!219;UBERON:0004733!1.43e-08!12;UBERON:0002028!1.43e-08!12;UBERON:0007277!1.43e-08!12;UBERON:0000477!2.75e-08!286;UBERON:0004121!3.63e-08!169;UBERON:0002308!4.61e-08!9;UBERON:0000125!4.61e-08!9;UBERON:0004732!7.41e-08!13;UBERON:0000924!7.98e-08!173;UBERON:0006601!7.98e-08!173;UBERON:0000475!3.14e-07!365;UBERON:0004802!3.68e-07!19;UBERON:0000115!3.68e-07!19;UBERON:0001954!5.34e-07!2;UBERON:0003022!5.34e-07!2;UBERON:0002421!5.34e-07!2;UBERON:0002600!5.34e-07!2;UBERON:0002148!5.85e-07!2;UBERON:0009662!5.85e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!8.74e-34!57;UBERON:0005068!8.74e-34!57;UBERON:0006241!8.74e-34!57;UBERON:0007135!8.74e-34!57;UBERON:0002616!5.79e-30!59;UBERON:0002780!1.10e-26!41;UBERON:0001890!1.10e-26!41;UBERON:0006240!1.10e-26!41;UBERON:0001893!1.90e-26!34;UBERON:0000955!2.93e-26!69;UBERON:0006238!2.93e-26!69;UBERON:0002020!3.27e-26!34;UBERON:0003528!3.27e-26!34;UBERON:0003080!6.25e-26!42;UBERON:0002791!2.19e-24!33;UBERON:0001017!9.19e-23!82;UBERON:0002619!1.39e-22!22;UBERON:0001869!5.34e-22!32;UBERON:0005743!2.24e-21!86;UBERON:0007023!3.90e-20!115;UBERON:0003075!5.35e-20!86;UBERON:0007284!5.35e-20!86;UBERON:0000956!1.42e-19!25;UBERON:0000203!1.42e-19!25;UBERON:0002346!8.55e-19!90;UBERON:0000073!1.11e-18!94;UBERON:0001016!1.11e-18!94;UBERON:0001950!3.20e-18!20;UBERON:0002298!4.18e-18!8;UBERON:0003056!2.84e-16!61;UBERON:0000025!5.66e-13!194;UBERON:0000033!7.03e-13!123;UBERON:0000200!2.58e-12!6;UBERON:0000153!5.86e-12!129;UBERON:0007811!5.86e-12!129;UBERON:0006331!5.57e-10!3;UBERON:0001896!6.49e-10!3;UBERON:0005290!6.49e-10!3;UBERON:0010096!6.49e-10!3;UBERON:0000988!1.19e-09!3;UBERON:0002771!1.55e-09!3;UBERON:0000349!2.30e-09!5;UBERON:0001871!3.56e-09!7;UBERON:0000483!4.91e-09!309;UBERON:0003076!6.44e-09!15;UBERON:0003057!6.44e-09!15;UBERON:0000119!7.55e-09!312;UBERON:0004111!1.10e-08!241;UBERON:0000064!1.28e-08!219;UBERON:0004733!1.43e-08!12;UBERON:0002028!1.43e-08!12;UBERON:0007277!1.43e-08!12;UBERON:0000477!2.75e-08!286;UBERON:0004121!3.63e-08!169;UBERON:0002308!4.61e-08!9;UBERON:0000125!4.61e-08!9;UBERON:0004732!7.41e-08!13;UBERON:0000924!7.98e-08!173;UBERON:0006601!7.98e-08!173;UBERON:0000475!3.14e-07!365;UBERON:0004802!3.68e-07!19;UBERON:0000115!3.68e-07!19;UBERON:0001954!5.34e-07!2;UBERON:0003022!5.34e-07!2;UBERON:0002421!5.34e-07!2;UBERON:0002600!5.34e-07!2;UBERON:0002148!5.85e-07!2;UBERON:0009662!5.85e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002336;3.25e-19;1!UBERON:0002038;3.25e-19;1!UBERON:0011215;3.25e-19;1!UBERON:0001018;3.25e-19;1!UBERON:0009661;3.25e-19;1!UBERON:0002950;3.25e-19;1!UBERON:0002473;3.25e-19;1!UBERON:0005340;3.25e-19;1!UBERON:0003544;3.25e-19;1!UBERON:0005970;3.25e-19;1!UBERON:0002316;3.25e-19;1!UBERON:0001020;3.25e-19;1!UBERON:0001891;3.25e-19;1!UBERON:0002437;3.25e-19;1!UBERON:0001897;2.72e-10;2!UBERON:0005162;2.72e-10;2!UBERON:0000122;2.72e-10;2!UBERON:0010225;2.72e-10;2!UBERON:0004802;3.62e-09;19!UBERON:0000115;3.62e-09;19!UBERON:0002048;5.39e-08;22!UBERON:0004807;5.39e-08;22!UBERON:0000117;5.39e-08;22!UBERON:0000171;5.39e-08;22!UBERON:0000170;5.39e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,1.88e-19,1;UBERON:0011215,1.88e-19,1;UBERON:0001018,1.88e-19,1;UBERON:0002473,1.88e-19,1;UBERON:0005340,1.88e-19,1;UBERON:0003544,1.88e-19,1;UBERON:0005970,1.88e-19,1;UBERON:0002316,1.88e-19,1;UBERON:0001020,1.88e-19,1;UBERON:0002437,1.88e-19,1;UBERON:0002038,5.62e-19,1;UBERON:0009661,5.62e-19,1;UBERON:0002950,5.62e-19,1;UBERON:0001891,5.62e-19,1;UBERON:0009616,5.62e-19,1;UBERON:0010286,5.62e-19,1;UBERON:0005162,2.07e-10,2;UBERON:0000122,2.07e-10,2;UBERON:0001897,2.72e-10,2;UBERON:0010225,2.72e-10,2;UBERON:0004802,3.62e-09,19;UBERON:0000115,3.62e-09,19;UBERON:0002048,5.39e-08,22;UBERON:0000117,5.39e-08,22;UBERON:0000171,5.39e-08,22;UBERON:0000170,5.39e-08,22;UBERON:0005597,5.39e-08,22;UBERON:0000118,5.39e-08,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25572963234866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02366961824612,0,0.307007349452259,0.689182862422653,0,0,0.681813019328807,1.86967274858148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