FFCP PHASE1:Hg19::chr19:48828647..48828658,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2014 | |EntrezGene=2014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3335 | |HGNC=3335 | ||
|TSSclassifier=strong | |||
|UniProt=P54852 | |UniProt=P54852 | ||
|association_with_transcript=18bp_to_ENST00000270221,NM_001425,uc002piv.2_5end | |association_with_transcript=18bp_to_ENST00000270221,NM_001425,uc002piv.2_5end | ||
|cluster_id=chr19:48828647..48828658,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_3_at_EMP3_5end | |description=CAGE_peak_3_at_EMP3_5end | ||
|id=chr19:48828647..48828658,+ | |id=chr19:48828647..48828658,+ | ||
|ontology_enrichment_celltype=CL:0000048!1.88e-46!430;CL:0000723!3.22e-45!436;CL:0000034!1.35e-44!444;CL:0002320!6.14e-40!365;CL:0000134!3.79e-38!358;CL:0000219!3.89e-33!390;CL:0002057!3.20e-28!42;CL:0000766!6.22e-28!76;CL:0002009!4.63e-26!65;CL:0000557!1.13e-25!71;CL:0000860!1.41e-25!45;CL:0002194!3.67e-25!63;CL:0000576!3.67e-25!63;CL:0000040!3.67e-25!63;CL:0000559!3.67e-25!63;CL:0000738!4.83e-25!140;CL:0000839!8.31e-24!70;CL:0000763!1.70e-21!112;CL:0000049!1.70e-21!112;CL:0000037!3.06e-21!172;CL:0000566!3.06e-21!172;CL:0000988!4.08e-21!182;CL:0002087!1.71e-20!119;CL:0002031!8.91e-20!124;CL:0002371!9.77e-20!591;CL:0002032!1.24e-19!165;CL:0000837!1.24e-19!165;CL:0000144!7.71e-18!625;CL:0000055!7.03e-11!180;CL:0000012!9.49e-09!682;CL:0000192!3.95e-08!42;CL:0000514!3.95e-08!42;CL:0000548!4.31e-08!679;CL:0000004!4.31e-08!679;CL:0000255!4.31e-08!679;CL:0000003!2.03e-07!722;CL:0000680!2.64e-07!57;CL:0000056!2.64e-07!57;CL:0000355!2.64e-07!57;CL:0002393!2.77e-07!9;CL:0002397!2.77e-07!9;CL:0000359!3.13e-07!32;CL:0000183!4.37e-07!59 | |ontology_enrichment_celltype=CL:0000048!1.88e-46!430;CL:0000723!3.22e-45!436;CL:0000034!1.35e-44!444;CL:0002320!6.14e-40!365;CL:0000134!3.79e-38!358;CL:0000219!3.89e-33!390;CL:0002057!3.20e-28!42;CL:0000766!6.22e-28!76;CL:0002009!4.63e-26!65;CL:0000557!1.13e-25!71;CL:0000860!1.41e-25!45;CL:0002194!3.67e-25!63;CL:0000576!3.67e-25!63;CL:0000040!3.67e-25!63;CL:0000559!3.67e-25!63;CL:0000738!4.83e-25!140;CL:0000839!8.31e-24!70;CL:0000763!1.70e-21!112;CL:0000049!1.70e-21!112;CL:0000037!3.06e-21!172;CL:0000566!3.06e-21!172;CL:0000988!4.08e-21!182;CL:0002087!1.71e-20!119;CL:0002031!8.91e-20!124;CL:0002371!9.77e-20!591;CL:0002032!1.24e-19!165;CL:0000837!1.24e-19!165;CL:0000144!7.71e-18!625;CL:0000055!7.03e-11!180;CL:0000012!9.49e-09!682;CL:0000192!3.95e-08!42;CL:0000514!3.95e-08!42;CL:0000548!4.31e-08!679;CL:0000004!4.31e-08!679;CL:0000255!4.31e-08!679;CL:0000003!2.03e-07!722;CL:0000680!2.64e-07!57;CL:0000056!2.64e-07!57;CL:0000355!2.64e-07!57;CL:0002393!2.77e-07!9;CL:0002397!2.77e-07!9;CL:0000359!3.13e-07!32;CL:0000183!4.37e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-25;33!CL:0002057;1.32e-25;33!CL:0000473;7.35e-23;39!CL:0000234;7.35e-23;39!CL:0000576;5.37e-22;48!CL:0000766;3.46e-17;69!CL:0000763;6.21e-09;100!CL:0002087;6.31e-08;104!CL:0000738;8.37e-08;136!CL:0000219;3.26e-07;193!CL:0000236;3.83e-07;13!CL:0000359;4.03e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.49e-43,427;CL:0000723,7.27e-42,433;CL:0000034,1.09e-41,441;CL:0000473,6.94e-37,48;CL:0000234,6.94e-37,