FFCP PHASE1:Hg19::chrX:110924390..110924467,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79868 | |EntrezGene=79868 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30881 | |HGNC=30881 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NP73,D6RE84,D6RD27 | |UniProt=Q9NP73,D6RE84,D6RD27 | ||
|association_with_transcript=0bp_to_ENST00000394780,ENST00000468657,ENST00000471924,ENST00000473389,ENST00000482374,ENST00000486353,ENST00000489033,ENST00000492038,ENST00000495283,NR_033127,NR_033128,NR_033129,NR_033131,NR_033134,uc004epi.1,uc011msw.1,uc011msx.1,uc011msy.1,uc011msz.1,uc011mta.1,uc011mtb.1_5end | |association_with_transcript=0bp_to_ENST00000394780,ENST00000468657,ENST00000471924,ENST00000473389,ENST00000482374,ENST00000486353,ENST00000489033,ENST00000492038,ENST00000495283,NR_033127,NR_033128,NR_033129,NR_033131,NR_033134,uc004epi.1,uc011msw.1,uc011msx.1,uc011msy.1,uc011msz.1,uc011mta.1,uc011mtb.1_5end | ||
|cluster_id=chrX:110924390..110924467,+ | |||
|description=CAGE_peak_1_at_ALG13_5end | |description=CAGE_peak_1_at_ALG13_5end | ||
|id=chrX:110924390..110924467,+ | |id=chrX:110924390..110924467,+ | ||
|ontology_enrichment_celltype=CL:0002031!7.67e-35!124;CL:0000738!8.47e-33!140;CL:0002087!1.59e-32!119;CL:0000037!1.95e-26!172;CL:0000566!1.95e-26!172;CL:0002032!6.71e-25!165;CL:0000837!6.71e-25!165;CL:0000988!8.87e-24!182;CL:0000557!6.76e-21!71;CL:0000839!2.81e-20!70;CL:0002009!2.35e-18!65;CL:0002194!7.66e-18!63;CL:0000576!7.66e-18!63;CL:0000040!7.66e-18!63;CL:0000559!7.66e-18!63;CL:0000860!2.40e-17!45;CL:0000766!2.51e-17!76;CL:0002057!1.98e-16!42;CL:0000542!1.05e-13!53;CL:0000051!1.05e-13!53;CL:0000838!1.45e-13!52;CL:0000763!7.01e-12!112;CL:0000049!7.01e-12!112;CL:0000236!6.39e-09!14;CL:0000945!1.15e-08!24;CL:0000826!1.15e-08!24;CL:0000791!1.38e-08!18;CL:0000789!1.38e-08!18;CL:0002420!1.38e-08!18;CL:0002419!1.38e-08!18;CL:0000790!1.38e-08!18 | |ontology_enrichment_celltype=CL:0002031!7.67e-35!124;CL:0000738!8.47e-33!140;CL:0002087!1.59e-32!119;CL:0000037!1.95e-26!172;CL:0000566!1.95e-26!172;CL:0002032!6.71e-25!165;CL:0000837!6.71e-25!165;CL:0000988!8.87e-24!182;CL:0000557!6.76e-21!71;CL:0000839!2.81e-20!70;CL:0002009!2.35e-18!65;CL:0002194!7.66e-18!63;CL:0000576!7.66e-18!63;CL:0000040!7.66e-18!63;CL:0000559!7.66e-18!63;CL:0000860!2.40e-17!45;CL:0000766!2.51e-17!76;CL:0002057!1.98e-16!42;CL:0000542!1.05e-13!53;CL:0000051!1.05e-13!53;CL:0000838!1.45e-13!52;CL:0000763!7.01e-12!112;CL:0000049!7.01e-12!112;CL:0000236!6.39e-09!14;CL:0000945!1.15e-08!24;CL:0000826!1.15e-08!24;CL:0000791!1.38e-08!18;CL:0000789!1.38e-08!18;CL:0002420!1.38e-08!18;CL:0002419!1.38e-08!18;CL:0000790!1.38e-08!