FFCP PHASE1:Hg19::chr12:53574418..53574448,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51380 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18966 | |||
|TSSclassifier=strong | |||
|UniProt=E9PFW9,Q9Y600 | |||
|association_with_transcript=0bp_to_ENST00000379843,ENST00000437073,ENST00000453446,NM_015989,uc001sby.2,uc001sca.3,uc010snx.1_5end | |||
|cluster_id=chr12:53574418..53574448,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_CSAD_5end | |||
|id=chr12:53574418..53574448,- | |||
|ontology_enrichment_celltype=CL:0002057!6.06e-16!42;CL:0000766!9.65e-16!76;CL:0000860!1.47e-13!45;CL:0000557!2.78e-13!71;CL:0000738!4.55e-13!140;CL:0002009!7.51e-12!65;CL:0000839!1.27e-11!70;CL:0002194!4.93e-11!63;CL:0000576!4.93e-11!63;CL:0000040!4.93e-11!63;CL:0000559!4.93e-11!63;CL:0000763!4.50e-10!112;CL:0000049!4.50e-10!112;CL:0002031!3.66e-09!124;CL:0000037!6.21e-09!172;CL:0000566!6.21e-09!172;CL:0002087!1.98e-08!119;CL:0002032!3.47e-08!165;CL:0000837!3.47e-08!165;CL:0000988!1.61e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.21e-11;33!CL:0002057;5.21e-11;33!CL:0000576;1.82e-09;48!CL:0000766;1.33e-08;69!CL:0000473;4.56e-08;39!CL:0000234;4.56e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.76e-18,72;CL:0000860,5.59e-16,42;CL:0002057,5.59e-16,42;CL:0000557,3.97e-15,67;CL:0000473,2.85e-14,48;CL:0000234,2.85e-14,48;CL:0000738,3.96e-14,136;CL:0002009,1.18e-13,61;CL:0000839,2.62e-13,66;CL:0002194,8.82e-13,59;CL:0000576,8.82e-13,59;CL:0000040,8.82e-13,59;CL:0000559,8.82e-13,59;CL:0000763,3.81e-11,108;CL:0000049,3.81e-11,108;CL:0002031,4.25e-10,120;CL:0000037,1.27e-09,168;CL:0002087,2.75e-09,115;CL:0002032,7.52e-09,161;CL:0000837,7.52e-09,161;CL:0000988,2.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.37e-32!115;UBERON:0001049!1.99e-20!57;UBERON:0005068!1.99e-20!57;UBERON:0006241!1.99e-20!57;UBERON:0007135!1.99e-20!57;UBERON:0002616!4.61e-17!59;UBERON:0001017!2.44e-16!82;UBERON:0005743!2.89e-15!86;UBERON:0002780!5.55e-15!41;UBERON:0001890!5.55e-15!41;UBERON:0006240!5.55e-15!41;UBERON:0003080!5.63e-15!42;UBERON:0000073!1.07e-14!94;UBERON:0001016!1.07e-14!94;UBERON:0000955!2.31e-14!69;UBERON:0006238!2.31e-14!69;UBERON:0002346!1.44e-13!90;UBERON:0002020!5.85e-13!34;UBERON:0003528!5.85e-13!34;UBERON:0001893!6.02e-13!34;UBERON:0002791!1.31e-12!33;UBERON:0003075!2.75e-12!86;UBERON:0007284!2.75e-12!86;UBERON:0001869!5.33e-12!32;UBERON:0002390!8.86e-12!102;UBERON:0003061!8.86e-12!102;UBERON:0002619!2.73e-11!22;UBERON:0001950!1.32e-10!20;UBERON:0002193!5.30e-10!112;UBERON:0002371!1.76e-09!80;UBERON:0000956!1.81e-09!25;UBERON:0000203!1.81e-09!25;UBERON:0001474!4.85e-09!86;UBERON:0003056!1.88e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.20e-11;53!UBERON:0002616;1.20e-11;53!UBERON:0002619;2.40e-11;22!UBERON:0002780;2.56e