48;CL:0000766,8.99e-37,72;CL:0002320,3.34e-36,361;CL:0000860,2.00e-35,42;CL:0002057,2.00e-35,42;CL:0002009,2.20e-35,61;CL:0000134,3.91e-35,354;CL:0000557,2.84e-34,67;CL:0002194,3.10e-34,59;CL:0000576,3.10e-34,59;CL:0000040,3.10e-34,59;CL:0000559,3.10e-34,59;CL:0000839,3.37e-32,66;CL:0000219,2.34e-30,386;CL:0000738,1.93e-29,136;CL:0002087,2.25e-24,115;CL:0000763,6.80e-24,108;CL:0000049,6.80e-24,108;CL:0002031,1.64e-23,120;CL:0000988,1.10e-22,177;CL:0000037,4.39e-22,168;CL:0002032,6.01e-20,161;CL:0000837,6.01e-20,161;CL:0002393,7.93e-09,9;CL:0002397,7.93e-09,9;CL:0000192,7.85e-08,43;CL:0000514,7.85e-08,43;CL:0000359,2.63e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-25;42!CL:0000049;5.80e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.82e-40!375;UBERON:0002204!1.74e-33!167;UBERON:0002371!4.18e-27!80;UBERON:0002390!4.06e-26!102;UBERON:0003061!4.06e-26!102;UBERON:0004765!5.28e-26!101;UBERON:0001434!5.28e-26!101;UBERON:0001474!2.18e-25!86;UBERON:0002193!8.62e-23!112;UBERON:0003081!1.75e-20!216;UBERON:0002405!2.28e-15!115;UBERON:0000914!4.11e-07!83;UBERON:0002329!4.11e-07!83;UBERON:0003077!4.11e-07!83;UBERON:0003059!4.11e-07!83;UBERON:0007282!4.11e-07!83;UBERON:0009618!4.11e-07!83;UBERON:0007285!4.11e-07!83;UBERON:0000926!5.98e-07!448;UBERON:0004120!5.98e-07!448;UBERON:0006603!5.98e-07!448;UBERON:0001134!6.82e-07!61;UBERON:0002036!6.82e-07!61;UBERON:0003082!6.82e-07!61;UBERON:0002385!8.90e-07!63;UBERON:0001015!8.90e-07!63;UBERON:0000383!8.90e-07!63 | |ontology_enrichment_uberon=UBERON:0002384!1.82e-40!375;UBERON:0002204!1.74e-33!167;UBERON:0002371!4.18e-27!80;UBERON:0002390!4.06e-26!102;UBERON:0003061!4.06e-26!102;UBERON:0004765!5.28e-26!101;UBERON:0001434!5.28e-26!101;UBERON:0001474!2.18e-25!86;UBERON:0002193!8.62e-23!112;UBERON:0003081!1.75e-20!216;UBERON:0002405!2.28e-15!115;UBERON:0000914!4.11e-07!83;UBERON:0002329!4.11e-07!83;UBERON:0003077!4.11e-07!83;UBERON:0003059!4.11e-07!83;UBERON:0007282!4.11e-07!83;UBERON:0009618!4.11e-07!83;UBERON:0007285!4.11e-07!83;UBERON:0000926!5.98e-07!448;UBERON:0004120!5.98e-07!448;UBERON:0006603!5.98e-07!448;UBERON:0001134!6.82e-07!61;UBERON:0002036!6.82e-07!61;UBERON:0003082!6.82e-07!61;UBERON:0002385!8.90e-07!63;UBERON:0001015!8.90e-07!63;UBERON:0000383!8.90e-07!63 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p3@EMP3 | |short_description=p3@EMP3 | ||
}} | }} |
Latest revision as of 01:52, 19 September 2015
Short description: | p3@EMP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EMP3_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 18bp_to_ENST00000270221, NM_001425, uc002piv.2_5end |
EntrezGene: | EMP3 |
HGNC: | 3335 |
UniProt: | P54852 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.32e-37 | 371 |
bone marrow | 2.46e-35 | 76 |
musculoskeletal system | 2.73e-35 | 167 |
bone element | 9.42e-33 | 82 |
hematopoietic system | 2.03e-32 | 98 |
blood island | 2.03e-32 | 98 |
skeletal system | 7.93e-31 | 100 |
skeletal element | 1.47e-30 | 90 |
hemolymphoid system | 4.68e-28 | 108 |
lateral plate mesoderm | 8.21e-27 | 203 |
immune system | 3.68e-25 | 93 |
mesoderm | 2.24e-21 | 315 |
mesoderm-derived structure | 2.24e-21 | 315 |
presumptive mesoderm | 2.24e-21 | 315 |