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.92e-14;33!CL:0002057;7.92e-14;33!CL:0000576;8.59e-12;48!CL:0000473;4.82e-11;39!CL:0000234;4.82e-11;39!CL:0002087;1.95e-10;104!CL:0000945;1.14e-08;24!CL:0000791;1.40e-08;18!CL:0000789;1.40e-08;18!CL:0002419;1.40e-08;18!CL:0000236;1.71e-08;13!CL:0000542;1.78e-08;53!CL:0000766;3.40e-08;69!CL:0000738;3.46e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,4.52e-34,120;CL:0000738,5.49e-32,136;CL:0002087,9.13e-32,115;CL:0000037,1.30e-25,168;CL:0002032,4.29e-24,161;CL:0000837,4.29e-24,161;CL:0000988,1.44e-23,177;CL:0000557,2.94e-20,67;CL:0000839,1.22e-19,66;CL:0002009,1.01e-17,61;CL:0002194,3.27e-17,59;CL:0000576,3.27e-17,59;CL:0000040,3.27e-17,59;CL:0000559,3.27e-17,59;CL:0000766,1.19e-16,72;CL:0000860,1.98e-16,42;CL:0002057,1.98e-16,42;CL:0000473,9.52e-16,48;CL:0000234,9.52e-16,48;CL:0000542,1.05e-13,53;CL:0000051,1.05e-13,53;CL:0000838,1.45e-13,52;CL:0000763,3.17e-11,108;CL:0000049,3.17e-11,108;CL:0000236,6.39e-09,14;CL:0000945,1.15e-08,24;CL:0000826,1.15e-08,24;CL:0000791,1.38e-08,18;CL:0000789,1.38e-08,18;CL:0002420,1.38e-08,18;CL:0002419,1.38e-08,18;CL:0000790,1.38e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002057;5.12e-12;42!CL:0000790;1.40e-08;18!CL:0000051;1.78e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-21!102;UBERON:0003061!2.51e-21!102;UBERON:0001474!7.43e-19!86;UBERON:0002193!1.44e-18!112;UBERON:0002371!1.68e-18!80;UBERON:0004765!1.02e-15!101;UBERON:0001434!1.02e-15!101;UBERON:0002405!3.19e-14!115;UBERON:0007023!3.37e-07!115;UBERON:0001737!7.60e-07!9 | |ontology_enrichment_uberon=UBERON:0002390!2.51e-21!102;UBERON:0003061!2.51e-21!102;UBERON:0001474!7.43e-19!86;UBERON:0002193!1.44e-18!112;UBERON:0002371!1.68e-18!80;UBERON:0004765!1.02e-15!101;UBERON:0001434!1.02e-15!101;UBERON:0002405!3.19e-14!115;UBERON:0007023!3.37e-07!115;UBERON:0001737!7.60e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.54e-07;9!UBERON:0001557;7.54e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.33e-20,98;UBERON:0003061,1.33e-20,98;UBERON:0001474,3.70e-18,82;UBERON:0002193,7.66e-18,108;UBERON:0002371,8.13e-18,76;UBERON:0002405,3.77e-16,93;UBERON:0004765,7.07e-15,90;UBERON:0001434,1.67e-13,100;UBERON:0007023,4.84e-07,114;UBERON:0001737,7.60e-07,9 | |||
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| ||
|short_description=p1@ALG13 | |short_description=p1@ALG13 | ||
}} | }} |
Latest revision as of 01:51, 19 September 2015
Short description: | p1@ALG13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALG13_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000394780, ENST00000468657, ENST00000471924, ENST00000473389, ENST00000482374, ENST00000486353, ENST00000489033, ENST00000492038, ENST00000495283, NR_033127, NR_033128, NR_033129, NR_033131, NR_033134, uc004epi.1, uc011msw.1, uc011msx.1, uc011msy.1, uc011msz.1, uc011mta.1, uc011mtb.1_5end |
EntrezGene: | ALG13 |
HGNC: | 30881 |
UniProt: | Q9NP73D6RE84D6RD27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.33e-20 | 98 |
blood island | 1.33e-20 | 98 |
bone element | 3.70e-18 | 82 |
hemolymphoid system | 7.66e-18 | 108 |
bone marrow | 8.13e-18 | 76 |
immune system | 3.77e-16 | 93 |
skeletal element | 7.07e-15 | 90 |
skeletal system | 1.67e-13 | 100 |
adult organism | 4.84e-07 | 114 |
larynx | 7.60e-07 | 9 |