0.520855522170466,0,0,0,0.762760950878299,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0.476809736941136,0,0,0,0,0,0,0,0,0,0,1.88723172345896,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.50648636764703,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.79339561045614,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0.573409195690071,0.332787154610557,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0.0642292250964595,0,0,0.615349092722265,0,0.691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.405225507710368,0,0.206686796501184,0.697573912132975,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0.40781839786099,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,2.56636834063345,0,0,5.17349025997675,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,1.29005624836306,0,0.815897882290976,0,0,0,0,0,0,0,0,0.101988829741982,0,0.643264296743914,0,0,0,0,1.44806194206653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25572963234866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.02366961824612,0,0.307007349452259,0.689182862422653,0,0,0.681813019328807,1.86967274858148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.371072392647405,0,0.520855522170466,0,0,0,0.762760950878299,0.945550727071745,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0.189753732724185,0.476809736941136,0,0,0,0,0,0,0,0,0,0,1.88723172345896,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0.50648636764703,0.977756913674015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.485996453264197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.79339561045614,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.250381861413,0.573409195690071,0.332787154610557,0.683060432355218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0.0642292250964595,0,0,0.615349092722265,0,0.691572524642179,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0.405225507710368,0,0.206686796501184,0.697573912132975,0,0,0,0,0,0,0,0,0,0.532214220975833,0,0,0.40781839786099,0.394636641377094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,2.56636834063345,0,0,5.17349025997675,0,0.235676547101626,0.196308467114945,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,1.29005624836306,0,0.815897882290976,0,0,0,0,0,0,0,0,0.101988829741982,0,0.643264296743914,0,0,0,0,1.44806194206653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p7@FAM178B | |short_description=p7@FAM178B | ||
}} | }} |
Latest revision as of 02:10, 19 September 2015
Short description: | p7@FAM178B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_FAM178B_5end |
Coexpression cluster: | NA |
Association with transcript: | -401bp_to_ENST00000494172, NM_001172667_5end |
EntrezGene: | FAM178B |
HGNC: | 28036 |
UniProt: | Q8IXR5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 2.71e-19 | 1 |
epithelial cell of lung | 3.62e-09 | 19 |
cell of skeletal muscle | 4.43e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 1.88e-19 | 1 |
central nervous system cell part cluster | 1.88e-19 | 1 |
axon tract | 1.88e-19 | 1 |
intercerebral commissure | 1.88e-19 | 1 |
dorsal telencephalic commissure | 1.88e-19 | 1 |
brain white matter | 1.88e-19 | 1 |
brain commissure | 1.88e-19 | 1 |
white matter | 1.88e-19 | 1 |
nervous system commissure | 1.88e-19 | 1 |
cerebral hemisphere white matter | 1.88e-19 | 1 |
substantia nigra | 5.62e-19 | 1 |
midbrain nucleus | 5.62e-19 | 1 |
regional part of midbrain | 5.62e-19 | 1 |
midbrain | 5.62e-19 | 1 |
presumptive midbrain | 5.62e-19 | 1 |
midbrain neural tube | 5.62e-19 | 1 |
multi cell component structure | 2.07e-10 | 2 |
neuron projection bundle | 2.07e-10 | 2 |
dorsal plus ventral thalamus | 2.72e-10 | 2 |
thalamic complex | 2.72e-10 | 2 |
respiratory tract epithelium | 3.62e-09 | 19 |
lung epithelium | 3.62e-09 | 19 |
lung | 5.39e-08 | 22 |
respiratory tube | 5.39e-08 | 22 |
respiration organ | 5.39e-08 | 22 |
pair of lungs | 5.39e-08 | 22 |
lung primordium | 5.39e-08 | 22 |
lung bud | 5.39e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 1.89e-11 | 15 |
respiratory system cancer | 8.97e-11 | 16 |