FFCP PHASE1:Hg19::chrX:110924510..110924524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79868 | |EntrezGene=79868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30881 | |HGNC=30881 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=46bp_to_ENST00000468657,ENST00000471924_5end | |association_with_transcript=46bp_to_ENST00000468657,ENST00000471924_5end | ||
|cluster_id=chrX:110924510..110924524,+ | |||
|coexpression_cluster_id=C23 | |coexpression_cluster_id=C23 | ||
|description=CAGE_peak_4_at_ALG13_5end | |description=CAGE_peak_4_at_ALG13_5end | ||
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|ontology_enrichment_celltype=CL:0000738!3.98e-30!140;CL:0002031!1.13e-25!124;CL:0002087!5.52e-25!119;CL:0000037!1.02e-23!172;CL:0000566!1.02e-23!172;CL:0000860!1.11e-23!45;CL:0002057!1.35e-22!42;CL:0000988!3.68e-22!182;CL:0002032!1.54e-20!165;CL:0000837!1.54e-20!165;CL:0000766!5.16e-15!76;CL:0000557!1.17e-14!71;CL:0000839!9.27e-13!70;CL:0000838!2.33e-12!52;CL:0002009!3.27e-12!65;CL:0000542!3.71e-12!53;CL:0000051!3.71e-12!53;CL:0002194!1.63e-11!63;CL:0000576!1.63e-11!63;CL:0000040!1.63e-11!63;CL:0000559!1.63e-11!63;CL:0000763!1.68e-09!112;CL:0000049!1.68e-09!112;CL:0000791!6.61e-09!18;CL:0000789!6.61e-09!18;CL:0002420!6.61e-09!18;CL:0002419!6.61e-09!18;CL:0000790!6.61e-09!18;CL:0000084!1.36e-07!25;CL:0000827!1.36e-07!25;CL:0000236!2.62e-07!14 | |ontology_enrichment_celltype=CL:0000738!3.98e-30!140;CL:0002031!1.13e-25!124;CL:0002087!5.52e-25!119;CL:0000037!1.02e-23!172;CL:0000566!1.02e-23!172;CL:0000860!1.11e-23!45;CL:0002057!1.35e-22!42;CL:0000988!3.68e-22!182;CL:0002032!1.54e-20!165;CL:0000837!1.54e-20!165;CL:0000766!5.16e-15!76;CL:0000557!1.17e-14!71;CL:0000839!9.27e-13!70;CL:0000838!2.33e-12!52;CL:0002009!3.27e-12!65;CL:0000542!3.71e-12!53;CL:0000051!3.71e-12!53;CL:0002194!1.63e-11!63;CL:0000576!1.63e-11!63;CL:0000040!1.63e-11!63;CL:0000559!1.63e-11!63;CL:0000763!1.68e-09!112;CL:0000049!1.68e-09!112;CL:0000791!6.61e-09!18;CL:0000789!6.61e-09!18;CL:0002420!6.61e-09!18;CL:0002419!6.61e-09!18;CL:0000790!6.61e-09!18;CL:0000084!1.36e-07!25;CL:0000827!1.36e-07!25;CL:0000236!2.62e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.09e-30;33!CL:0002057;4.09e-30;33!CL:0000576;1.10e-21;48!CL:0000473;5.31e-20;39!CL:0000234;5.31e-20;39!CL:0000766;2.76e-18;69!CL:0002087;4.33e-15;104!CL:0000791;1.08e-11;18!CL:0000789;1.08e-11;18!CL:0002419;1.08e-11;18!CL:0000738;1.88e-11;136!CL:0000624;3.35e-10;6!CL:0000542;1.27e-08;53!CL:0000084;1.66e-08;25!CL:0002393;4.14e-08;6!CL:0002397;4.14e-08;6!CL:0000236;7.38e-08;13!CL:0000763;4.98e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;4.09e-30;33!CL:0002057;4.09e-30;33!CL:0000576;1.10e-21;48!CL:0000473;5.31e-20;39!CL:0000234;5.31e-20;39!CL:0000766;2.76e-18;69!CL:0002087;4.33e-15;104!CL:0000791;1.08e-11;18!CL:0000