-11;41!UBERON:0001890;2.56e-11;41!UBERON:0003528;2.79e-11;34!UBERON:0002020;2.79e-11;34!UBERON:0001893;3.90e-11;34!UBERON:0002791;6.64e-11;32!UBERON:0001869;6.64e-11;32!UBERON:0001950;1.18e-10;20!UBERON:0007023;1.57e-09;114!UBERON:0000956;1.57e-09;25!UBERON:0000203;1.57e-09;25!UBERON:0001017;1.20e-07;75!UBERON:0001016;3.64e-07;83!UBERON:0000955;4.36e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.68e-31,114;UBERON:0001049,1.77e-20,56;UBERON:0005068,1.77e-20,56;UBERON:0006241,1.77e-20,56;UBERON:0007135,1.77e-20,56;UBERON:0000073,5.25e-19,53;UBERON:0002616,5.25e-19,53;UBERON:0001017,2.61e-16,81;UBERON:0001016,1.29e-15,89;UBERON:0002780,5.14e-15,41;UBERON:0001890,5.14e-15,41;UBERON:0003080,5.14e-15,41;UBERON:0006240,5.14e-15,41;UBERON:0000955,2.46e-14,68;UBERON:0006238,2.46e-14,68;UBERON:0002346,1.80e-13,86;UBERON:0002390,4.61e-13,98;UBERON:0003061,4.61e-13,98;UBERON:0003528,5.48e-13,34;UBERON:0002020,5.48e-13,34;UBERON:0001893,5.64e-13,34;UBERON:0003075,3.52e-12,82;UBERON:0007284,3.52e-12,82;UBERON:0002791,4.52e-12,32;UBERON:0001869,5.02e-12,32;UBERON:0002619,2.58e-11,22;UBERON:0002193,3.69e-11,108;UBERON:0002371,8.91e-11,76;UBERON:0001950,1.25e-10,20;UBERON:0001474,3.19e-10,82;UBERON:0000956,1.73e-09,25;UBERON:0000203,1.73e-09,25;UBERON:0002405,8.69e-09,93;UBERON:0003056,1.00e-07,61;UBERON:0010371,1.42e-07,104;UBERON:0004765,8.57e-07,90;UBERON:0003076,9.84e-07,15;UBERON:0003057,9.84e-07,15 | |||
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| |||
|short_description=p1@CSAD | |||
}} |
Latest revision as of 01:57, 19 September 2015
Short description: | p1@CSAD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSAD_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000379843, ENST00000437073, ENST00000453446, NM_015989, uc001sby.2, uc001sca.3, uc010snx.1_5end |
EntrezGene: | CSAD |
HGNC: | 18966 |
UniProt: | E9PFW9Q9Y600 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.76e-18 | 72 |
classical monocyte | 5.59e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.59e-16 | 42 |
granulocyte monocyte progenitor cell | 3.97e-15 | 67 |
defensive cell | 2.85e-14 | 48 |
phagocyte | 2.85e-14 | 48 |
leukocyte | 3.96e-14 | 136 |
macrophage dendritic cell progenitor | 1.18e-13 | 61 |
myeloid lineage restricted progenitor cell | 2.62e-13 | 66 |
monopoietic cell | 8.82e-13 | 59 |
monocyte | 8.82e-13 | 59 |
monoblast | 8.82e-13 | 59 |
promonocyte | 8.82e-13 | 59 |
myeloid cell | 3.81e-11 | 108 |
common myeloid progenitor | 3.81e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 4.25e-10 | 120 |
hematopoietic stem cell | 1.27e-09 | 168 |
nongranular leukocyte | 2.75e-09 | 115 |
hematopoietic oligopotent progenitor cell | 7.52e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.52e-09 | 161 |
hematopoietic cell | 2.65e-08 | 177 |