789;1.08e-11;18!CL:0002419;1.08e-11;18!CL:0000738;1.88e-11;136!CL:0000624;3.35e-10;6!CL:0000542;1.27e-08;53!CL:0000084;1.66e-08;25!CL:0002393;4.14e-08;6!CL:0002397;4.14e-08;6!CL:0000236;7.38e-08;13!CL:0000763;4.98e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.40e-53,136;CL:0002031,1.13e-44,120;CL:0002087,3.16e-44,115;CL:0000860,3.58e-44,42;CL:0002057,3.58e-44,42;CL:0000037,6.71e-41,168;CL:0000988,1.74e-38,177;CL:0000766,3.59e-37,72;CL:0000473,7.29e-37,48;CL:0000234,7.29e-37,48;CL:0002032,1.40e-35,161;CL:0000837,1.40e-35,161;CL:0000557,6.93e-34,67;CL:0000839,5.51e-31,66;CL:0002009,6.58e-29,61;CL:0002194,1.58e-28,59;CL:0000576,1.58e-28,59;CL:0000040,1.58e-28,59;CL:0000559,1.58e-28,59;CL:0000763,1.22e-21,108;CL:0000049,1.22e-21,108;CL:0000838,3.04e-13,52;CL:0000542,7.78e-13,53;CL:0000051,7.78e-13,53;CL:0000791,1.41e-11,18;CL:0000789,1.41e-11,18;CL:0002420,1.41e-11,18;CL:0002419,1.41e-11,18;CL:0000790,1.41e-11,18;CL:0002393,2.75e-11,9;CL:0002397,2.75e-11,9;CL:0000624,3.45e-10,6;CL:0000134,5.28e-09,354;CL:0000236,1.53e-08,14;CL:0002320,2.09e-08,361;CL:0000084,2.39e-08,25;CL:0000827,2.39e-08,25;CL:0000219,6.55e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;8.05e-31;42!CL:0000790;1.08e-11;18!CL:0000051;1.27e-08;53 | |ontology_enrichment_development_v019=CL:0002057;8.05e-31;42!CL:0000790;1.08e-11;18!CL:0000051;1.27e-08;53 | ||
|ontology_enrichment_disease=DOID:0050687!3.43e-07!143 | |ontology_enrichment_disease=DOID:0050687!3.43e-07!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!4.93e-14!86;UBERON:0002371!5.55e-13!80;UBERON:0002390!3.91e-11!102;UBERON:0003061!3.91e-11!102;UBERON:0004765!2.56e-10!101;UBERON:0001434!2.56e-10!101;UBERON:0002193!2.98e-08!112;UBERON:0002405!9.74e-07!115 | |ontology_enrichment_uberon=UBERON:0001474!4.93e-14!86;UBERON:0002371!5.55e-13!80;UBERON:0002390!3.91e-11!102;UBERON:0003061!3.91e-11!102;UBERON:0004765!2.56e-10!101;UBERON:0001434!2.56e-10!101;UBERON:0002193!2.98e-08!112;UBERON:0002405!9.74e-07!115 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p4@ALG13 | |short_description=p4@ALG13 | ||
}} | }} |
Latest revision as of 01:56, 19 September 2015
Short description: | p4@ALG13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ALG13_5end |
Coexpression cluster: | C23_CD4_CD8_Natural_Peripheral_Basophils_CD19_CD14 |
Association with transcript: | 46bp_to_ENST00000468657, ENST00000471924_5end |
EntrezGene: | ALG13 |
HGNC: | 30881 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-29 | 76 |
bone element | 1.15e-28 | 82 |
hematopoietic system | 4.83e-26 | 98 |
blood island | 4.83e-26 | 98 |
skeletal element | 1.07e-24 | 90 |
immune system | 9.06e-23 | 93 |
hemolymphoid system | 4.47e-22 | 108 |
skeletal system | 1.14e-20 | 100 |
connective tissue | 8.94e-09 | 371 |
musculoskeletal system | 2.31e-07 | 167 |